EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000038002 (Gene tree)
Gene ID: 105858376
Gene Symbol: -
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 23006 bases
Position: chr7:100021777-100044782
Accession: 105858376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000030888	CSD	PF00313.22	3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000028175	-	2043	XM_012741474	ENSMICP00000030888	370 (aa)	XP_012596928	UPI000642D140

Gene Model

Click here to download ENSMICG00000038002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000038002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000038002	-	81	52.866	ENSMICG00000014984	-	85	55.631
ENSMICG00000038002	-	86	84.270	ENSMICG00000031459	-	100	84.286
ENSMICG00000038002	-	84	50.760	ENSMICG00000046432	-	83	52.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000038002	-	100	92.204	ENSG00000060138	YBX3	100	90.591	Homo_sapiens
ENSMICG00000038002	-	96	90.169	ENSAMEG00000009393	YBX3	83	97.241	Ailuropoda_melanoleuca
ENSMICG00000038002	-	77	69.825	ENSAPLG00000003147	YBX3	100	69.825	Anas_platyrhynchos
ENSMICG00000038002	-	86	92.790	ENSANAG00000024492	-	100	90.054	Aotus_nancymaae
ENSMICG00000038002	-	98	83.077	ENSANAG00000033366	-	93	81.538	Aotus_nancymaae
ENSMICG00000038002	-	100	84.935	ENSBTAG00000009663	YBX3	77	90.411	Bos_taurus
ENSMICG00000038002	-	75	89.873	ENSCJAG00000033824	-	97	89.041	Callithrix_jacchus
ENSMICG00000038002	-	100	91.129	ENSCJAG00000021660	-	100	89.785	Callithrix_jacchus
ENSMICG00000038002	-	78	95.470	ENSCAFG00000013401	YBX3	84	96.617	Canis_familiaris
ENSMICG00000038002	-	100	90.617	ENSCAFG00020006412	YBX3	100	90.080	Canis_lupus_dingo
ENSMICG00000038002	-	100	84.935	ENSCHIG00000010863	YBX3	82	93.493	Capra_hircus
ENSMICG00000038002	-	100	55.135	ENSTSYG00000035821	-	97	75.000	Carlito_syrichta
ENSMICG00000038002	-	77	94.774	ENSTSYG00000004204	-	88	95.819	Carlito_syrichta
ENSMICG00000038002	-	77	90.909	ENSCAPG00000015039	YBX3	93	90.909	Cavia_aperea
ENSMICG00000038002	-	79	91.781	ENSCPOG00000011329	YBX3	86	91.781	Cavia_porcellus
ENSMICG00000038002	-	100	91.667	ENSCCAG00000016469	YBX3	100	90.054	Cebus_capucinus
ENSMICG00000038002	-	100	91.153	ENSCATG00000034411	YBX3	100	89.812	Cercocebus_atys
ENSMICG00000038002	-	77	91.259	ENSCLAG00000016030	YBX3	94	91.259	Chinchilla_lanigera
ENSMICG00000038002	-	100	91.689	ENSCSAG00000008744	YBX3	100	90.080	Chlorocebus_sabaeus
ENSMICG00000038002	-	76	80.814	ENSCHOG00000011988	YBX3	53	100.000	Choloepus_hoffmanni
ENSMICG00000038002	-	78	81.724	ENSCPBG00000014147	YBX3	81	81.507	Chrysemys_picta_bellii
ENSMICG00000038002	-	79	94.576	ENSCANG00000036801	YBX3	93	94.881	Colobus_angolensis_palliatus
ENSMICG00000038002	-	85	92.722	ENSCGRG00001016148	Ybx3	100	85.946	Cricetulus_griseus_chok1gshd
ENSMICG00000038002	-	77	93.127	ENSCGRG00000004563	Ybx3	98	93.127	Cricetulus_griseus_crigri
ENSMICG00000038002	-	90	84.911	ENSDORG00000009103	Ybx3	81	94.056	Dipodomys_ordii
ENSMICG00000038002	-	76	85.315	ENSETEG00000002557	YBX3	99	83.451	Echinops_telfairi
ENSMICG00000038002	-	100	90.000	ENSEASG00005014726	YBX3	100	89.730	Equus_asinus_asinus
ENSMICG00000038002	-	100	92.973	ENSECAG00000013777	YBX3	100	92.703	Equus_caballus
ENSMICG00000038002	-	76	90.845	ENSEEUG00000010415	YBX3	100	91.197	Erinaceus_europaeus
ENSMICG00000038002	-	100	92.493	ENSFCAG00000027748	YBX3	100	92.761	Felis_catus
ENSMICG00000038002	-	77	65.854	ENSFALG00000003661	YBX3	100	63.066	Ficedula_albicollis
ENSMICG00000038002	-	77	87.413	ENSFDAG00000021192	YBX3	92	87.413	Fukomys_damarensis
ENSMICG00000038002	-	100	54.933	ENSGALG00000031890	YBX3	70	97.849	Gallus_gallus
ENSMICG00000038002	-	78	80.690	ENSGAGG00000017780	YBX3	81	80.479	Gopherus_agassizii
ENSMICG00000038002	-	100	91.957	ENSGGOG00000001352	YBX3	100	90.349	Gorilla_gorilla
ENSMICG00000038002	-	82	78.431	ENSHGLG00000014798	-	86	79.054	Heterocephalus_glaber_female
ENSMICG00000038002	-	74	81.387	ENSHGLG00000015495	-	87	78.498	Heterocephalus_glaber_female
ENSMICG00000038002	-	54	97.727	ENSHGLG00100003589	YBX3	87	64.111	Heterocephalus_glaber_male
ENSMICG00000038002	-	93	87.209	ENSSTOG00000032577	-	83	89.726	Ictidomys_tridecemlineatus
ENSMICG00000038002	-	77	88.462	ENSSTOG00000002108	-	88	88.462	Ictidomys_tridecemlineatus
ENSMICG00000038002	-	79	68.919	ENSJJAG00000014239	Ybx3	95	86.047	Jaculus_jaculus
ENSMICG00000038002	-	100	93.784	ENSLAFG00000017247	YBX3	100	93.784	Loxodonta_africana
ENSMICG00000038002	-	100	91.667	ENSMFAG00000039369	YBX3	100	90.323	Macaca_fascicularis
ENSMICG00000038002	-	87	92.000	ENSMMUG00000022469	YBX3	90	94.198	Macaca_mulatta
ENSMICG00000038002	-	100	91.398	ENSMNEG00000045109	YBX3	100	90.054	Macaca_nemestrina
ENSMICG00000038002	-	94	83.429	ENSMLEG00000033618	YBX3	81	95.105	Mandrillus_leucophaeus
ENSMICG00000038002	-	77	67.832	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSMICG00000038002	-	88	92.000	ENSMAUG00000012185	Ybx3	91	94.178	Mesocricetus_auratus
ENSMICG00000038002	-	82	94.702	ENSMOCG00000016291	Ybx3	95	94.863	Microtus_ochrogaster
ENSMICG00000038002	-	77	86.063	ENSMODG00000018248	YBX3	91	86.063	Monodelphis_domestica
ENSMICG00000038002	-	85	91.772	MGP_CAROLIEiJ_G0028947	Ybx3	100	85.135	Mus_caroli
ENSMICG00000038002	-	85	91.772	ENSMUSG00000030189	Ybx3	100	85.135	Mus_musculus
ENSMICG00000038002	-	85	92.405	MGP_PahariEiJ_G0022709	Ybx3	100	85.676	Mus_pahari
ENSMICG00000038002	-	85	92.089	MGP_SPRETEiJ_G0029994	Ybx3	100	85.405	Mus_spretus
ENSMICG00000038002	-	100	79.474	ENSMPUG00000011810	YBX3	100	78.947	Mustela_putorius_furo
ENSMICG00000038002	-	71	94.796	ENSMLUG00000007476	YBX3	100	94.796	Myotis_lucifugus
ENSMICG00000038002	-	85	86.751	ENSNGAG00000000710	Ybx3	68	86.709	Nannospalax_galili
ENSMICG00000038002	-	89	90.361	ENSNLEG00000034844	YBX3	83	90.444	Nomascus_leucogenys
ENSMICG00000038002	-	55	67.619	ENSMEUG00000002507	-	81	77.457	Notamacropus_eugenii
ENSMICG00000038002	-	86	85.266	ENSODEG00000017957	YBX3	93	85.669	Octodon_degus
ENSMICG00000038002	-	79	91.156	ENSOCUG00000001889	YBX3	85	91.438	Oryctolagus_cuniculus
ENSMICG00000038002	-	100	94.695	ENSOGAG00000013245	YBX3	100	94.695	Otolemur_garnettii
ENSMICG00000038002	-	80	84.848	ENSOARG00000020919	YBX3	99	85.034	Ovis_aries
ENSMICG00000038002	-	100	84.906	ENSPPAG00000039068	YBX3	100	84.906	Pan_paniscus
ENSMICG00000038002	-	100	92.761	ENSPPRG00000005859	YBX3	100	93.029	Panthera_pardus
ENSMICG00000038002	-	77	96.127	ENSPTIG00000005322	YBX3	81	95.804	Panthera_tigris_altaica
ENSMICG00000038002	-	100	91.711	ENSPTRG00000004681	YBX3	100	90.107	Pan_troglodytes
ENSMICG00000038002	-	100	91.398	ENSPANG00000010280	YBX3	100	90.054	Papio_anubis
ENSMICG00000038002	-	57	99.038	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSMICG00000038002	-	87	92.857	ENSPEMG00000012132	-	92	95.205	Peromyscus_maniculatus_bairdii
ENSMICG00000038002	-	62	94.017	ENSPEMG00000010391	-	73	92.000	Peromyscus_maniculatus_bairdii
ENSMICG00000038002	-	70	83.398	ENSPCIG00000029949	YBX3	100	83.398	Phascolarctos_cinereus
ENSMICG00000038002	-	100	91.667	ENSPPYG00000004279	YBX3	100	90.054	Pongo_abelii
ENSMICG00000038002	-	79	90.378	ENSPCAG00000001397	YBX3	98	88.772	Procavia_capensis
ENSMICG00000038002	-	70	91.892	ENSPCOG00000011663	YBX3	100	91.892	Propithecus_coquereli
ENSMICG00000038002	-	100	80.214	ENSPVAG00000006740	YBX3	77	93.403	Pteropus_vampyrus
ENSMICG00000038002	-	85	93.038	ENSRNOG00000005480	Ybx3	100	85.676	Rattus_norvegicus
ENSMICG00000038002	-	100	90.591	ENSRBIG00000039208	YBX3	100	90.054	Rhinopithecus_bieti
ENSMICG00000038002	-	100	91.398	ENSRROG00000029638	YBX3	100	89.785	Rhinopithecus_roxellana
ENSMICG00000038002	-	88	87.156	ENSSBOG00000030573	YBX3	83	95.455	Saimiri_boliviensis_boliviensis
ENSMICG00000038002	-	77	81.443	ENSSHAG00000003262	YBX3	98	82.474	Sarcophilus_harrisii
ENSMICG00000038002	-	95	87.535	ENSSSCG00000000633	YBX3	100	90.026	Sus_scrofa
ENSMICG00000038002	-	100	84.097	ENSTBEG00000012570	YBX3	81	93.515	Tupaia_belangeri
ENSMICG00000038002	-	71	84.586	ENSTTRG00000008045	YBX3	100	84.962	Tursiops_truncatus
ENSMICG00000038002	-	75	93.502	ENSUAMG00000016662	YBX3	100	93.502	Ursus_americanus
ENSMICG00000038002	-	77	96.503	ENSUMAG00000016118	YBX3	94	96.503	Ursus_maritimus
ENSMICG00000038002	-	76	68.858	ENSVPAG00000000876	YBX3	100	72.535	Vicugna_pacos
ENSMICG00000038002	-	75	91.697	ENSVVUG00000004956	YBX3	100	92.058	Vulpes_vulpes
ENSMICG00000038002	-	71	71.795	ENSXETG00000016239	ybx3	92	56.376	Xenopus_tropicalis