EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000038651 (Gene tree)
Gene ID: 105883600
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 11182 bases
Position: chr16:33674440-33685621
Accession: 105883600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000048086	RRM_1	PF00076.22	2.2e-06	1	1
ENSMICP00000024950	RRM_1	PF00076.22	2.2e-06	1	1
ENSMICP00000038101	RRM_1	PF00076.22	3.7e-06	1	1
ENSMICP00000019591	RRM_1	PF00076.22	4.1e-06	1	1
ENSMICP00000021069	RRM_1	PF00076.22	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000038642	RDM1-204	501	-	ENSMICP00000024950	166 (aa)	-	UPI00085B3F75
ENSMICT00000036309	RDM1-203	1144	XM_012786844	ENSMICP00000021069	283 (aa)	XP_012642298	UPI000643B42C
ENSMICT00000031562	RDM1-205	711	-	ENSMICP00000038101	236 (aa)	-	UPI000C2EAB66
ENSMICT00000061602	RDM1-201	1514	-	ENSMICP00000048086	265 (aa)	-	UPI000C2EA1E2
ENSMICT00000035930	RDM1-202	1047	XM_012786845	ENSMICP00000019591	250 (aa)	XP_012642299	UPI00064341F1

Gene Model

Click here to download ENSMICG00000038651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000038651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000038651	RDM1	100	90.580	ENSG00000278023	RDM1	100	92.537	Homo_sapiens
ENSMICG00000038651	RDM1	83	44.366	ENSAPOG00000021886	zgc:103564	84	34.783	Acanthochromis_polyacanthus
ENSMICG00000038651	RDM1	96	35.808	ENSAPEG00000008929	zgc:103564	87	35.169	Amphiprion_percula
ENSMICG00000038651	RDM1	93	53.785	ENSAPLG00000004384	RDM1	95	53.785	Anas_platyrhynchos
ENSMICG00000038651	RDM1	97	48.043	ENSACAG00000012989	-	100	47.857	Anolis_carolinensis
ENSMICG00000038651	RDM1	100	89.130	ENSANAG00000032752	RDM1	100	91.045	Aotus_nancymaae
ENSMICG00000038651	RDM1	100	86.957	ENSBTAG00000000030	RDM1	100	80.702	Bos_taurus
ENSMICG00000038651	RDM1	94	86.937	ENSCJAG00000015031	RDM1	96	92.481	Callithrix_jacchus
ENSMICG00000038651	RDM1	94	74.009	ENSCAFG00000015160	-	100	74.609	Canis_familiaris
ENSMICG00000038651	RDM1	98	87.681	ENSCHIG00000020607	RDM1	100	81.915	Capra_hircus
ENSMICG00000038651	RDM1	100	69.718	ENSCPOG00000001495	-	99	69.718	Cavia_porcellus
ENSMICG00000038651	RDM1	99	84.120	ENSCCAG00000035763	RDM1	96	90.977	Cebus_capucinus
ENSMICG00000038651	RDM1	100	90.580	ENSCATG00000044451	RDM1	100	91.852	Cercocebus_atys
ENSMICG00000038651	RDM1	97	84.047	ENSCSAG00000006209	RDM1	98	84.047	Chlorocebus_sabaeus
ENSMICG00000038651	RDM1	85	56.828	ENSCPBG00000009105	RDM1	96	55.159	Chrysemys_picta_bellii
ENSMICG00000038651	RDM1	100	89.130	ENSCANG00000041322	RDM1	100	90.370	Colobus_angolensis_palliatus
ENSMICG00000038651	RDM1	96	75.735	ENSCGRG00001015927	Rdm1	99	74.912	Cricetulus_griseus_chok1gshd
ENSMICG00000038651	RDM1	96	35.808	ENSCVAG00000001956	zgc:103564	98	34.432	Cyprinodon_variegatus
ENSMICG00000038651	RDM1	100	80.451	ENSDNOG00000045224	-	99	80.451	Dasypus_novemcinctus
ENSMICG00000038651	RDM1	86	81.159	ENSEASG00005010554	RDM1	74	81.159	Equus_asinus_asinus
ENSMICG00000038651	RDM1	94	84.000	ENSECAG00000022182	RDM1	96	80.000	Equus_caballus
ENSMICG00000038651	RDM1	95	74.104	ENSEEUG00000006127	RDM1	100	74.104	Erinaceus_europaeus
ENSMICG00000038651	RDM1	99	84.255	ENSFCAG00000043429	RDM1	96	90.226	Felis_catus
ENSMICG00000038651	RDM1	97	54.152	ENSGALG00000000243	RDM1	97	54.152	Gallus_gallus
ENSMICG00000038651	RDM1	85	53.731	ENSGAGG00000000293	-	78	53.815	Gopherus_agassizii
ENSMICG00000038651	RDM1	100	90.580	ENSGGOG00000010584	RDM1	100	92.537	Gorilla_gorilla
ENSMICG00000038651	RDM1	99	34.397	ENSHCOG00000002518	-	97	35.461	Hippocampus_comes
ENSMICG00000038651	RDM1	100	87.681	ENSSTOG00000022491	RDM1	100	82.746	Ictidomys_tridecemlineatus
ENSMICG00000038651	RDM1	100	80.351	ENSLAFG00000029300	RDM1	100	80.351	Loxodonta_africana
ENSMICG00000038651	RDM1	100	90.580	ENSMFAG00000032968	RDM1	100	91.852	Macaca_fascicularis
ENSMICG00000038651	RDM1	100	90.580	ENSMMUG00000006847	RDM1	100	91.852	Macaca_mulatta
ENSMICG00000038651	RDM1	100	90.580	ENSMNEG00000039977	RDM1	100	91.852	Macaca_nemestrina
ENSMICG00000038651	RDM1	100	90.580	ENSMLEG00000041158	RDM1	100	91.852	Mandrillus_leucophaeus
ENSMICG00000038651	RDM1	92	52.846	ENSMGAG00000008774	RDM1	96	53.061	Meleagris_gallopavo
ENSMICG00000038651	RDM1	99	79.710	ENSMAUG00000018559	Rdm1	99	74.823	Mesocricetus_auratus
ENSMICG00000038651	RDM1	94	74.439	ENSMOCG00000015095	Rdm1	99	71.014	Microtus_ochrogaster
ENSMICG00000038651	RDM1	97	66.376	ENSMODG00000011101	RDM1	100	66.182	Monodelphis_domestica
ENSMICG00000038651	RDM1	99	74.558	MGP_CAROLIEiJ_G0017226	Rdm1	99	74.558	Mus_caroli
ENSMICG00000038651	RDM1	99	74.286	ENSMUSG00000010362	Rdm1	99	74.286	Mus_musculus
ENSMICG00000038651	RDM1	99	73.145	MGP_PahariEiJ_G0018356	Rdm1	99	73.145	Mus_pahari
ENSMICG00000038651	RDM1	99	73.852	MGP_SPRETEiJ_G0018069	Rdm1	99	73.852	Mus_spretus
ENSMICG00000038651	RDM1	100	89.855	ENSMPUG00000008363	RDM1	100	82.867	Mustela_putorius_furo
ENSMICG00000038651	RDM1	100	92.029	ENSNLEG00000014173	RDM1	100	93.333	Nomascus_leucogenys
ENSMICG00000038651	RDM1	94	67.117	ENSMEUG00000015826	RDM1	100	66.800	Notamacropus_eugenii
ENSMICG00000038651	RDM1	94	79.821	ENSOCUG00000022704	RDM1	97	79.762	Oryctolagus_cuniculus
ENSMICG00000038651	RDM1	100	89.085	ENSOGAG00000011332	RDM1	100	89.085	Otolemur_garnettii
ENSMICG00000038651	RDM1	100	91.304	ENSPPAG00000029969	RDM1	100	86.620	Pan_paniscus
ENSMICG00000038651	RDM1	100	91.304	ENSPTRG00000009031	RDM1	100	93.284	Pan_troglodytes
ENSMICG00000038651	RDM1	100	89.855	ENSPANG00000022933	RDM1	100	91.111	Papio_anubis
ENSMICG00000038651	RDM1	96	73.897	ENSPEMG00000018985	Rdm1	98	74.007	Peromyscus_maniculatus_bairdii
ENSMICG00000038651	RDM1	100	90.580	ENSPPYG00000008198	RDM1	100	86.219	Pongo_abelii
ENSMICG00000038651	RDM1	100	93.976	ENSPCOG00000017995	RDM1	100	93.976	Propithecus_coquereli
ENSMICG00000038651	RDM1	97	86.087	ENSPVAG00000001116	RDM1	100	84.861	Pteropus_vampyrus
ENSMICG00000038651	RDM1	99	72.438	ENSRNOG00000020751	Rdm1	99	72.438	Rattus_norvegicus
ENSMICG00000038651	RDM1	100	89.855	ENSRBIG00000030000	RDM1	100	91.111	Rhinopithecus_bieti
ENSMICG00000038651	RDM1	100	89.855	ENSRROG00000035242	RDM1	100	91.111	Rhinopithecus_roxellana
ENSMICG00000038651	RDM1	97	70.909	ENSSHAG00000013584	RDM1	100	70.909	Sarcophilus_harrisii
ENSMICG00000038651	RDM1	93	55.000	ENSSPUG00000010941	RDM1	96	51.311	Sphenodon_punctatus
ENSMICG00000038651	RDM1	96	37.991	ENSSPAG00000011690	-	92	36.719	Stegastes_partitus
ENSMICG00000038651	RDM1	89	73.333	ENSSSCG00000017574	-	93	74.107	Sus_scrofa
ENSMICG00000038651	RDM1	81	81.132	ENSTBEG00000010030	RDM1	99	62.948	Tupaia_belangeri
ENSMICG00000038651	RDM1	100	89.855	ENSUAMG00000027279	RDM1	100	84.507	Ursus_americanus
ENSMICG00000038651	RDM1	100	89.855	ENSUMAG00000015423	RDM1	98	84.507	Ursus_maritimus