EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000037883 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 1081 bases
Position: chr18:20792505-20793585
Accession: 105866008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000046000	La	PF05383.17	1.8e-19	1	1
ENSMICP00000033737	La	PF05383.17	2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000030382	-	1038	-	ENSMICP00000033737	345 (aa)	-	UPI00085B11C8
ENSMICT00000060397	-	930	-	ENSMICP00000046000	309 (aa)	-	UPI000C2ECF67

Gene Model

Click here to download ENSMICG00000037883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000037883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000037883	-	90	82.477	ENSMICG00000036111	LARP1B	98	82.779
ENSMICG00000037883	-	89	62.500	ENSMICG00000028052	-	63	62.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000037883	-	98	76.111	ENSG00000138709	LARP1B	99	76.389	Homo_sapiens
ENSMICG00000037883	-	90	78.248	ENSAMEG00000002748	LARP1B	98	78.248	Ailuropoda_melanoleuca
ENSMICG00000037883	-	97	62.575	ENSANAG00000034618	LARP1B	100	62.674	Aotus_nancymaae
ENSMICG00000037883	-	90	76.807	ENSBTAG00000012135	LARP1B	63	76.807	Bos_taurus
ENSMICG00000037883	-	90	77.644	ENSCJAG00000003338	LARP1B	98	77.946	Callithrix_jacchus
ENSMICG00000037883	-	88	85.315	ENSCAFG00020018899	LARP1B	98	85.315	Canis_lupus_dingo
ENSMICG00000037883	-	88	84.211	ENSCHIG00000023144	LARP1B	98	84.211	Capra_hircus
ENSMICG00000037883	-	97	71.831	ENSTSYG00000002037	-	98	79.021	Carlito_syrichta
ENSMICG00000037883	-	68	84.906	ENSCPOG00000034668	-	97	65.603	Cavia_porcellus
ENSMICG00000037883	-	97	74.860	ENSCCAG00000021948	LARP1B	98	77.644	Cebus_capucinus
ENSMICG00000037883	-	90	74.018	ENSCATG00000013541	LARP1B	98	74.320	Cercocebus_atys
ENSMICG00000037883	-	88	77.622	ENSCLAG00000006448	-	98	78.671	Chinchilla_lanigera
ENSMICG00000037883	-	95	83.713	ENSCANG00000026958	LARP1B	98	83.916	Colobus_angolensis_palliatus
ENSMICG00000037883	-	88	82.867	ENSCGRG00001004660	-	98	82.867	Cricetulus_griseus_chok1gshd
ENSMICG00000037883	-	88	82.517	ENSCGRG00000001914	-	98	82.517	Cricetulus_griseus_crigri
ENSMICG00000037883	-	93	74.716	ENSDNOG00000018765	-	67	75.287	Dasypus_novemcinctus
ENSMICG00000037883	-	88	85.664	ENSEASG00005018106	LARP1B	98	85.664	Equus_asinus_asinus
ENSMICG00000037883	-	90	78.852	ENSFCAG00000014650	-	98	78.852	Felis_catus
ENSMICG00000037883	-	97	76.536	ENSGGOG00000015900	LARP1B	99	76.816	Gorilla_gorilla
ENSMICG00000037883	-	90	64.798	ENSHGLG00000013922	-	96	63.863	Heterocephalus_glaber_female
ENSMICG00000037883	-	88	78.276	ENSHGLG00000006728	-	98	78.276	Heterocephalus_glaber_female
ENSMICG00000037883	-	90	64.798	ENSHGLG00100016491	-	96	63.863	Heterocephalus_glaber_male
ENSMICG00000037883	-	95	73.926	ENSHGLG00100014041	-	93	79.930	Heterocephalus_glaber_male
ENSMICG00000037883	-	88	81.533	ENSSTOG00000008596	-	98	81.533	Ictidomys_tridecemlineatus
ENSMICG00000037883	-	96	66.071	ENSSTOG00000034510	-	91	66.071	Ictidomys_tridecemlineatus
ENSMICG00000037883	-	71	75.325	ENSSTOG00000033183	-	93	74.439	Ictidomys_tridecemlineatus
ENSMICG00000037883	-	93	67.164	ENSSTOG00000021917	-	97	68.955	Ictidomys_tridecemlineatus
ENSMICG00000037883	-	88	79.225	ENSJJAG00000022360	Larp1b	98	79.649	Jaculus_jaculus
ENSMICG00000037883	-	91	58.702	ENSLACG00000015247	LARP1B	85	57.485	Latimeria_chalumnae
ENSMICG00000037883	-	90	79.819	ENSLAFG00000008473	-	99	79.819	Loxodonta_africana
ENSMICG00000037883	-	88	63.158	ENSMFAG00000003306	-	90	83.146	Macaca_fascicularis
ENSMICG00000037883	-	96	78.125	ENSMFAG00000002218	LARP1B	98	78.125	Macaca_fascicularis
ENSMICG00000037883	-	90	77.946	ENSMMUG00000021347	LARP1B	98	77.946	Macaca_mulatta
ENSMICG00000037883	-	65	87.500	ENSMNEG00000027747	-	87	87.179	Macaca_nemestrina
ENSMICG00000037883	-	75	46.690	ENSMZEG00005002545	larp1b	57	46.690	Maylandia_zebra
ENSMICG00000037883	-	88	81.818	ENSMAUG00000007879	-	98	81.818	Mesocricetus_auratus
ENSMICG00000037883	-	69	82.018	ENSMOCG00000001490	Larp1b	93	74.903	Microtus_ochrogaster
ENSMICG00000037883	-	88	80.769	MGP_CAROLIEiJ_G0024962	Larp1b	98	80.769	Mus_caroli
ENSMICG00000037883	-	88	81.818	ENSMUSG00000025762	Larp1b	98	81.818	Mus_musculus
ENSMICG00000037883	-	88	81.119	MGP_PahariEiJ_G0026403	Larp1b	98	81.119	Mus_pahari
ENSMICG00000037883	-	88	81.818	MGP_SPRETEiJ_G0025897	Larp1b	98	81.818	Mus_spretus
ENSMICG00000037883	-	90	77.039	ENSNLEG00000013819	LARP1B	98	77.341	Nomascus_leucogenys
ENSMICG00000037883	-	88	77.544	ENSODEG00000001292	-	98	78.322	Octodon_degus
ENSMICG00000037883	-	97	76.257	ENSPPAG00000030439	LARP1B	99	76.536	Pan_paniscus
ENSMICG00000037883	-	90	78.852	ENSPPRG00000002743	-	98	78.852	Panthera_pardus
ENSMICG00000037883	-	90	78.852	ENSPTIG00000011225	LARP1B	98	78.852	Panthera_tigris_altaica
ENSMICG00000037883	-	97	76.257	ENSPTRG00000016437	LARP1B	99	76.257	Pan_troglodytes
ENSMICG00000037883	-	96	77.841	ENSPANG00000012488	LARP1B	98	77.841	Papio_anubis
ENSMICG00000037883	-	99	68.750	ENSPCIG00000026516	LARP1B	92	70.857	Phascolarctos_cinereus
ENSMICG00000037883	-	88	46.552	ENSPFOG00000022837	-	50	45.977	Poecilia_formosa
ENSMICG00000037883	-	77	51.373	ENSPREG00000005955	-	98	45.223	Poecilia_reticulata
ENSMICG00000037883	-	97	81.408	ENSPCOG00000021874	LARP1B	99	81.690	Propithecus_coquereli
ENSMICG00000037883	-	90	77.341	ENSRNOG00000038366	Larp1b	98	77.644	Rattus_norvegicus
ENSMICG00000037883	-	90	75.831	ENSRBIG00000039982	-	98	75.831	Rhinopithecus_bieti
ENSMICG00000037883	-	96	67.536	ENSRBIG00000038568	-	96	67.536	Rhinopithecus_bieti
ENSMICG00000037883	-	98	76.880	ENSRROG00000030771	LARP1B	99	77.159	Rhinopithecus_roxellana
ENSMICG00000037883	-	95	72.876	ENSRROG00000038525	-	94	77.003	Rhinopithecus_roxellana
ENSMICG00000037883	-	91	73.964	ENSSHAG00000014474	LARP1B	50	74.260	Sarcophilus_harrisii
ENSMICG00000037883	-	90	78.248	ENSSSCG00000034280	LARP1B	63	78.248	Sus_scrofa
ENSMICG00000037883	-	88	52.857	ENSSSCG00000040491	-	97	50.714	Sus_scrofa
ENSMICG00000037883	-	96	72.515	ENSUAMG00000016938	-	98	75.887	Ursus_americanus
ENSMICG00000037883	-	94	76.724	ENSVVUG00000011307	LARP1B	67	75.783	Vulpes_vulpes