EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000037219 (Gene tree)
Gene ID: 105883540
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 43471 bases
Position: chr16:32147450-32190920
Accession: 105883540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000029593	AD	PF09793.9	2.7e-24	1	1
ENSMICP00000002372	AD	PF09793.9	3.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000052578	LSM12-201	3918	XM_012786692	ENSMICP00000029593	195 (aa)	XP_012642146	UPI0002382854
ENSMICT00000002600	LSM12-202	414	-	ENSMICP00000002372	137 (aa)	-	UPI00085AFDE7

Gene Model

Click here to download ENSMICG00000037219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000037219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000037219	LSM12	100	99.487	ENSG00000161654	LSM12	100	99.487	Homo_sapiens
ENSMICG00000037219	LSM12	100	86.735	ENSAPOG00000007907	lsm12b	100	86.735	Acanthochromis_polyacanthus
ENSMICG00000037219	LSM12	100	99.083	ENSAMEG00000018321	LSM12	100	97.475	Ailuropoda_melanoleuca
ENSMICG00000037219	LSM12	100	84.694	ENSACIG00000008538	lsm12b	100	84.694	Amphilophus_citrinellus
ENSMICG00000037219	LSM12	100	86.224	ENSAOCG00000021847	lsm12b	88	86.224	Amphiprion_ocellaris
ENSMICG00000037219	LSM12	100	86.224	ENSAPEG00000002252	lsm12b	100	86.224	Amphiprion_percula
ENSMICG00000037219	LSM12	100	85.714	ENSATEG00000005705	lsm12b	100	85.714	Anabas_testudineus
ENSMICG00000037219	LSM12	99	93.264	ENSACAG00000004618	LSM12	99	93.264	Anolis_carolinensis
ENSMICG00000037219	LSM12	100	99.487	ENSANAG00000029011	LSM12	100	99.487	Aotus_nancymaae
ENSMICG00000037219	LSM12	100	85.204	ENSACLG00000026332	lsm12b	100	85.204	Astatotilapia_calliptera
ENSMICG00000037219	LSM12	100	84.694	ENSAMXG00000032952	lsm12b	100	84.694	Astyanax_mexicanus
ENSMICG00000037219	LSM12	100	81.081	ENSAMXG00000036117	lsm12a	91	78.571	Astyanax_mexicanus
ENSMICG00000037219	LSM12	100	99.487	ENSBTAG00000016252	LSM12	100	99.487	Bos_taurus
ENSMICG00000037219	LSM12	100	99.487	ENSCJAG00000048480	LSM12	100	99.487	Callithrix_jacchus
ENSMICG00000037219	LSM12	100	99.487	ENSCAFG00000014379	LSM12	92	99.487	Canis_familiaris
ENSMICG00000037219	LSM12	100	99.487	ENSCAFG00020012173	LSM12	100	99.487	Canis_lupus_dingo
ENSMICG00000037219	LSM12	100	99.487	ENSCHIG00000018175	LSM12	100	99.487	Capra_hircus
ENSMICG00000037219	LSM12	100	99.487	ENSTSYG00000036361	LSM12	100	99.487	Carlito_syrichta
ENSMICG00000037219	LSM12	83	93.827	ENSCAPG00000009647	LSM12	89	93.827	Cavia_aperea
ENSMICG00000037219	LSM12	100	97.436	ENSCPOG00000012860	LSM12	100	97.436	Cavia_porcellus
ENSMICG00000037219	LSM12	100	99.487	ENSCCAG00000032905	LSM12	100	99.487	Cebus_capucinus
ENSMICG00000037219	LSM12	100	99.487	ENSCATG00000030577	-	100	99.487	Cercocebus_atys
ENSMICG00000037219	LSM12	100	98.462	ENSCLAG00000015759	LSM12	100	98.462	Chinchilla_lanigera
ENSMICG00000037219	LSM12	100	100.000	ENSCSAG00000003486	LSM12	100	100.000	Chlorocebus_sabaeus
ENSMICG00000037219	LSM12	80	98.165	ENSCHOG00000001198	LSM12	100	98.165	Choloepus_hoffmanni
ENSMICG00000037219	LSM12	99	93.782	ENSCPBG00000027105	LSM12	99	93.782	Chrysemys_picta_bellii
ENSMICG00000037219	LSM12	100	99.487	ENSCANG00000043328	LSM12	100	99.487	Colobus_angolensis_palliatus
ENSMICG00000037219	LSM12	100	99.487	ENSCGRG00001002094	Lsm12	100	99.487	Cricetulus_griseus_chok1gshd
ENSMICG00000037219	LSM12	80	99.083	ENSCGRG00000004316	Lsm12	95	92.262	Cricetulus_griseus_crigri
ENSMICG00000037219	LSM12	100	85.204	ENSCSEG00000008434	lsm12b	100	85.204	Cynoglossus_semilaevis
ENSMICG00000037219	LSM12	100	86.364	ENSCVAG00000008755	lsm12b	100	85.204	Cyprinodon_variegatus
ENSMICG00000037219	LSM12	100	76.531	ENSDARG00000028848	lsm12a	100	76.531	Danio_rerio
ENSMICG00000037219	LSM12	100	85.204	ENSDARG00000109510	lsm12b	100	85.204	Danio_rerio
ENSMICG00000037219	LSM12	100	98.974	ENSDNOG00000002418	LSM12	91	98.974	Dasypus_novemcinctus
ENSMICG00000037219	LSM12	100	99.487	ENSDORG00000016381	Lsm12	100	99.487	Dipodomys_ordii
ENSMICG00000037219	LSM12	74	31.646	FBgn0036057	CG14164	83	31.646	Drosophila_melanogaster
ENSMICG00000037219	LSM12	83	33.133	FBgn0030364	Lsm12	76	32.934	Drosophila_melanogaster
ENSMICG00000037219	LSM12	90	87.429	ENSETEG00000011012	-	100	87.429	Echinops_telfairi
ENSMICG00000037219	LSM12	100	99.083	ENSETEG00000008374	LSM12	100	98.974	Echinops_telfairi
ENSMICG00000037219	LSM12	84	63.415	ENSEBUG00000016299	lsm12a	92	63.415	Eptatretus_burgeri
ENSMICG00000037219	LSM12	100	99.487	ENSEASG00005010155	LSM12	100	99.487	Equus_asinus_asinus
ENSMICG00000037219	LSM12	100	99.487	ENSECAG00000009071	LSM12	100	99.487	Equus_caballus
ENSMICG00000037219	LSM12	81	95.495	ENSEEUG00000002419	-	100	98.039	Erinaceus_europaeus
ENSMICG00000037219	LSM12	100	84.694	ENSELUG00000015538	lsm12b	100	80.102	Esox_lucius
ENSMICG00000037219	LSM12	100	82.653	ENSELUG00000000256	-	100	82.653	Esox_lucius
ENSMICG00000037219	LSM12	100	99.487	ENSFCAG00000037021	LSM12	100	99.487	Felis_catus
ENSMICG00000037219	LSM12	81	96.396	ENSFDAG00000008954	LSM12	87	98.649	Fukomys_damarensis
ENSMICG00000037219	LSM12	100	85.455	ENSFHEG00000019913	lsm12b	100	84.184	Fundulus_heteroclitus
ENSMICG00000037219	LSM12	81	85.586	ENSGMOG00000015449	lsm12b	100	84.810	Gadus_morhua
ENSMICG00000037219	LSM12	80	91.743	ENSGALG00000039803	LSM12	100	93.464	Gallus_gallus
ENSMICG00000037219	LSM12	100	86.364	ENSGAFG00000011829	lsm12b	100	84.694	Gambusia_affinis
ENSMICG00000037219	LSM12	81	85.586	ENSGACG00000003428	lsm12b	100	85.443	Gasterosteus_aculeatus
ENSMICG00000037219	LSM12	99	93.782	ENSGAGG00000021965	LSM12	99	93.782	Gopherus_agassizii
ENSMICG00000037219	LSM12	100	99.487	ENSGGOG00000010589	-	100	99.487	Gorilla_gorilla
ENSMICG00000037219	LSM12	85	85.629	ENSHBUG00000007667	lsm12b	74	85.629	Haplochromis_burtoni
ENSMICG00000037219	LSM12	100	99.487	ENSHGLG00000011411	LSM12	100	99.487	Heterocephalus_glaber_female
ENSMICG00000037219	LSM12	80	98.182	ENSHGLG00100000241	LSM12	96	86.740	Heterocephalus_glaber_male
ENSMICG00000037219	LSM12	100	84.694	ENSHCOG00000002094	lsm12b	100	84.694	Hippocampus_comes
ENSMICG00000037219	LSM12	99	77.778	ENSIPUG00000008936	lsm12a	99	75.773	Ictalurus_punctatus
ENSMICG00000037219	LSM12	100	85.204	ENSIPUG00000014800	lsm12	100	85.204	Ictalurus_punctatus
ENSMICG00000037219	LSM12	100	99.487	ENSSTOG00000007403	LSM12	100	99.487	Ictidomys_tridecemlineatus
ENSMICG00000037219	LSM12	81	84.906	ENSJJAG00000014652	-	95	84.906	Jaculus_jaculus
ENSMICG00000037219	LSM12	100	98.540	ENSJJAG00000004364	-	100	98.540	Jaculus_jaculus
ENSMICG00000037219	LSM12	97	87.368	ENSJJAG00000011793	-	100	87.368	Jaculus_jaculus
ENSMICG00000037219	LSM12	86	86.310	ENSKMAG00000007704	lsm12b	57	86.310	Kryptolebias_marmoratus
ENSMICG00000037219	LSM12	100	86.224	ENSLBEG00000027999	lsm12b	100	86.224	Labrus_bergylta
ENSMICG00000037219	LSM12	99	90.000	ENSLACG00000015981	LSM12	99	89.637	Latimeria_chalumnae
ENSMICG00000037219	LSM12	100	87.387	ENSLOCG00000013079	lsm12b	99	84.184	Lepisosteus_oculatus
ENSMICG00000037219	LSM12	100	99.487	ENSLAFG00000005202	LSM12	100	99.487	Loxodonta_africana
ENSMICG00000037219	LSM12	100	99.487	ENSMFAG00000031376	LSM12	100	99.487	Macaca_fascicularis
ENSMICG00000037219	LSM12	100	66.423	ENSMMUG00000038408	-	100	85.057	Macaca_mulatta
ENSMICG00000037219	LSM12	100	99.487	ENSMMUG00000006804	LSM12	100	99.487	Macaca_mulatta
ENSMICG00000037219	LSM12	100	67.153	ENSMMUG00000042106	-	100	85.057	Macaca_mulatta
ENSMICG00000037219	LSM12	100	99.487	ENSMNEG00000030594	-	100	99.487	Macaca_nemestrina
ENSMICG00000037219	LSM12	100	99.487	ENSMLEG00000039934	LSM12	100	99.487	Mandrillus_leucophaeus
ENSMICG00000037219	LSM12	100	85.714	ENSMAMG00000004279	lsm12b	100	85.714	Mastacembelus_armatus
ENSMICG00000037219	LSM12	100	85.204	ENSMZEG00005005754	lsm12b	100	85.204	Maylandia_zebra
ENSMICG00000037219	LSM12	100	99.487	ENSMOCG00000019878	-	100	99.487	Microtus_ochrogaster
ENSMICG00000037219	LSM12	100	83.590	ENSMOCG00000017015	-	86	83.590	Microtus_ochrogaster
ENSMICG00000037219	LSM12	100	85.714	ENSMMOG00000020848	lsm12b	100	85.714	Mola_mola
ENSMICG00000037219	LSM12	100	85.714	ENSMALG00000007578	lsm12b	100	85.714	Monopterus_albus
ENSMICG00000037219	LSM12	100	98.974	MGP_CAROLIEiJ_G0017241	Lsm12	100	98.974	Mus_caroli
ENSMICG00000037219	LSM12	100	99.487	ENSMUSG00000020922	Lsm12	100	99.487	Mus_musculus
ENSMICG00000037219	LSM12	100	99.270	MGP_PahariEiJ_G0018371	Lsm12	100	99.270	Mus_pahari
ENSMICG00000037219	LSM12	100	99.074	MGP_SPRETEiJ_G0018084	Lsm12	99	100.000	Mus_spretus
ENSMICG00000037219	LSM12	100	98.974	ENSMLUG00000006391	LSM12	100	98.974	Myotis_lucifugus
ENSMICG00000037219	LSM12	100	99.487	ENSNGAG00000001870	Lsm12	100	99.487	Nannospalax_galili
ENSMICG00000037219	LSM12	100	66.832	ENSNGAG00000015429	-	100	66.832	Nannospalax_galili
ENSMICG00000037219	LSM12	100	85.204	ENSNBRG00000006266	lsm12b	100	85.204	Neolamprologus_brichardi
ENSMICG00000037219	LSM12	100	99.487	ENSNLEG00000005580	-	100	99.487	Nomascus_leucogenys
ENSMICG00000037219	LSM12	85	98.182	ENSMEUG00000007501	-	100	98.182	Notamacropus_eugenii
ENSMICG00000037219	LSM12	100	99.487	ENSOPRG00000008552	LSM12	100	99.487	Ochotona_princeps
ENSMICG00000037219	LSM12	100	88.205	ENSODEG00000007886	-	74	88.205	Octodon_degus
ENSMICG00000037219	LSM12	100	97.949	ENSODEG00000017998	-	100	97.949	Octodon_degus
ENSMICG00000037219	LSM12	100	85.204	ENSONIG00000007933	lsm12b	100	85.204	Oreochromis_niloticus
ENSMICG00000037219	LSM12	54	95.946	ENSOANG00000031724	-	100	90.123	Ornithorhynchus_anatinus
ENSMICG00000037219	LSM12	99	92.784	ENSOCUG00000021254	-	100	92.784	Oryctolagus_cuniculus
ENSMICG00000037219	LSM12	100	99.083	ENSOCUG00000008566	-	100	97.475	Oryctolagus_cuniculus
ENSMICG00000037219	LSM12	99	92.784	ENSOCUG00000027889	-	100	92.784	Oryctolagus_cuniculus
ENSMICG00000037219	LSM12	99	91.753	ENSOCUG00000024823	-	100	91.753	Oryctolagus_cuniculus
ENSMICG00000037219	LSM12	100	85.714	ENSORLG00000011310	lsm12b	100	85.714	Oryzias_latipes
ENSMICG00000037219	LSM12	100	85.714	ENSORLG00020002060	lsm12b	92	85.714	Oryzias_latipes_hni
ENSMICG00000037219	LSM12	100	85.714	ENSORLG00015001647	lsm12b	92	85.714	Oryzias_latipes_hsok
ENSMICG00000037219	LSM12	100	86.364	ENSOMEG00000006184	lsm12b	92	85.714	Oryzias_melastigma
ENSMICG00000037219	LSM12	100	100.000	ENSOGAG00000010489	LSM12	100	100.000	Otolemur_garnettii
ENSMICG00000037219	LSM12	100	99.083	ENSOARG00000006589	LSM12	100	96.020	Ovis_aries
ENSMICG00000037219	LSM12	100	91.549	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSMICG00000037219	LSM12	100	99.487	ENSPPRG00000023420	LSM12	100	99.487	Panthera_pardus
ENSMICG00000037219	LSM12	100	97.810	ENSPTIG00000014850	-	100	97.810	Panthera_tigris_altaica
ENSMICG00000037219	LSM12	81	97.297	ENSPTIG00000012704	-	82	99.346	Panthera_tigris_altaica
ENSMICG00000037219	LSM12	100	99.487	ENSPTRG00000009261	LSM12	100	99.487	Pan_troglodytes
ENSMICG00000037219	LSM12	100	99.487	ENSPANG00000021315	-	100	99.487	Papio_anubis
ENSMICG00000037219	LSM12	100	85.714	ENSPKIG00000021058	lsm12b	100	85.714	Paramormyrops_kingsleyae
ENSMICG00000037219	LSM12	99	76.289	ENSPKIG00000017932	-	99	76.289	Paramormyrops_kingsleyae
ENSMICG00000037219	LSM12	100	85.204	ENSPMGG00000021344	lsm12b	100	85.204	Periophthalmus_magnuspinnatus
ENSMICG00000037219	LSM12	100	99.487	ENSPEMG00000012199	Lsm12	100	99.487	Peromyscus_maniculatus_bairdii
ENSMICG00000037219	LSM12	88	66.279	ENSPMAG00000005461	lsm12a	99	66.279	Petromyzon_marinus
ENSMICG00000037219	LSM12	100	96.410	ENSPCIG00000020244	LSM12	100	96.410	Phascolarctos_cinereus
ENSMICG00000037219	LSM12	100	85.586	ENSPFOG00000015930	lsm12b	100	83.673	Poecilia_formosa
ENSMICG00000037219	LSM12	100	85.586	ENSPLAG00000021089	lsm12b	100	83.673	Poecilia_latipinna
ENSMICG00000037219	LSM12	100	85.586	ENSPMEG00000012961	lsm12b	100	83.673	Poecilia_mexicana
ENSMICG00000037219	LSM12	88	85.965	ENSPREG00000010236	lsm12b	95	85.965	Poecilia_reticulata
ENSMICG00000037219	LSM12	100	99.487	ENSPPYG00000008344	LSM12	100	99.487	Pongo_abelii
ENSMICG00000037219	LSM12	82	99.371	ENSPCAG00000008790	LSM12	100	99.371	Procavia_capensis
ENSMICG00000037219	LSM12	100	99.487	ENSPCOG00000027951	LSM12	100	99.487	Propithecus_coquereli
ENSMICG00000037219	LSM12	100	98.974	ENSPVAG00000013706	LSM12	100	98.974	Pteropus_vampyrus
ENSMICG00000037219	LSM12	100	85.204	ENSPNYG00000003386	lsm12b	100	85.204	Pundamilia_nyererei
ENSMICG00000037219	LSM12	100	81.081	ENSPNAG00000018435	lsm12a	100	76.531	Pygocentrus_nattereri
ENSMICG00000037219	LSM12	100	84.545	ENSPNAG00000004186	lsm12b	100	83.163	Pygocentrus_nattereri
ENSMICG00000037219	LSM12	100	99.487	ENSRNOG00000020894	Lsm12	100	99.487	Rattus_norvegicus
ENSMICG00000037219	LSM12	100	99.487	ENSRBIG00000027910	LSM12	100	99.487	Rhinopithecus_bieti
ENSMICG00000037219	LSM12	100	99.487	ENSRROG00000045530	-	100	99.487	Rhinopithecus_roxellana
ENSMICG00000037219	LSM12	100	82.482	ENSRROG00000000537	-	100	82.482	Rhinopithecus_roxellana
ENSMICG00000037219	LSM12	77	33.051	YHR121W	-	61	33.051	Saccharomyces_cerevisiae
ENSMICG00000037219	LSM12	100	99.487	ENSSBOG00000025310	LSM12	100	99.487	Saimiri_boliviensis_boliviensis
ENSMICG00000037219	LSM12	81	93.694	ENSSHAG00000014914	LSM12	100	93.671	Sarcophilus_harrisii
ENSMICG00000037219	LSM12	100	85.714	ENSSFOG00015009612	lsm12	100	85.714	Scleropages_formosus
ENSMICG00000037219	LSM12	100	83.673	ENSSFOG00015020392	lsm12a	100	83.673	Scleropages_formosus
ENSMICG00000037219	LSM12	100	85.714	ENSSMAG00000008089	lsm12b	100	85.714	Scophthalmus_maximus
ENSMICG00000037219	LSM12	100	86.735	ENSSDUG00000012711	lsm12b	100	86.735	Seriola_dumerili
ENSMICG00000037219	LSM12	100	86.735	ENSSLDG00000007404	lsm12b	100	86.735	Seriola_lalandi_dorsalis
ENSMICG00000037219	LSM12	81	97.297	ENSSARG00000005537	LSM12	100	98.693	Sorex_araneus
ENSMICG00000037219	LSM12	100	94.495	ENSSPUG00000011984	LSM12	99	95.337	Sphenodon_punctatus
ENSMICG00000037219	LSM12	100	86.224	ENSSPAG00000017058	lsm12b	100	86.224	Stegastes_partitus
ENSMICG00000037219	LSM12	100	99.487	ENSSSCG00000032394	LSM12	100	99.487	Sus_scrofa
ENSMICG00000037219	LSM12	100	85.455	ENSTRUG00000007121	lsm12b	100	84.694	Takifugu_rubripes
ENSMICG00000037219	LSM12	100	85.455	ENSTNIG00000014436	lsm12b	100	85.204	Tetraodon_nigroviridis
ENSMICG00000037219	LSM12	100	98.974	ENSTBEG00000012523	-	100	98.974	Tupaia_belangeri
ENSMICG00000037219	LSM12	100	95.897	ENSTBEG00000012392	-	100	95.897	Tupaia_belangeri
ENSMICG00000037219	LSM12	100	99.487	ENSTTRG00000010433	LSM12	100	99.487	Tursiops_truncatus
ENSMICG00000037219	LSM12	100	99.487	ENSUAMG00000006313	LSM12	100	99.487	Ursus_americanus
ENSMICG00000037219	LSM12	81	97.297	ENSUMAG00000012987	LSM12	90	96.203	Ursus_maritimus
ENSMICG00000037219	LSM12	100	94.872	ENSVPAG00000011145	LSM12	100	94.872	Vicugna_pacos
ENSMICG00000037219	LSM12	100	99.487	ENSVVUG00000017581	LSM12	100	99.487	Vulpes_vulpes
ENSMICG00000037219	LSM12	80	83.486	ENSXETG00000003371	lsm12	77	65.000	Xenopus_tropicalis
ENSMICG00000037219	LSM12	100	86.364	ENSXCOG00000003994	lsm12b	100	84.694	Xiphophorus_couchianus
ENSMICG00000037219	LSM12	100	86.364	ENSXMAG00000020950	lsm12b	100	84.694	Xiphophorus_maculatus