EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000038751 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: H/ACA ribonucleoprotein complex subunit 4-like
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 3875 bases
Position: chrX:139290404-139294278
Accession: 105864333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000034860	TruB_N	PF01509.18	8.3e-22	1	1
ENSMICP00000016664	TruB_N	PF01509.18	3.4e-21	1	1
ENSMICP00000049858	TruB_N	PF01509.18	3.4e-21	1	1
ENSMICP00000018391	TruB_N	PF01509.18	4.7e-13	1	1
ENSMICP00000049858	PUA	PF01472.20	4.6e-18	1	1
ENSMICP00000016664	PUA	PF01472.20	4.9e-18	1	1
ENSMICP00000049858	DKCLD	PF08068.12	2.8e-31	1	1
ENSMICP00000016664	DKCLD	PF08068.12	2.9e-31	1	1
ENSMICP00000018391	DKCLD	PF08068.12	3.7e-31	1	1
ENSMICP00000034860	DKCLD	PF08068.12	6.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000046573	-	1560	XM_012752178	ENSMICP00000016664	519 (aa)	XP_012607632	UPI00085B2D4E
ENSMICT00000052559	-	990	-	ENSMICP00000034860	329 (aa)	-	UPI000C2EB42E
ENSMICT00000062144	-	1506	-	ENSMICP00000049858	501 (aa)	-	UPI000C2ED53C
ENSMICT00000030605	-	708	-	ENSMICP00000018391	235 (aa)	-	UPI000C2EAE88

Gene Model

Click here to download ENSMICG00000038751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000038751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000038751	-	89	87.312	ENSMICG00000002818	-	99	87.312

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000038751	-	100	92.678	ENSG00000130826	DKC1	99	97.561	Homo_sapiens
ENSMICG00000038751	-	80	85.500	ENSAPOG00000007799	dkc1	91	76.211	Acanthochromis_polyacanthus
ENSMICG00000038751	-	92	93.492	ENSAMEG00000002776	DKC1	100	90.551	Ailuropoda_melanoleuca
ENSMICG00000038751	-	87	80.230	ENSACIG00000022614	dkc1	86	80.230	Amphilophus_citrinellus
ENSMICG00000038751	-	80	85.250	ENSAOCG00000013159	dkc1	80	85.101	Amphiprion_ocellaris
ENSMICG00000038751	-	80	85.250	ENSAPEG00000002284	dkc1	81	85.101	Amphiprion_percula
ENSMICG00000038751	-	81	83.293	ENSATEG00000013682	dkc1	81	83.293	Anabas_testudineus
ENSMICG00000038751	-	88	83.333	ENSACAG00000015600	DKC1	77	83.778	Anolis_carolinensis
ENSMICG00000038751	-	100	91.137	ENSANAG00000022732	DKC1	100	91.137	Aotus_nancymaae
ENSMICG00000038751	-	79	85.859	ENSACLG00000015605	dkc1	81	85.427	Astatotilapia_calliptera
ENSMICG00000038751	-	82	84.352	ENSAMXG00000017108	dkc1	79	85.464	Astyanax_mexicanus
ENSMICG00000038751	-	96	90.612	ENSBTAG00000013045	DKC1	97	90.612	Bos_taurus
ENSMICG00000038751	-	82	66.344	WBGene00010478	K01G5.5	98	63.532	Caenorhabditis_elegans
ENSMICG00000038751	-	100	91.538	ENSCJAG00000004210	DKC1	100	91.538	Callithrix_jacchus
ENSMICG00000038751	-	97	77.844	ENSCAFG00000009311	-	96	77.645	Canis_familiaris
ENSMICG00000038751	-	100	89.981	ENSCAFG00000019620	-	100	89.595	Canis_familiaris
ENSMICG00000038751	-	97	77.246	ENSCAFG00020009379	-	92	77.046	Canis_lupus_dingo
ENSMICG00000038751	-	100	89.981	ENSCAFG00020008918	-	100	89.595	Canis_lupus_dingo
ENSMICG00000038751	-	100	89.764	ENSCHIG00000017392	DKC1	100	90.354	Capra_hircus
ENSMICG00000038751	-	99	92.322	ENSTSYG00000007681	DKC1	99	92.322	Carlito_syrichta
ENSMICG00000038751	-	88	88.764	ENSCAPG00000003342	DKC1	99	91.591	Cavia_aperea
ENSMICG00000038751	-	97	91.417	ENSCPOG00000008825	DKC1	100	90.559	Cavia_porcellus
ENSMICG00000038751	-	100	83.815	ENSCCAG00000027418	DKC1	100	83.815	Cebus_capucinus
ENSMICG00000038751	-	100	92.100	ENSCATG00000033602	DKC1	100	92.100	Cercocebus_atys
ENSMICG00000038751	-	99	91.423	ENSCLAG00000000720	DKC1	100	91.423	Chinchilla_lanigera
ENSMICG00000038751	-	100	92.293	ENSCSAG00000006706	DKC1	100	92.293	Chlorocebus_sabaeus
ENSMICG00000038751	-	93	82.833	ENSCPBG00000005858	DKC1	93	86.652	Chrysemys_picta_bellii
ENSMICG00000038751	-	86	73.333	ENSCING00000004599	-	91	68.432	Ciona_intestinalis
ENSMICG00000038751	-	92	68.476	ENSCSAVG00000010047	-	88	77.215	Ciona_savignyi
ENSMICG00000038751	-	100	92.293	ENSCANG00000027987	DKC1	100	92.293	Colobus_angolensis_palliatus
ENSMICG00000038751	-	97	89.820	ENSCGRG00001014574	-	97	89.820	Cricetulus_griseus_chok1gshd
ENSMICG00000038751	-	96	64.859	ENSCGRG00001016789	-	98	63.655	Cricetulus_griseus_chok1gshd
ENSMICG00000038751	-	97	89.820	ENSCGRG00000016075	-	97	89.820	Cricetulus_griseus_crigri
ENSMICG00000038751	-	98	64.244	ENSCGRG00000014809	-	96	63.473	Cricetulus_griseus_crigri
ENSMICG00000038751	-	92	76.042	ENSCSEG00000012633	dkc1	92	81.149	Cynoglossus_semilaevis
ENSMICG00000038751	-	80	84.461	ENSCVAG00000010155	dkc1	77	85.101	Cyprinodon_variegatus
ENSMICG00000038751	-	80	85.037	ENSDARG00000016484	dkc1	79	85.464	Danio_rerio
ENSMICG00000038751	-	100	90.559	ENSDNOG00000004218	DKC1	100	90.366	Dasypus_novemcinctus
ENSMICG00000038751	-	66	95.392	ENSDORG00000013566	-	100	82.667	Dipodomys_ordii
ENSMICG00000038751	-	80	72.932	FBgn0259937	Nop60B	96	66.364	Drosophila_melanogaster
ENSMICG00000038751	-	92	86.510	ENSETEG00000016095	DKC1	99	84.909	Echinops_telfairi
ENSMICG00000038751	-	77	76.587	ENSEBUG00000015962	dkc1	99	81.911	Eptatretus_burgeri
ENSMICG00000038751	-	100	91.571	ENSEASG00005007484	DKC1	100	91.379	Equus_asinus_asinus
ENSMICG00000038751	-	100	91.571	ENSECAG00000023524	DKC1	100	91.379	Equus_caballus
ENSMICG00000038751	-	85	88.679	ENSEEUG00000003323	DKC1	99	88.679	Erinaceus_europaeus
ENSMICG00000038751	-	83	82.143	ENSELUG00000014538	dkc1	87	80.886	Esox_lucius
ENSMICG00000038751	-	100	89.764	ENSFCAG00000006577	DKC1	100	89.764	Felis_catus
ENSMICG00000038751	-	86	82.688	ENSFALG00000011496	DKC1	92	77.867	Ficedula_albicollis
ENSMICG00000038751	-	96	91.129	ENSFDAG00000002516	DKC1	100	91.051	Fukomys_damarensis
ENSMICG00000038751	-	79	84.383	ENSFHEG00000004627	dkc1	83	81.905	Fundulus_heteroclitus
ENSMICG00000038751	-	78	82.609	ENSGMOG00000017277	dkc1	100	82.609	Gadus_morhua
ENSMICG00000038751	-	87	84.897	ENSGALG00000005054	DKC1	85	84.009	Gallus_gallus
ENSMICG00000038751	-	80	84.461	ENSGAFG00000011486	dkc1	69	84.461	Gambusia_affinis
ENSMICG00000038751	-	79	85.930	ENSGACG00000004373	dkc1	96	88.450	Gasterosteus_aculeatus
ENSMICG00000038751	-	93	83.047	ENSGAGG00000011330	DKC1	89	83.404	Gopherus_agassizii
ENSMICG00000038751	-	100	92.678	ENSGGOG00000001045	DKC1	100	92.678	Gorilla_gorilla
ENSMICG00000038751	-	87	79.634	ENSHBUG00000012436	dkc1	86	79.634	Haplochromis_burtoni
ENSMICG00000038751	-	97	90.020	ENSHGLG00000000649	DKC1	100	90.769	Heterocephalus_glaber_female
ENSMICG00000038751	-	95	89.899	ENSHGLG00100001153	DKC1	100	90.661	Heterocephalus_glaber_male
ENSMICG00000038751	-	79	86.076	ENSHCOG00000021099	dkc1	85	80.876	Hippocampus_comes
ENSMICG00000038751	-	91	78.384	ENSIPUG00000010309	dkc1	88	78.384	Ictalurus_punctatus
ENSMICG00000038751	-	100	83.430	ENSSTOG00000020149	-	100	83.044	Ictidomys_tridecemlineatus
ENSMICG00000038751	-	97	82.505	ENSSTOG00000011904	-	93	82.505	Ictidomys_tridecemlineatus
ENSMICG00000038751	-	95	92.683	ENSSTOG00000001074	-	100	92.683	Ictidomys_tridecemlineatus
ENSMICG00000038751	-	65	69.737	ENSJJAG00000008207	-	100	68.354	Jaculus_jaculus
ENSMICG00000038751	-	66	95.853	ENSJJAG00000010086	-	100	83.333	Jaculus_jaculus
ENSMICG00000038751	-	87	78.588	ENSKMAG00000008010	dkc1	86	78.588	Kryptolebias_marmoratus
ENSMICG00000038751	-	86	79.677	ENSLBEG00000019122	dkc1	92	77.948	Labrus_bergylta
ENSMICG00000038751	-	83	85.511	ENSLACG00000014025	DKC1	91	87.940	Latimeria_chalumnae
ENSMICG00000038751	-	87	81.364	ENSLOCG00000013713	dkc1	88	82.751	Lepisosteus_oculatus
ENSMICG00000038751	-	96	90.020	ENSLAFG00000000221	DKC1	99	89.147	Loxodonta_africana
ENSMICG00000038751	-	100	92.100	ENSMFAG00000032398	DKC1	86	92.100	Macaca_fascicularis
ENSMICG00000038751	-	100	92.293	ENSMMUG00000005768	DKC1	100	92.293	Macaca_mulatta
ENSMICG00000038751	-	100	92.293	ENSMNEG00000034503	DKC1	100	92.293	Macaca_nemestrina
ENSMICG00000038751	-	100	92.293	ENSMLEG00000034422	DKC1	100	92.293	Mandrillus_leucophaeus
ENSMICG00000038751	-	81	84.975	ENSMAMG00000005427	dkc1	90	85.572	Mastacembelus_armatus
ENSMICG00000038751	-	87	79.863	ENSMZEG00005014503	dkc1	86	79.863	Maylandia_zebra
ENSMICG00000038751	-	79	85.101	ENSMGAG00000009238	DKC1	87	83.538	Meleagris_gallopavo
ENSMICG00000038751	-	66	95.392	ENSMAUG00000016454	-	100	83.000	Mesocricetus_auratus
ENSMICG00000038751	-	65	93.421	ENSMOCG00000001169	-	100	80.000	Microtus_ochrogaster
ENSMICG00000038751	-	79	85.427	ENSMMOG00000020348	dkc1	87	85.427	Mola_mola
ENSMICG00000038751	-	90	84.802	ENSMODG00000009243	DKC1	75	87.879	Monodelphis_domestica
ENSMICG00000038751	-	81	83.824	ENSMALG00000009454	dkc1	81	83.824	Monopterus_albus
ENSMICG00000038751	-	97	77.996	MGP_CAROLIEiJ_G0033191	Dkc1	100	92.568	Mus_caroli
ENSMICG00000038751	-	97	88.822	ENSMUSG00000031403	Dkc1	97	89.022	Mus_musculus
ENSMICG00000038751	-	97	88.224	MGP_PahariEiJ_G0031735	Dkc1	97	89.421	Mus_pahari
ENSMICG00000038751	-	97	88.423	MGP_SPRETEiJ_G0034351	Dkc1	97	89.621	Mus_spretus
ENSMICG00000038751	-	96	89.861	ENSMPUG00000016136	DKC1	93	89.861	Mustela_putorius_furo
ENSMICG00000038751	-	91	86.551	ENSMLUG00000011918	DKC1	100	82.890	Myotis_lucifugus
ENSMICG00000038751	-	66	95.853	ENSNGAG00000015724	-	100	83.333	Nannospalax_galili
ENSMICG00000038751	-	79	86.364	ENSNBRG00000005638	dkc1	80	85.930	Neolamprologus_brichardi
ENSMICG00000038751	-	100	92.678	ENSNLEG00000014323	DKC1	100	92.678	Nomascus_leucogenys
ENSMICG00000038751	-	85	84.065	ENSMEUG00000001066	DKC1	95	82.028	Notamacropus_eugenii
ENSMICG00000038751	-	89	89.617	ENSOPRG00000005248	DKC1	90	89.617	Ochotona_princeps
ENSMICG00000038751	-	87	94.483	ENSODEG00000011816	-	91	91.613	Octodon_degus
ENSMICG00000038751	-	66	97.235	ENSODEG00000000549	-	100	84.333	Octodon_degus
ENSMICG00000038751	-	87	81.735	ENSONIG00000013889	dkc1	86	81.735	Oreochromis_niloticus
ENSMICG00000038751	-	92	84.298	ENSOANG00000008713	-	96	84.355	Ornithorhynchus_anatinus
ENSMICG00000038751	-	66	62.674	ENSOANG00000022295	-	95	62.069	Ornithorhynchus_anatinus
ENSMICG00000038751	-	97	92.016	ENSOCUG00000012646	DKC1	100	91.406	Oryctolagus_cuniculus
ENSMICG00000038751	-	86	79.767	ENSORLG00000018748	dkc1	84	79.263	Oryzias_latipes
ENSMICG00000038751	-	80	83.871	ENSOMEG00000005786	dkc1	82	84.937	Oryzias_melastigma
ENSMICG00000038751	-	97	92.688	ENSOGAG00000003399	DKC1	100	91.794	Otolemur_garnettii
ENSMICG00000038751	-	100	88.780	ENSOARG00000003047	DKC1	100	89.370	Ovis_aries
ENSMICG00000038751	-	100	92.293	ENSPPAG00000023820	DKC1	100	92.293	Pan_paniscus
ENSMICG00000038751	-	92	93.059	ENSPPRG00000009104	DKC1	100	89.961	Panthera_pardus
ENSMICG00000038751	-	91	89.693	ENSPTIG00000017469	DKC1	99	87.276	Panthera_tigris_altaica
ENSMICG00000038751	-	100	92.678	ENSPTRG00000022449	DKC1	100	92.678	Pan_troglodytes
ENSMICG00000038751	-	97	93.014	ENSPTRG00000043416	-	84	93.014	Pan_troglodytes
ENSMICG00000038751	-	100	92.293	ENSPANG00000011978	DKC1	100	92.293	Papio_anubis
ENSMICG00000038751	-	79	87.310	ENSPKIG00000008443	dkc1	84	87.089	Paramormyrops_kingsleyae
ENSMICG00000038751	-	73	89.785	ENSPSIG00000013765	DKC1	86	92.717	Pelodiscus_sinensis
ENSMICG00000038751	-	92	72.068	ENSPMGG00000004097	dkc1	81	74.720	Periophthalmus_magnuspinnatus
ENSMICG00000038751	-	65	94.737	ENSPEMG00000013348	Dkc1	96	56.436	Peromyscus_maniculatus_bairdii
ENSMICG00000038751	-	89	87.025	ENSPCIG00000016706	DKC1	76	86.062	Phascolarctos_cinereus
ENSMICG00000038751	-	80	84.750	ENSPFOG00000018653	dkc1	80	84.750	Poecilia_formosa
ENSMICG00000038751	-	80	84.750	ENSPLAG00000003272	dkc1	72	84.750	Poecilia_latipinna
ENSMICG00000038751	-	80	84.750	ENSPMEG00000010413	dkc1	89	79.007	Poecilia_mexicana
ENSMICG00000038751	-	87	78.851	ENSPREG00000004100	dkc1	84	78.851	Poecilia_reticulata
ENSMICG00000038751	-	99	92.412	ENSPPYG00000020892	DKC1	100	92.412	Pongo_abelii
ENSMICG00000038751	-	75	94.118	ENSPCAG00000015034	DKC1	73	94.118	Procavia_capensis
ENSMICG00000038751	-	100	94.220	ENSPCOG00000026874	DKC1	100	94.220	Propithecus_coquereli
ENSMICG00000038751	-	97	88.822	ENSPVAG00000009222	DKC1	97	88.623	Pteropus_vampyrus
ENSMICG00000038751	-	87	79.412	ENSPNYG00000020063	dkc1	88	79.864	Pundamilia_nyererei
ENSMICG00000038751	-	91	79.476	ENSPNAG00000005780	dkc1	87	79.476	Pygocentrus_nattereri
ENSMICG00000038751	-	96	79.513	ENSRNOG00000055562	Dkc1	97	78.571	Rattus_norvegicus
ENSMICG00000038751	-	100	92.293	ENSRBIG00000028457	DKC1	86	92.293	Rhinopithecus_bieti
ENSMICG00000038751	-	100	92.293	ENSRROG00000044780	DKC1	100	92.293	Rhinopithecus_roxellana
ENSMICG00000038751	-	77	70.833	YLR175W	-	98	61.783	Saccharomyces_cerevisiae
ENSMICG00000038751	-	100	91.346	ENSSBOG00000033746	DKC1	100	91.346	Saimiri_boliviensis_boliviensis
ENSMICG00000038751	-	91	84.749	ENSSHAG00000002463	DKC1	97	84.934	Sarcophilus_harrisii
ENSMICG00000038751	-	87	82.529	ENSSFOG00015009585	dkc1	85	82.529	Scleropages_formosus
ENSMICG00000038751	-	80	85.536	ENSSMAG00000002552	dkc1	82	84.029	Scophthalmus_maximus
ENSMICG00000038751	-	81	84.691	ENSSDUG00000009963	dkc1	85	82.135	Seriola_dumerili
ENSMICG00000038751	-	78	86.260	ENSSLDG00000019342	dkc1	92	79.596	Seriola_lalandi_dorsalis
ENSMICG00000038751	-	95	80.658	ENSSARG00000001822	DKC1	97	81.010	Sorex_araneus
ENSMICG00000038751	-	89	82.589	ENSSPUG00000018907	DKC1	86	82.857	Sphenodon_punctatus
ENSMICG00000038751	-	79	86.076	ENSSPAG00000002585	dkc1	75	86.076	Stegastes_partitus
ENSMICG00000038751	-	100	89.866	ENSSSCG00000012823	DKC1	100	89.675	Sus_scrofa
ENSMICG00000038751	-	79	84.596	ENSTGUG00000006781	DKC1	96	79.605	Taeniopygia_guttata
ENSMICG00000038751	-	80	85.037	ENSTRUG00000004413	dkc1	81	85.037	Takifugu_rubripes
ENSMICG00000038751	-	79	69.154	ENSTNIG00000002582	dkc1	84	65.972	Tetraodon_nigroviridis
ENSMICG00000038751	-	71	89.160	ENSTBEG00000011262	DKC1	100	88.889	Tupaia_belangeri
ENSMICG00000038751	-	79	89.615	ENSTTRG00000008089	DKC1	73	90.820	Tursiops_truncatus
ENSMICG00000038751	-	95	91.919	ENSUAMG00000022721	DKC1	95	94.457	Ursus_americanus
ENSMICG00000038751	-	95	91.717	ENSUMAG00000016899	DKC1	99	91.646	Ursus_maritimus
ENSMICG00000038751	-	63	96.644	ENSVPAG00000003259	-	65	97.917	Vicugna_pacos
ENSMICG00000038751	-	97	72.763	ENSVVUG00000021671	-	91	73.824	Vulpes_vulpes
ENSMICG00000038751	-	99	88.868	ENSVVUG00000020734	-	89	88.292	Vulpes_vulpes
ENSMICG00000038751	-	92	80.260	ENSXETG00000032517	DKC1	83	85.817	Xenopus_tropicalis
ENSMICG00000038751	-	87	78.947	ENSXCOG00000005498	dkc1	92	78.947	Xiphophorus_couchianus
ENSMICG00000038751	-	80	84.712	ENSXMAG00000004919	dkc1	80	84.712	Xiphophorus_maculatus