EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000038011 (Gene tree)
Gene ID: 105874538
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 12602 bases
Position: chr18:51150507-51163108
Accession: 105874538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000031197	RRM_1	PF00076.22	3.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000051932	RBM38-201	2108	XM_012770481	ENSMICP00000031197	216 (aa)	XP_012625935	UPI00085B08BB

Gene Model

Click here to download ENSMICG00000038011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000038011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000038011	RBM38	100	64.629	ENSMICG00000032332	RBM24	93	70.996
ENSMICG00000038011	RBM38	85	36.842	ENSMICG00000033181	MSI1	80	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000038011	RBM38	100	97.685	ENSG00000132819	RBM38	100	96.835	Homo_sapiens
ENSMICG00000038011	RBM38	100	58.723	ENSAPOG00000003301	rbm38	93	58.723	Acanthochromis_polyacanthus
ENSMICG00000038011	RBM38	100	68.778	ENSAPOG00000009939	-	94	69.369	Acanthochromis_polyacanthus
ENSMICG00000038011	RBM38	98	70.776	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSMICG00000038011	RBM38	100	56.723	ENSACIG00000000010	rbm38	93	56.723	Amphilophus_citrinellus
ENSMICG00000038011	RBM38	99	68.182	ENSAOCG00000012559	RBM38	90	69.231	Amphiprion_ocellaris
ENSMICG00000038011	RBM38	100	58.723	ENSAOCG00000013497	-	93	58.723	Amphiprion_ocellaris
ENSMICG00000038011	RBM38	98	63.256	ENSAPEG00000013137	rbm38	93	58.723	Amphiprion_percula
ENSMICG00000038011	RBM38	100	64.706	ENSAPEG00000023581	-	95	65.690	Amphiprion_percula
ENSMICG00000038011	RBM38	98	65.368	ENSATEG00000016710	-	92	66.524	Anabas_testudineus
ENSMICG00000038011	RBM38	100	60.714	ENSATEG00000016366	rbm38	94	60.714	Anabas_testudineus
ENSMICG00000038011	RBM38	100	78.539	ENSACAG00000016238	RBM38	90	78.539	Anolis_carolinensis
ENSMICG00000038011	RBM38	100	97.222	ENSANAG00000031959	RBM38	100	97.222	Aotus_nancymaae
ENSMICG00000038011	RBM38	98	67.241	ENSACLG00000019514	-	92	67.811	Astatotilapia_calliptera
ENSMICG00000038011	RBM38	100	67.391	ENSAMXG00000015601	-	94	68.122	Astyanax_mexicanus
ENSMICG00000038011	RBM38	86	65.405	ENSAMXG00000038120	rbm38	76	65.946	Astyanax_mexicanus
ENSMICG00000038011	RBM38	100	95.370	ENSBTAG00000008105	RBM38	90	95.370	Bos_taurus
ENSMICG00000038011	RBM38	64	61.594	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSMICG00000038011	RBM38	100	97.222	ENSCJAG00000019139	RBM38	90	97.222	Callithrix_jacchus
ENSMICG00000038011	RBM38	100	96.759	ENSCAFG00020021943	RBM38	90	96.759	Canis_lupus_dingo
ENSMICG00000038011	RBM38	100	94.907	ENSCHIG00000002609	RBM38	90	94.907	Capra_hircus
ENSMICG00000038011	RBM38	100	96.296	ENSCPOG00000012781	RBM38	90	96.296	Cavia_porcellus
ENSMICG00000038011	RBM38	100	97.222	ENSCCAG00000036872	RBM38	90	97.222	Cebus_capucinus
ENSMICG00000038011	RBM38	100	96.759	ENSCATG00000032133	RBM38	90	96.759	Cercocebus_atys
ENSMICG00000038011	RBM38	100	96.296	ENSCLAG00000005906	RBM38	94	96.296	Chinchilla_lanigera
ENSMICG00000038011	RBM38	100	96.759	ENSCSAG00000015503	RBM38	90	96.759	Chlorocebus_sabaeus
ENSMICG00000038011	RBM38	100	82.569	ENSCPBG00000024059	RBM38	100	82.569	Chrysemys_picta_bellii
ENSMICG00000038011	RBM38	76	59.756	ENSCSAVG00000001132	-	76	56.098	Ciona_savignyi
ENSMICG00000038011	RBM38	100	72.685	ENSCANG00000030105	-	79	72.685	Colobus_angolensis_palliatus
ENSMICG00000038011	RBM38	100	94.444	ENSCGRG00001012928	Rbm38	91	94.444	Cricetulus_griseus_chok1gshd
ENSMICG00000038011	RBM38	69	68.000	ENSCSEG00000020943	rbm38	60	60.870	Cynoglossus_semilaevis
ENSMICG00000038011	RBM38	98	70.320	ENSCSEG00000004701	-	93	71.364	Cynoglossus_semilaevis
ENSMICG00000038011	RBM38	98	66.810	ENSCVAG00000005472	-	92	67.234	Cyprinodon_variegatus
ENSMICG00000038011	RBM38	98	57.759	ENSCVAG00000015952	rbm38	91	59.052	Cyprinodon_variegatus
ENSMICG00000038011	RBM38	98	65.022	ENSDARG00000058818	rbm38	92	65.022	Danio_rerio
ENSMICG00000038011	RBM38	100	89.352	ENSDNOG00000032004	RBM38	100	89.352	Dasypus_novemcinctus
ENSMICG00000038011	RBM38	63	68.613	ENSEBUG00000015164	rbm38	83	68.613	Eptatretus_burgeri
ENSMICG00000038011	RBM38	100	95.370	ENSECAG00000007700	RBM38	90	95.370	Equus_caballus
ENSMICG00000038011	RBM38	100	94.009	ENSEEUG00000013489	RBM38	91	95.392	Erinaceus_europaeus
ENSMICG00000038011	RBM38	93	65.174	ENSELUG00000000585	-	87	65.174	Esox_lucius
ENSMICG00000038011	RBM38	100	66.667	ENSELUG00000005849	-	95	66.667	Esox_lucius
ENSMICG00000038011	RBM38	100	96.759	ENSFCAG00000042916	RBM38	90	96.759	Felis_catus
ENSMICG00000038011	RBM38	80	84.971	ENSFALG00000010805	RBM38	90	84.971	Ficedula_albicollis
ENSMICG00000038011	RBM38	98	73.148	ENSFHEG00000006160	-	92	73.148	Fundulus_heteroclitus
ENSMICG00000038011	RBM38	98	57.082	ENSFHEG00000017748	rbm38	91	57.082	Fundulus_heteroclitus
ENSMICG00000038011	RBM38	83	71.823	ENSGMOG00000016655	-	96	75.824	Gadus_morhua
ENSMICG00000038011	RBM38	100	80.734	ENSGALG00000026081	RBM38	100	80.734	Gallus_gallus
ENSMICG00000038011	RBM38	98	63.208	ENSGACG00000015224	rbm38	98	63.208	Gasterosteus_aculeatus
ENSMICG00000038011	RBM38	99	68.304	ENSGACG00000009873	-	100	68.444	Gasterosteus_aculeatus
ENSMICG00000038011	RBM38	100	83.028	ENSGAGG00000001187	RBM38	100	83.028	Gopherus_agassizii
ENSMICG00000038011	RBM38	100	59.565	ENSHBUG00000012058	rbm38	92	59.565	Haplochromis_burtoni
ENSMICG00000038011	RBM38	98	70.776	ENSHBUG00000011778	-	92	71.364	Haplochromis_burtoni
ENSMICG00000038011	RBM38	100	93.519	ENSHGLG00000015077	RBM38	90	93.519	Heterocephalus_glaber_female
ENSMICG00000038011	RBM38	89	57.653	ENSHCOG00000019040	rbm38	82	57.653	Hippocampus_comes
ENSMICG00000038011	RBM38	83	74.176	ENSHCOG00000005622	-	51	75.275	Hippocampus_comes
ENSMICG00000038011	RBM38	100	66.234	ENSIPUG00000019349	-	94	66.234	Ictalurus_punctatus
ENSMICG00000038011	RBM38	98	53.814	ENSKMAG00000012402	rbm38	98	54.237	Kryptolebias_marmoratus
ENSMICG00000038011	RBM38	98	68.807	ENSLBEG00000016163	RBM38	92	69.863	Labrus_bergylta
ENSMICG00000038011	RBM38	98	57.940	ENSLBEG00000018878	rbm38	91	57.940	Labrus_bergylta
ENSMICG00000038011	RBM38	100	71.429	ENSLOCG00000003456	rbm38	94	71.429	Lepisosteus_oculatus
ENSMICG00000038011	RBM38	100	96.759	ENSMFAG00000043808	RBM38	90	96.759	Macaca_fascicularis
ENSMICG00000038011	RBM38	100	96.759	ENSMMUG00000031391	RBM38	90	96.759	Macaca_mulatta
ENSMICG00000038011	RBM38	100	96.759	ENSMNEG00000034683	RBM38	90	96.759	Macaca_nemestrina
ENSMICG00000038011	RBM38	50	84.404	ENSMLEG00000043261	-	88	84.404	Mandrillus_leucophaeus
ENSMICG00000038011	RBM38	100	57.563	ENSMAMG00000024135	rbm38	93	57.563	Mastacembelus_armatus
ENSMICG00000038011	RBM38	100	64.831	ENSMAMG00000020499	RBM38	95	65.401	Mastacembelus_armatus
ENSMICG00000038011	RBM38	98	70.776	ENSMZEG00005000849	-	92	71.364	Maylandia_zebra
ENSMICG00000038011	RBM38	100	57.143	ENSMZEG00005026036	rbm38	93	57.143	Maylandia_zebra
ENSMICG00000038011	RBM38	100	94.907	ENSMAUG00000021211	Rbm38	91	94.907	Mesocricetus_auratus
ENSMICG00000038011	RBM38	100	95.370	ENSMOCG00000008715	Rbm38	91	95.370	Microtus_ochrogaster
ENSMICG00000038011	RBM38	98	70.233	ENSMMOG00000020051	-	90	70.833	Mola_mola
ENSMICG00000038011	RBM38	100	82.569	ENSMODG00000016458	RBM38	92	82.569	Monodelphis_domestica
ENSMICG00000038011	RBM38	83	75.824	ENSMALG00000004680	RBM38	67	75.824	Monopterus_albus
ENSMICG00000038011	RBM38	100	56.818	ENSMALG00000022327	rbm38	93	57.399	Monopterus_albus
ENSMICG00000038011	RBM38	100	94.907	MGP_CAROLIEiJ_G0024745	Rbm38	91	94.907	Mus_caroli
ENSMICG00000038011	RBM38	100	95.370	ENSMUSG00000027510	Rbm38	91	95.370	Mus_musculus
ENSMICG00000038011	RBM38	100	94.907	MGP_PahariEiJ_G0026186	Rbm38	91	94.907	Mus_pahari
ENSMICG00000038011	RBM38	100	94.907	MGP_SPRETEiJ_G0025665	Rbm38	91	94.907	Mus_spretus
ENSMICG00000038011	RBM38	86	98.378	ENSMPUG00000006518	RBM38	93	97.861	Mustela_putorius_furo
ENSMICG00000038011	RBM38	100	90.741	ENSMLUG00000011140	RBM38	100	90.741	Myotis_lucifugus
ENSMICG00000038011	RBM38	98	67.241	ENSNBRG00000022545	-	92	67.811	Neolamprologus_brichardi
ENSMICG00000038011	RBM38	100	61.161	ENSNBRG00000022685	rbm38	91	61.161	Neolamprologus_brichardi
ENSMICG00000038011	RBM38	53	85.217	ENSMEUG00000005475	-	86	85.217	Notamacropus_eugenii
ENSMICG00000038011	RBM38	100	96.296	ENSODEG00000007980	RBM38	90	96.296	Octodon_degus
ENSMICG00000038011	RBM38	99	57.384	ENSONIG00000017073	rbm38	95	57.384	Oreochromis_niloticus
ENSMICG00000038011	RBM38	98	67.100	ENSONIG00000020324	-	92	67.672	Oreochromis_niloticus
ENSMICG00000038011	RBM38	100	80.556	ENSOANG00000009259	RBM38	83	81.481	Ornithorhynchus_anatinus
ENSMICG00000038011	RBM38	98	55.556	ENSORLG00000012154	rbm38	93	54.812	Oryzias_latipes
ENSMICG00000038011	RBM38	98	63.519	ENSORLG00000027180	-	92	66.094	Oryzias_latipes
ENSMICG00000038011	RBM38	98	63.519	ENSORLG00020020751	-	92	66.094	Oryzias_latipes_hni
ENSMICG00000038011	RBM38	100	55.649	ENSORLG00020017871	rbm38	93	55.649	Oryzias_latipes_hni
ENSMICG00000038011	RBM38	98	63.793	ENSORLG00015017040	-	92	66.524	Oryzias_latipes_hsok
ENSMICG00000038011	RBM38	99	58.986	ENSORLG00015012606	rbm38	90	58.986	Oryzias_latipes_hsok
ENSMICG00000038011	RBM38	100	55.230	ENSOMEG00000006805	rbm38	93	55.230	Oryzias_melastigma
ENSMICG00000038011	RBM38	98	63.636	ENSOMEG00000023912	-	92	65.086	Oryzias_melastigma
ENSMICG00000038011	RBM38	100	97.222	ENSOGAG00000029136	RBM38	90	97.222	Otolemur_garnettii
ENSMICG00000038011	RBM38	100	96.759	ENSPPRG00000009507	RBM38	90	96.759	Panthera_pardus
ENSMICG00000038011	RBM38	94	94.118	ENSPTRG00000013661	RBM38	98	94.118	Pan_troglodytes
ENSMICG00000038011	RBM38	57	100.000	ENSPTRG00000045845	-	68	100.000	Pan_troglodytes
ENSMICG00000038011	RBM38	100	96.759	ENSPANG00000020919	-	90	96.759	Papio_anubis
ENSMICG00000038011	RBM38	98	78.302	ENSPANG00000033127	-	92	77.103	Papio_anubis
ENSMICG00000038011	RBM38	98	68.636	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSMICG00000038011	RBM38	98	66.079	ENSPKIG00000025417	rbm38	92	66.520	Paramormyrops_kingsleyae
ENSMICG00000038011	RBM38	100	82.110	ENSPSIG00000011649	RBM38	92	82.110	Pelodiscus_sinensis
ENSMICG00000038011	RBM38	98	62.232	ENSPMGG00000017094	-	92	63.248	Periophthalmus_magnuspinnatus
ENSMICG00000038011	RBM38	100	57.143	ENSPMGG00000011343	rbm38	94	58.403	Periophthalmus_magnuspinnatus
ENSMICG00000038011	RBM38	100	82.569	ENSPCIG00000013648	RBM38	92	82.569	Phascolarctos_cinereus
ENSMICG00000038011	RBM38	98	56.540	ENSPFOG00000011658	rbm38	91	57.265	Poecilia_formosa
ENSMICG00000038011	RBM38	98	67.373	ENSPLAG00000002500	-	92	69.068	Poecilia_latipinna
ENSMICG00000038011	RBM38	98	55.983	ENSPLAG00000005218	rbm38	91	57.265	Poecilia_latipinna
ENSMICG00000038011	RBM38	98	56.410	ENSPMEG00000015770	rbm38	91	57.265	Poecilia_mexicana
ENSMICG00000038011	RBM38	98	56.962	ENSPREG00000007398	rbm38	91	57.692	Poecilia_reticulata
ENSMICG00000038011	RBM38	100	98.148	ENSPCOG00000026201	RBM38	90	98.148	Propithecus_coquereli
ENSMICG00000038011	RBM38	100	64.815	ENSPVAG00000006457	RBM38	91	64.815	Pteropus_vampyrus
ENSMICG00000038011	RBM38	98	70.776	ENSPNYG00000019727	-	100	89.744	Pundamilia_nyererei
ENSMICG00000038011	RBM38	98	61.111	ENSPNYG00000021373	rbm38	92	60.268	Pundamilia_nyererei
ENSMICG00000038011	RBM38	94	65.728	ENSPNAG00000010596	rbm38	88	65.728	Pygocentrus_nattereri
ENSMICG00000038011	RBM38	100	67.249	ENSPNAG00000015123	-	96	78.030	Pygocentrus_nattereri
ENSMICG00000038011	RBM38	100	94.907	ENSRNOG00000006420	Rbm38	91	94.907	Rattus_norvegicus
ENSMICG00000038011	RBM38	100	78.241	ENSRROG00000036388	-	89	78.241	Rhinopithecus_roxellana
ENSMICG00000038011	RBM38	100	97.222	ENSSBOG00000031053	RBM38	100	97.222	Saimiri_boliviensis_boliviensis
ENSMICG00000038011	RBM38	98	66.364	ENSSFOG00015004453	rbm38	92	69.545	Scleropages_formosus
ENSMICG00000038011	RBM38	100	58.824	ENSSDUG00000022611	rbm38	93	58.824	Seriola_dumerili
ENSMICG00000038011	RBM38	98	66.953	ENSSDUG00000021082	RBM38	92	66.953	Seriola_dumerili
ENSMICG00000038011	RBM38	98	63.426	ENSSLDG00000010845	rbm38	90	63.426	Seriola_lalandi_dorsalis
ENSMICG00000038011	RBM38	98	66.953	ENSSLDG00000011778	RBM38	92	66.953	Seriola_lalandi_dorsalis
ENSMICG00000038011	RBM38	98	68.075	ENSSPAG00000020989	RBM38	91	70.233	Stegastes_partitus
ENSMICG00000038011	RBM38	100	57.563	ENSSPAG00000011113	rbm38	93	57.563	Stegastes_partitus
ENSMICG00000038011	RBM38	100	96.759	ENSSSCG00000007504	RBM38	90	96.759	Sus_scrofa
ENSMICG00000038011	RBM38	98	67.241	ENSTRUG00000019869	-	92	68.240	Takifugu_rubripes
ENSMICG00000038011	RBM38	83	63.934	ENSTRUG00000024954	rbm38	91	55.895	Takifugu_rubripes
ENSMICG00000038011	RBM38	98	69.683	ENSTNIG00000007093	-	97	70.721	Tetraodon_nigroviridis
ENSMICG00000038011	RBM38	62	94.845	ENSTBEG00000001689	-	55	94.845	Tupaia_belangeri
ENSMICG00000038011	RBM38	100	96.759	ENSUAMG00000019780	RBM38	90	96.759	Ursus_americanus
ENSMICG00000038011	RBM38	100	96.759	ENSVVUG00000017246	RBM38	90	96.759	Vulpes_vulpes
ENSMICG00000038011	RBM38	100	74.324	ENSXETG00000011268	rbm38	99	75.225	Xenopus_tropicalis
ENSMICG00000038011	RBM38	52	87.179	ENSXCOG00000017324	-	53	87.179	Xiphophorus_couchianus
ENSMICG00000038011	RBM38	98	57.627	ENSXMAG00000023662	rbm38	91	57.511	Xiphophorus_maculatus