EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000037935 (Gene tree)
Gene ID: 105885708
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 107499 bases
Position: chr2:88760282-88867780
Accession: 105885708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000019768	ResIII	PF04851.15	1.1e-11	1	1
ENSMICP00000019768	DEAD	PF00270.29	2.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000038658	HFM1-201	4317	XM_012790886	ENSMICP00000019768	1438 (aa)	XP_012646340	UPI00085B2DF5

Gene Model

Click here to download ENSMICG00000037935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000037935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000037935	HFM1	51	35.171	ENSMICG00000008861	ASCC3	62	35.171
ENSMICG00000037935	HFM1	58	31.196	ENSMICG00000004710	SNRNP200	74	31.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000037935	HFM1	100	88.673	ENSG00000162669	HFM1	100	88.673	Homo_sapiens
ENSMICG00000037935	HFM1	64	64.186	ENSAPOG00000005304	hfm1	100	64.186	Acanthochromis_polyacanthus
ENSMICG00000037935	HFM1	100	85.347	ENSAMEG00000000432	HFM1	100	85.347	Ailuropoda_melanoleuca
ENSMICG00000037935	HFM1	73	58.248	ENSACIG00000021553	hfm1	95	58.248	Amphilophus_citrinellus
ENSMICG00000037935	HFM1	64	64.685	ENSAOCG00000022839	hfm1	100	64.685	Amphiprion_ocellaris
ENSMICG00000037935	HFM1	64	64.452	ENSAPEG00000014316	hfm1	96	68.561	Amphiprion_percula
ENSMICG00000037935	HFM1	66	64.087	ENSATEG00000019181	hfm1	80	63.210	Anabas_testudineus
ENSMICG00000037935	HFM1	100	58.880	ENSAPLG00000013639	HFM1	100	58.880	Anas_platyrhynchos
ENSMICG00000037935	HFM1	100	85.000	ENSANAG00000029513	HFM1	100	85.000	Aotus_nancymaae
ENSMICG00000037935	HFM1	65	63.237	ENSACLG00000009033	hfm1	97	64.405	Astatotilapia_calliptera
ENSMICG00000037935	HFM1	73	60.428	ENSAMXG00000006108	hfm1	73	60.428	Astyanax_mexicanus
ENSMICG00000037935	HFM1	100	83.761	ENSBTAG00000020856	HFM1	100	83.761	Bos_taurus
ENSMICG00000037935	HFM1	100	86.379	ENSCJAG00000001843	HFM1	100	86.379	Callithrix_jacchus
ENSMICG00000037935	HFM1	100	84.594	ENSCAFG00000020187	HFM1	100	84.594	Canis_familiaris
ENSMICG00000037935	HFM1	100	86.389	ENSTSYG00000014250	HFM1	100	86.389	Carlito_syrichta
ENSMICG00000037935	HFM1	99	78.860	ENSCPOG00000007421	HFM1	99	78.860	Cavia_porcellus
ENSMICG00000037935	HFM1	100	86.449	ENSCCAG00000033206	HFM1	100	86.449	Cebus_capucinus
ENSMICG00000037935	HFM1	100	87.769	ENSCATG00000030987	HFM1	100	87.769	Cercocebus_atys
ENSMICG00000037935	HFM1	100	80.040	ENSCLAG00000005173	HFM1	99	80.040	Chinchilla_lanigera
ENSMICG00000037935	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSMICG00000037935	HFM1	100	72.859	ENSCGRG00001016995	Hfm1	100	72.859	Cricetulus_griseus_chok1gshd
ENSMICG00000037935	HFM1	100	77.153	ENSCGRG00000017181	Hfm1	100	77.153	Cricetulus_griseus_crigri
ENSMICG00000037935	HFM1	71	59.452	ENSCSEG00000017659	hfm1	94	59.546	Cynoglossus_semilaevis
ENSMICG00000037935	HFM1	50	68.811	ENSCVAG00000005075	hfm1	86	68.811	Cyprinodon_variegatus
ENSMICG00000037935	HFM1	76	54.809	ENSDARG00000104288	hfm1	96	54.809	Danio_rerio
ENSMICG00000037935	HFM1	100	80.673	ENSDNOG00000004776	HFM1	100	80.673	Dasypus_novemcinctus
ENSMICG00000037935	HFM1	100	77.557	ENSDORG00000014661	Hfm1	100	77.557	Dipodomys_ordii
ENSMICG00000037935	HFM1	70	85.419	ENSEASG00005015424	HFM1	97	85.419	Equus_asinus_asinus
ENSMICG00000037935	HFM1	100	83.849	ENSECAG00000024039	HFM1	100	83.849	Equus_caballus
ENSMICG00000037935	HFM1	63	66.886	ENSELUG00000018944	hfm1	97	66.886	Esox_lucius
ENSMICG00000037935	HFM1	100	84.941	ENSFCAG00000029116	HFM1	100	84.941	Felis_catus
ENSMICG00000037935	HFM1	100	58.707	ENSFALG00000001781	HFM1	100	59.247	Ficedula_albicollis
ENSMICG00000037935	HFM1	100	79.195	ENSFDAG00000020816	HFM1	100	79.195	Fukomys_damarensis
ENSMICG00000037935	HFM1	66	60.291	ENSGMOG00000017436	hfm1	100	60.291	Gadus_morhua
ENSMICG00000037935	HFM1	71	60.752	ENSGAFG00000018093	hfm1	94	66.031	Gambusia_affinis
ENSMICG00000037935	HFM1	66	61.762	ENSGACG00000015686	hfm1	100	61.762	Gasterosteus_aculeatus
ENSMICG00000037935	HFM1	100	88.464	ENSGGOG00000038524	HFM1	100	88.464	Gorilla_gorilla
ENSMICG00000037935	HFM1	65	64.309	ENSHBUG00000007309	hfm1	97	59.357	Haplochromis_burtoni
ENSMICG00000037935	HFM1	57	63.892	ENSHCOG00000019632	hfm1	97	63.892	Hippocampus_comes
ENSMICG00000037935	HFM1	70	61.994	ENSIPUG00000017020	hfm1	92	65.636	Ictalurus_punctatus
ENSMICG00000037935	HFM1	100	77.554	ENSJJAG00000017198	Hfm1	100	77.554	Jaculus_jaculus
ENSMICG00000037935	HFM1	62	63.274	ENSKMAG00000002282	hfm1	90	63.274	Kryptolebias_marmoratus
ENSMICG00000037935	HFM1	73	57.934	ENSLBEG00000006759	hfm1	96	65.000	Labrus_bergylta
ENSMICG00000037935	HFM1	66	69.969	ENSLACG00000010698	HFM1	100	65.915	Latimeria_chalumnae
ENSMICG00000037935	HFM1	72	63.844	ENSLOCG00000004931	hfm1	96	64.068	Lepisosteus_oculatus
ENSMICG00000037935	HFM1	52	89.771	ENSLAFG00000015903	-	99	89.771	Loxodonta_africana
ENSMICG00000037935	HFM1	100	84.775	ENSMFAG00000003649	HFM1	100	84.775	Macaca_fascicularis
ENSMICG00000037935	HFM1	100	87.422	ENSMMUG00000006819	HFM1	100	87.422	Macaca_mulatta
ENSMICG00000037935	HFM1	54	70.142	ENSMAMG00000004623	hfm1	97	66.224	Mastacembelus_armatus
ENSMICG00000037935	HFM1	65	63.237	ENSMZEG00005004679	hfm1	97	64.405	Maylandia_zebra
ENSMICG00000037935	HFM1	54	76.943	ENSMGAG00000008437	HFM1	98	76.943	Meleagris_gallopavo
ENSMICG00000037935	HFM1	100	76.891	ENSMAUG00000018858	Hfm1	100	76.891	Mesocricetus_auratus
ENSMICG00000037935	HFM1	100	75.678	ENSMOCG00000014812	Hfm1	100	75.678	Microtus_ochrogaster
ENSMICG00000037935	HFM1	62	64.013	ENSMMOG00000006148	hfm1	96	64.079	Mola_mola
ENSMICG00000037935	HFM1	67	62.733	ENSMALG00000002401	hfm1	96	65.192	Monopterus_albus
ENSMICG00000037935	HFM1	95	72.189	MGP_CAROLIEiJ_G0027496	Hfm1	100	72.189	Mus_caroli
ENSMICG00000037935	HFM1	100	76.720	ENSMUSG00000043410	Hfm1	100	76.720	Mus_musculus
ENSMICG00000037935	HFM1	100	76.095	MGP_PahariEiJ_G0017268	Hfm1	100	76.095	Mus_pahari
ENSMICG00000037935	HFM1	100	76.650	MGP_SPRETEiJ_G0028495	Hfm1	100	76.650	Mus_spretus
ENSMICG00000037935	HFM1	100	81.696	ENSMPUG00000004594	HFM1	100	81.696	Mustela_putorius_furo
ENSMICG00000037935	HFM1	100	83.576	ENSMLUG00000010200	HFM1	100	83.576	Myotis_lucifugus
ENSMICG00000037935	HFM1	65	60.236	ENSNBRG00000002910	hfm1	97	64.649	Neolamprologus_brichardi
ENSMICG00000037935	HFM1	100	84.525	ENSNLEG00000010285	HFM1	100	84.525	Nomascus_leucogenys
ENSMICG00000037935	HFM1	84	65.903	ENSMEUG00000015788	HFM1	84	65.903	Notamacropus_eugenii
ENSMICG00000037935	HFM1	84	77.663	ENSOPRG00000013916	HFM1	84	77.663	Ochotona_princeps
ENSMICG00000037935	HFM1	71	61.353	ENSONIG00000010590	hfm1	99	61.223	Oreochromis_niloticus
ENSMICG00000037935	HFM1	57	65.111	ENSORLG00000026844	hfm1	99	65.111	Oryzias_latipes
ENSMICG00000037935	HFM1	67	56.429	ENSORLG00020002951	hfm1	77	56.244	Oryzias_latipes_hni
ENSMICG00000037935	HFM1	84	53.953	ENSOMEG00000016474	hfm1	83	53.953	Oryzias_melastigma
ENSMICG00000037935	HFM1	85	89.585	ENSOGAG00000032369	HFM1	100	89.585	Otolemur_garnettii
ENSMICG00000037935	HFM1	100	84.327	ENSOARG00000015812	HFM1	100	84.327	Ovis_aries
ENSMICG00000037935	HFM1	92	89.977	ENSPPAG00000024582	HFM1	99	89.977	Pan_paniscus
ENSMICG00000037935	HFM1	100	85.149	ENSPPRG00000003270	HFM1	100	85.149	Panthera_pardus
ENSMICG00000037935	HFM1	100	84.941	ENSPTIG00000018881	HFM1	100	84.941	Panthera_tigris_altaica
ENSMICG00000037935	HFM1	100	88.742	ENSPTRG00000000948	HFM1	100	88.742	Pan_troglodytes
ENSMICG00000037935	HFM1	100	87.700	ENSPANG00000009838	HFM1	100	87.700	Papio_anubis
ENSMICG00000037935	HFM1	62	67.303	ENSPKIG00000003810	hfm1	95	67.310	Paramormyrops_kingsleyae
ENSMICG00000037935	HFM1	58	65.217	ENSPMGG00000011059	hfm1	100	65.217	Periophthalmus_magnuspinnatus
ENSMICG00000037935	HFM1	100	79.291	ENSPEMG00000022852	Hfm1	100	79.291	Peromyscus_maniculatus_bairdii
ENSMICG00000037935	HFM1	100	65.863	ENSPCIG00000014233	HFM1	100	65.863	Phascolarctos_cinereus
ENSMICG00000037935	HFM1	71	61.017	ENSPFOG00000017194	hfm1	100	61.205	Poecilia_formosa
ENSMICG00000037935	HFM1	71	62.959	ENSPLAG00000000571	hfm1	92	62.959	Poecilia_latipinna
ENSMICG00000037935	HFM1	71	62.959	ENSPMEG00000019475	hfm1	93	62.959	Poecilia_mexicana
ENSMICG00000037935	HFM1	71	62.062	ENSPREG00000007803	hfm1	94	65.394	Poecilia_reticulata
ENSMICG00000037935	HFM1	100	88.117	ENSPPYG00000001163	HFM1	100	88.117	Pongo_abelii
ENSMICG00000037935	HFM1	70	80.269	ENSPCAG00000004289	-	70	80.269	Procavia_capensis
ENSMICG00000037935	HFM1	100	76.475	ENSPVAG00000009713	HFM1	100	76.475	Pteropus_vampyrus
ENSMICG00000037935	HFM1	65	63.023	ENSPNYG00000001795	hfm1	97	64.286	Pundamilia_nyererei
ENSMICG00000037935	HFM1	59	67.532	ENSPNAG00000010865	hfm1	84	67.532	Pygocentrus_nattereri
ENSMICG00000037935	HFM1	100	75.330	ENSRNOG00000023299	Hfm1	100	75.330	Rattus_norvegicus
ENSMICG00000037935	HFM1	100	87.491	ENSRROG00000045569	HFM1	100	87.491	Rhinopithecus_roxellana
ENSMICG00000037935	HFM1	100	83.878	ENSSBOG00000027456	HFM1	100	83.878	Saimiri_boliviensis_boliviensis
ENSMICG00000037935	HFM1	60	70.323	ENSSHAG00000014616	-	98	70.323	Sarcophilus_harrisii
ENSMICG00000037935	HFM1	85	56.165	ENSSFOG00015020129	hfm1	82	56.165	Scleropages_formosus
ENSMICG00000037935	HFM1	62	65.179	ENSSMAG00000006907	hfm1	87	65.179	Scophthalmus_maximus
ENSMICG00000037935	HFM1	60	63.986	ENSSDUG00000011424	hfm1	96	63.986	Seriola_dumerili
ENSMICG00000037935	HFM1	60	64.269	ENSSLDG00000016386	hfm1	96	64.269	Seriola_lalandi_dorsalis
ENSMICG00000037935	HFM1	68	58.603	ENSSPAG00000001023	hfm1	95	65.603	Stegastes_partitus
ENSMICG00000037935	HFM1	100	81.023	ENSSSCG00000006912	HFM1	100	81.023	Sus_scrofa
ENSMICG00000037935	HFM1	66	74.322	ENSTGUG00000006172	HFM1	100	74.322	Taeniopygia_guttata
ENSMICG00000037935	HFM1	100	81.111	ENSTTRG00000013933	HFM1	100	81.111	Tursiops_truncatus
ENSMICG00000037935	HFM1	93	83.634	ENSVPAG00000011331	HFM1	93	83.634	Vicugna_pacos
ENSMICG00000037935	HFM1	70	82.852	ENSVVUG00000020760	HFM1	99	82.852	Vulpes_vulpes
ENSMICG00000037935	HFM1	58	66.787	ENSXMAG00000004178	hfm1	92	66.787	Xiphophorus_maculatus