EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000038221 (Gene tree)
Gene ID: 105863251
Gene Symbol: PCBP1
Alias: HNRPE1|HNRPX|hnRNP-E1|hnRNP-X
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 1071 bases
Position: chr4:16063172-16064242
Accession: 105863251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000022546	KH_1	PF00013.29	2e-51	1	3
ENSMICP00000022546	KH_1	PF00013.29	2e-51	2	3
ENSMICP00000022546	KH_1	PF00013.29	2e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000049910	PCBP1-201	1071	XM_012750148	ENSMICP00000022546	356 (aa)	XP_012605602	UPI000000029F

Gene Model

Click here to download ENSMICG00000038221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000038221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000038221	PCBP1	55	32.353	ENSMICG00000013324	-	63	32.353
ENSMICG00000038221	PCBP1	99	66.027	ENSMICG00000012679	PCBP3	91	66.027
ENSMICG00000038221	PCBP1	66	41.558	ENSMICG00000028720	NOVA2	51	41.558
ENSMICG00000038221	PCBP1	61	30.994	ENSMICG00000015452	-	72	30.994
ENSMICG00000038221	PCBP1	56	32.143	ENSMICG00000049453	-	66	33.696
ENSMICG00000038221	PCBP1	70	40.541	ENSMICG00000034677	NOVA1	60	40.541
ENSMICG00000038221	PCBP1	98	32.738	ENSMICG00000037971	-	76	32.738
ENSMICG00000038221	PCBP1	80	38.776	ENSMICG00000035005	-	79	33.125
ENSMICG00000038221	PCBP1	87	74.359	ENSMICG00000029452	-	96	74.359
ENSMICG00000038221	PCBP1	100	74.860	ENSMICG00000027264	-	100	74.860
ENSMICG00000038221	PCBP1	100	82.834	ENSMICG00000011651	PCBP2	100	82.834
ENSMICG00000038221	PCBP1	98	53.258	ENSMICG00000002686	PCBP4	77	53.258
ENSMICG00000038221	PCBP1	69	34.667	ENSMICG00000007863	KHSRP	56	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000038221	PCBP1	100	100.000	ENSG00000169564	PCBP1	100	100.000	Homo_sapiens
ENSMICG00000038221	PCBP1	100	97.191	ENSAMEG00000016094	PCBP1	100	97.191	Ailuropoda_melanoleuca
ENSMICG00000038221	PCBP1	79	91.873	ENSANAG00000022494	-	100	91.873	Aotus_nancymaae
ENSMICG00000038221	PCBP1	79	95.053	ENSANAG00000019364	-	100	95.053	Aotus_nancymaae
ENSMICG00000038221	PCBP1	100	89.045	ENSANAG00000023938	-	100	89.045	Aotus_nancymaae
ENSMICG00000038221	PCBP1	97	96.243	ENSANAG00000026989	-	99	96.243	Aotus_nancymaae
ENSMICG00000038221	PCBP1	100	88.202	ENSANAG00000026077	-	100	88.202	Aotus_nancymaae
ENSMICG00000038221	PCBP1	89	87.658	ENSANAG00000027108	-	100	87.658	Aotus_nancymaae
ENSMICG00000038221	PCBP1	79	95.053	ENSANAG00000031745	-	100	95.053	Aotus_nancymaae
ENSMICG00000038221	PCBP1	100	85.674	ENSANAG00000033377	-	100	85.674	Aotus_nancymaae
ENSMICG00000038221	PCBP1	91	100.000	ENSBTAG00000008985	PCBP1	99	100.000	Bos_taurus
ENSMICG00000038221	PCBP1	100	94.382	ENSCJAG00000038388	-	95	94.382	Callithrix_jacchus
ENSMICG00000038221	PCBP1	100	99.719	ENSCAFG00000003326	PCBP1	100	99.719	Canis_familiaris
ENSMICG00000038221	PCBP1	100	100.000	ENSCHIG00000007923	PCBP1	100	100.000	Capra_hircus
ENSMICG00000038221	PCBP1	100	99.438	ENSTSYG00000027848	PCBP1	100	99.438	Carlito_syrichta
ENSMICG00000038221	PCBP1	100	100.000	ENSCPOG00000013511	PCBP1	100	100.000	Cavia_porcellus
ENSMICG00000038221	PCBP1	100	100.000	ENSCCAG00000019842	-	100	100.000	Cebus_capucinus
ENSMICG00000038221	PCBP1	100	91.292	ENSCCAG00000029186	-	98	91.292	Cebus_capucinus
ENSMICG00000038221	PCBP1	100	100.000	ENSCATG00000015029	PCBP1	100	100.000	Cercocebus_atys
ENSMICG00000038221	PCBP1	100	99.438	ENSCLAG00000017909	PCBP1	100	99.438	Chinchilla_lanigera
ENSMICG00000038221	PCBP1	100	100.000	ENSCSAG00000019441	PCBP1	100	100.000	Chlorocebus_sabaeus
ENSMICG00000038221	PCBP1	100	100.000	ENSCANG00000018039	-	100	100.000	Colobus_angolensis_palliatus
ENSMICG00000038221	PCBP1	72	84.706	ENSCANG00000033810	-	87	84.706	Colobus_angolensis_palliatus
ENSMICG00000038221	PCBP1	100	89.888	ENSCANG00000032470	-	94	89.888	Colobus_angolensis_palliatus
ENSMICG00000038221	PCBP1	100	100.000	ENSCGRG00001015078	Pcbp1	100	100.000	Cricetulus_griseus_chok1gshd
ENSMICG00000038221	PCBP1	100	100.000	ENSCGRG00000018899	Pcbp1	100	100.000	Cricetulus_griseus_crigri
ENSMICG00000038221	PCBP1	80	99.298	ENSDNOG00000036372	PCBP1	99	99.298	Dasypus_novemcinctus
ENSMICG00000038221	PCBP1	100	100.000	ENSDORG00000008216	Pcbp1	100	100.000	Dipodomys_ordii
ENSMICG00000038221	PCBP1	100	100.000	ENSFCAG00000022238	PCBP1	100	100.000	Felis_catus
ENSMICG00000038221	PCBP1	100	99.719	ENSFDAG00000019637	PCBP1	100	99.719	Fukomys_damarensis
ENSMICG00000038221	PCBP1	100	100.000	ENSGGOG00000028130	PCBP1	100	100.000	Gorilla_gorilla
ENSMICG00000038221	PCBP1	100	99.719	ENSHGLG00000020345	Pcbp1	100	99.719	Heterocephalus_glaber_female
ENSMICG00000038221	PCBP1	100	97.753	ENSHGLG00000020243	-	100	97.753	Heterocephalus_glaber_female
ENSMICG00000038221	PCBP1	100	99.438	ENSHGLG00100019620	-	100	99.438	Heterocephalus_glaber_male
ENSMICG00000038221	PCBP1	100	99.719	ENSHGLG00100019761	Pcbp1	100	99.719	Heterocephalus_glaber_male
ENSMICG00000038221	PCBP1	100	100.000	ENSSTOG00000026002	PCBP1	100	100.000	Ictidomys_tridecemlineatus
ENSMICG00000038221	PCBP1	100	100.000	ENSJJAG00000000737	Pcbp1	100	100.000	Jaculus_jaculus
ENSMICG00000038221	PCBP1	95	88.427	ENSMFAG00000003400	PCBP1	100	88.427	Macaca_fascicularis
ENSMICG00000038221	PCBP1	100	100.000	ENSMMUG00000038295	PCBP1	100	100.000	Macaca_mulatta
ENSMICG00000038221	PCBP1	100	100.000	ENSMNEG00000002934	PCBP1	100	100.000	Macaca_nemestrina
ENSMICG00000038221	PCBP1	100	100.000	ENSMLEG00000027389	PCBP1	100	100.000	Mandrillus_leucophaeus
ENSMICG00000038221	PCBP1	100	99.719	ENSMAUG00000009843	Pcbp1	100	99.719	Mesocricetus_auratus
ENSMICG00000038221	PCBP1	100	100.000	ENSMOCG00000008102	Pcbp1	100	100.000	Microtus_ochrogaster
ENSMICG00000038221	PCBP1	100	100.000	MGP_CAROLIEiJ_G0028598	Pcbp1	100	100.000	Mus_caroli
ENSMICG00000038221	PCBP1	100	100.000	ENSMUSG00000051695	Pcbp1	100	100.000	Mus_musculus
ENSMICG00000038221	PCBP1	100	100.000	MGP_PahariEiJ_G0022335	Pcbp1	100	100.000	Mus_pahari
ENSMICG00000038221	PCBP1	100	100.000	MGP_SPRETEiJ_G0029609	Pcbp1	100	100.000	Mus_spretus
ENSMICG00000038221	PCBP1	100	97.191	ENSMPUG00000007175	PCBP1	100	97.191	Mustela_putorius_furo
ENSMICG00000038221	PCBP1	100	100.000	ENSMLUG00000014173	PCBP1	100	100.000	Myotis_lucifugus
ENSMICG00000038221	PCBP1	100	100.000	ENSNGAG00000014909	-	100	100.000	Nannospalax_galili
ENSMICG00000038221	PCBP1	100	100.000	ENSNGAG00000011957	-	100	100.000	Nannospalax_galili
ENSMICG00000038221	PCBP1	100	100.000	ENSNLEG00000018722	PCBP1	100	100.000	Nomascus_leucogenys
ENSMICG00000038221	PCBP1	100	83.427	ENSODEG00000000263	PCBP1	100	83.427	Octodon_degus
ENSMICG00000038221	PCBP1	100	100.000	ENSOCUG00000003634	PCBP1	100	100.000	Oryctolagus_cuniculus
ENSMICG00000038221	PCBP1	100	97.191	ENSOGAG00000028946	PCBP1	100	97.191	Otolemur_garnettii
ENSMICG00000038221	PCBP1	100	100.000	ENSOARG00000019516	PCBP1	100	100.000	Ovis_aries
ENSMICG00000038221	PCBP1	100	98.034	ENSPPAG00000036116	PCBP1	99	98.599	Pan_paniscus
ENSMICG00000038221	PCBP1	100	100.000	ENSPPRG00000020533	PCBP1	100	100.000	Panthera_pardus
ENSMICG00000038221	PCBP1	100	100.000	ENSPTIG00000007318	PCBP1	100	100.000	Panthera_tigris_altaica
ENSMICG00000038221	PCBP1	100	100.000	ENSPTRG00000012025	PCBP1	100	100.000	Pan_troglodytes
ENSMICG00000038221	PCBP1	100	100.000	ENSPANG00000011314	PCBP1	100	100.000	Papio_anubis
ENSMICG00000038221	PCBP1	100	100.000	ENSPPYG00000012328	PCBP1	100	100.000	Pongo_abelii
ENSMICG00000038221	PCBP1	100	100.000	ENSPCOG00000026934	PCBP1	100	100.000	Propithecus_coquereli
ENSMICG00000038221	PCBP1	100	99.157	ENSRROG00000009684	-	95	99.157	Rhinopithecus_roxellana
ENSMICG00000038221	PCBP1	93	98.795	ENSRROG00000012514	-	100	98.795	Rhinopithecus_roxellana
ENSMICG00000038221	PCBP1	100	83.427	ENSSBOG00000035309	-	94	83.427	Saimiri_boliviensis_boliviensis
ENSMICG00000038221	PCBP1	100	99.719	ENSSSCG00000027224	PCBP1	100	99.719	Sus_scrofa
ENSMICG00000038221	PCBP1	51	100.000	ENSTBEG00000015706	-	51	100.000	Tupaia_belangeri
ENSMICG00000038221	PCBP1	91	99.690	ENSVVUG00000028033	PCBP1	99	99.690	Vulpes_vulpes