EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000041489 (Gene tree)
Gene ID: 105860686
Gene Symbol: -
Alias: -
Full Name: splicing factor 45 pseudogene
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 1427 bases
Position: chr9:41218406-41219832
Accession: 105860686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000043359	RRM_1	PF00076.22	7e-05	1	1
ENSMICP00000043359	G-patch	PF01585.23	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000063413	-	1427	-	ENSMICP00000043359	409 (aa)	-	UPI000C2ECD98

Gene Model

Click here to download ENSMICG00000041489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000041489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000041489	-	100	91.932	ENSMICG00000003976	-	100	91.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000041489	-	100	90.220	ENSG00000134453	RBM17	100	92.019	Homo_sapiens
ENSMICG00000041489	-	99	76.156	ENSAPOG00000007101	rbm17	99	76.341	Acanthochromis_polyacanthus
ENSMICG00000041489	-	100	89.976	ENSAMEG00000002107	RBM17	100	89.976	Ailuropoda_melanoleuca
ENSMICG00000041489	-	100	72.289	ENSACIG00000006251	rbm17	100	72.289	Amphilophus_citrinellus
ENSMICG00000041489	-	100	76.329	ENSAOCG00000014892	rbm17	100	76.329	Amphiprion_ocellaris
ENSMICG00000041489	-	100	76.329	ENSAPEG00000022779	rbm17	100	76.329	Amphiprion_percula
ENSMICG00000041489	-	100	73.882	ENSATEG00000004406	rbm17	100	73.882	Anabas_testudineus
ENSMICG00000041489	-	100	87.775	ENSAPLG00000004190	RBM17	100	87.775	Anas_platyrhynchos
ENSMICG00000041489	-	89	82.842	ENSACAG00000005418	RBM17	99	82.842	Anolis_carolinensis
ENSMICG00000041489	-	100	90.465	ENSANAG00000030127	RBM17	100	90.465	Aotus_nancymaae
ENSMICG00000041489	-	100	77.561	ENSANAG00000019330	-	97	84.874	Aotus_nancymaae
ENSMICG00000041489	-	100	74.155	ENSACLG00000003928	rbm17	100	74.155	Astatotilapia_calliptera
ENSMICG00000041489	-	100	71.596	ENSAMXG00000005853	rbm17	100	74.178	Astyanax_mexicanus
ENSMICG00000041489	-	100	89.976	ENSBTAG00000021951	RBM17	100	89.976	Bos_taurus
ENSMICG00000041489	-	100	88.509	ENSBTAG00000011094	-	100	88.509	Bos_taurus
ENSMICG00000041489	-	92	30.457	WBGene00010233	F58B3.7	91	30.203	Caenorhabditis_elegans
ENSMICG00000041489	-	100	90.465	ENSCJAG00000020573	RBM17	100	90.465	Callithrix_jacchus
ENSMICG00000041489	-	100	89.976	ENSCAFG00000005206	RBM17	100	89.976	Canis_familiaris
ENSMICG00000041489	-	100	86.308	ENSCAFG00020005420	RBM17	100	86.553	Canis_lupus_dingo
ENSMICG00000041489	-	100	89.976	ENSCHIG00000023204	-	100	89.976	Capra_hircus
ENSMICG00000041489	-	100	87.286	ENSCHIG00000019921	-	100	87.286	Capra_hircus
ENSMICG00000041489	-	100	90.220	ENSTSYG00000001165	RBM17	100	90.220	Carlito_syrichta
ENSMICG00000041489	-	96	69.720	ENSCAPG00000006275	RBM17	100	74.185	Cavia_aperea
ENSMICG00000041489	-	100	87.136	ENSCPOG00000005679	RBM17	100	87.136	Cavia_porcellus
ENSMICG00000041489	-	100	90.465	ENSCCAG00000018655	RBM17	100	90.465	Cebus_capucinus
ENSMICG00000041489	-	100	90.220	ENSCATG00000041566	RBM17	100	90.220	Cercocebus_atys
ENSMICG00000041489	-	100	90.465	ENSCLAG00000012195	RBM17	99	90.465	Chinchilla_lanigera
ENSMICG00000041489	-	100	90.220	ENSCSAG00000013564	RBM17	100	90.220	Chlorocebus_sabaeus
ENSMICG00000041489	-	92	71.164	ENSCHOG00000005131	RBM17	100	71.164	Choloepus_hoffmanni
ENSMICG00000041489	-	100	86.308	ENSCPBG00000019836	RBM17	100	86.308	Chrysemys_picta_bellii
ENSMICG00000041489	-	100	44.258	ENSCSAVG00000008782	-	100	42.823	Ciona_savignyi
ENSMICG00000041489	-	100	89.976	ENSCANG00000030987	RBM17	100	89.976	Colobus_angolensis_palliatus
ENSMICG00000041489	-	98	77.250	ENSCANG00000023715	-	100	77.250	Colobus_angolensis_palliatus
ENSMICG00000041489	-	100	90.954	ENSCGRG00001013842	Rbm17	100	90.954	Cricetulus_griseus_chok1gshd
ENSMICG00000041489	-	100	69.927	ENSCGRG00001009256	-	100	68.215	Cricetulus_griseus_chok1gshd
ENSMICG00000041489	-	100	90.954	ENSCGRG00000006907	Rbm17	100	90.954	Cricetulus_griseus_crigri
ENSMICG00000041489	-	100	74.171	ENSCSEG00000018164	rbm17	100	74.882	Cynoglossus_semilaevis
ENSMICG00000041489	-	100	70.388	ENSCVAG00000002476	rbm17	100	70.631	Cyprinodon_variegatus
ENSMICG00000041489	-	100	72.535	ENSDARG00000031346	rbm17	100	72.535	Danio_rerio
ENSMICG00000041489	-	100	89.731	ENSDNOG00000035920	RBM17	100	89.731	Dasypus_novemcinctus
ENSMICG00000041489	-	99	34.169	FBgn0086683	Spf45	99	34.169	Drosophila_melanogaster
ENSMICG00000041489	-	100	67.971	ENSETEG00000006642	RBM17	100	67.971	Echinops_telfairi
ENSMICG00000041489	-	63	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSMICG00000041489	-	92	86.508	ENSEASG00005009236	-	100	86.508	Equus_asinus_asinus
ENSMICG00000041489	-	100	86.553	ENSEASG00005019205	-	100	86.064	Equus_asinus_asinus
ENSMICG00000041489	-	100	77.017	ENSECAG00000008939	RBM17	100	77.506	Equus_caballus
ENSMICG00000041489	-	100	79.707	ENSECAG00000001379	-	100	79.707	Equus_caballus
ENSMICG00000041489	-	86	73.295	ENSEEUG00000013077	RBM17	100	73.295	Erinaceus_europaeus
ENSMICG00000041489	-	100	70.872	ENSELUG00000006440	rbm17	100	71.724	Esox_lucius
ENSMICG00000041489	-	100	89.976	ENSFCAG00000031988	RBM17	100	89.976	Felis_catus
ENSMICG00000041489	-	100	86.064	ENSFALG00000001790	RBM17	100	86.064	Ficedula_albicollis
ENSMICG00000041489	-	100	90.465	ENSFDAG00000007470	RBM17	100	90.465	Fukomys_damarensis
ENSMICG00000041489	-	100	73.647	ENSFHEG00000001266	rbm17	100	72.791	Fundulus_heteroclitus
ENSMICG00000041489	-	99	71.090	ENSGMOG00000008438	rbm17	100	71.090	Gadus_morhua
ENSMICG00000041489	-	100	87.286	ENSGALG00000006332	RBM17	100	87.286	Gallus_gallus
ENSMICG00000041489	-	100	75.121	ENSGAFG00000019879	rbm17	100	75.121	Gambusia_affinis
ENSMICG00000041489	-	100	74.155	ENSGACG00000019174	rbm17	100	74.155	Gasterosteus_aculeatus
ENSMICG00000041489	-	100	86.308	ENSGAGG00000019906	RBM17	100	86.308	Gopherus_agassizii
ENSMICG00000041489	-	100	76.812	ENSHBUG00000016624	rbm17	100	76.812	Haplochromis_burtoni
ENSMICG00000041489	-	100	90.465	ENSHGLG00000011580	RBM17	100	90.465	Heterocephalus_glaber_female
ENSMICG00000041489	-	100	90.465	ENSHGLG00100010460	RBM17	100	90.465	Heterocephalus_glaber_male
ENSMICG00000041489	-	100	68.949	ENSHGLG00100010556	-	100	67.237	Heterocephalus_glaber_male
ENSMICG00000041489	-	99	72.857	ENSHCOG00000010865	rbm17	100	73.095	Hippocampus_comes
ENSMICG00000041489	-	100	71.963	ENSIPUG00000007699	Rbm17	100	71.963	Ictalurus_punctatus
ENSMICG00000041489	-	100	90.954	ENSSTOG00000013591	RBM17	100	90.954	Ictidomys_tridecemlineatus
ENSMICG00000041489	-	100	67.971	ENSJJAG00000000993	-	100	64.964	Jaculus_jaculus
ENSMICG00000041489	-	100	90.954	ENSJJAG00000022886	Rbm17	100	90.954	Jaculus_jaculus
ENSMICG00000041489	-	100	72.941	ENSKMAG00000021400	rbm17	100	73.882	Kryptolebias_marmoratus
ENSMICG00000041489	-	100	75.604	ENSLBEG00000000881	rbm17	100	73.364	Labrus_bergylta
ENSMICG00000041489	-	99	65.023	ENSLACG00000017297	RBM17	99	65.023	Latimeria_chalumnae
ENSMICG00000041489	-	100	79.126	ENSLOCG00000015659	rbm17	100	79.126	Lepisosteus_oculatus
ENSMICG00000041489	-	100	91.198	ENSLAFG00000011629	RBM17	100	91.198	Loxodonta_africana
ENSMICG00000041489	-	100	90.220	ENSMFAG00000035521	RBM17	100	90.220	Macaca_fascicularis
ENSMICG00000041489	-	100	90.220	ENSMMUG00000015152	RBM17	100	90.220	Macaca_mulatta
ENSMICG00000041489	-	100	90.220	ENSMNEG00000017264	RBM17	100	90.220	Macaca_nemestrina
ENSMICG00000041489	-	100	90.220	ENSMLEG00000029340	RBM17	100	90.220	Mandrillus_leucophaeus
ENSMICG00000041489	-	100	73.647	ENSMAMG00000000387	rbm17	100	73.647	Mastacembelus_armatus
ENSMICG00000041489	-	100	75.177	ENSMZEG00005015179	rbm17	100	75.177	Maylandia_zebra
ENSMICG00000041489	-	100	86.618	ENSMGAG00000003981	RBM17	100	86.618	Meleagris_gallopavo
ENSMICG00000041489	-	100	90.954	ENSMAUG00000019247	Rbm17	100	90.954	Mesocricetus_auratus
ENSMICG00000041489	-	100	90.954	ENSMOCG00000011847	Rbm17	100	90.954	Microtus_ochrogaster
ENSMICG00000041489	-	93	74.406	ENSMOCG00000014517	-	99	74.406	Microtus_ochrogaster
ENSMICG00000041489	-	100	69.212	ENSMMOG00000010264	rbm17	100	68.019	Mola_mola
ENSMICG00000041489	-	100	88.753	ENSMODG00000016648	RBM17	100	88.753	Monodelphis_domestica
ENSMICG00000041489	-	100	72.535	ENSMALG00000010597	rbm17	100	72.535	Monopterus_albus
ENSMICG00000041489	-	100	90.465	MGP_CAROLIEiJ_G0023173	Rbm17	100	90.465	Mus_caroli
ENSMICG00000041489	-	100	90.465	ENSMUSG00000037197	Rbm17	100	90.465	Mus_musculus
ENSMICG00000041489	-	100	90.220	MGP_PahariEiJ_G0019233	Rbm17	100	90.220	Mus_pahari
ENSMICG00000041489	-	100	90.465	MGP_SPRETEiJ_G0024091	Rbm17	100	90.465	Mus_spretus
ENSMICG00000041489	-	87	90.113	ENSMPUG00000016359	RBM17	97	90.113	Mustela_putorius_furo
ENSMICG00000041489	-	100	88.780	ENSMLUG00000002302	-	100	88.780	Myotis_lucifugus
ENSMICG00000041489	-	100	85.086	ENSMLUG00000025709	-	100	83.619	Myotis_lucifugus
ENSMICG00000041489	-	100	62.103	ENSNGAG00000000663	-	100	62.927	Nannospalax_galili
ENSMICG00000041489	-	100	90.954	ENSNGAG00000000741	Rbm17	100	90.954	Nannospalax_galili
ENSMICG00000041489	-	100	71.602	ENSNBRG00000018148	rbm17	100	71.602	Neolamprologus_brichardi
ENSMICG00000041489	-	100	90.220	ENSNLEG00000033350	RBM17	100	90.220	Nomascus_leucogenys
ENSMICG00000041489	-	100	84.352	ENSMEUG00000011347	RBM17	100	84.352	Notamacropus_eugenii
ENSMICG00000041489	-	100	77.262	ENSOPRG00000002993	RBM17	100	77.262	Ochotona_princeps
ENSMICG00000041489	-	97	68.766	ENSODEG00000007286	-	99	68.766	Octodon_degus
ENSMICG00000041489	-	100	89.756	ENSODEG00000004393	RBM17	100	89.756	Octodon_degus
ENSMICG00000041489	-	100	76.812	ENSONIG00000011838	rbm17	100	76.812	Oreochromis_niloticus
ENSMICG00000041489	-	100	88.020	ENSOANG00000015455	RBM17	100	88.020	Ornithorhynchus_anatinus
ENSMICG00000041489	-	100	75.294	ENSORLG00000028798	rbm17	100	75.294	Oryzias_latipes
ENSMICG00000041489	-	100	73.647	ENSORLG00020004593	rbm17	100	73.058	Oryzias_latipes_hni
ENSMICG00000041489	-	100	77.053	ENSORLG00015000033	rbm17	100	77.053	Oryzias_latipes_hsok
ENSMICG00000041489	-	100	75.059	ENSOMEG00000012060	rbm17	100	78.313	Oryzias_melastigma
ENSMICG00000041489	-	100	91.443	ENSOGAG00000015687	RBM17	100	91.443	Otolemur_garnettii
ENSMICG00000041489	-	100	89.976	ENSOARG00000012975	RBM17	100	89.976	Ovis_aries
ENSMICG00000041489	-	100	90.220	ENSPPAG00000032347	RBM17	100	90.220	Pan_paniscus
ENSMICG00000041489	-	100	89.976	ENSPPRG00000010706	RBM17	100	89.976	Panthera_pardus
ENSMICG00000041489	-	100	89.976	ENSPTIG00000007596	RBM17	100	89.976	Panthera_tigris_altaica
ENSMICG00000041489	-	100	90.220	ENSPTRG00000002265	RBM17	100	90.220	Pan_troglodytes
ENSMICG00000041489	-	100	90.220	ENSPANG00000023425	RBM17	100	90.220	Papio_anubis
ENSMICG00000041489	-	100	75.117	ENSPKIG00000025526	rbm17	100	74.941	Paramormyrops_kingsleyae
ENSMICG00000041489	-	100	72.600	ENSPKIG00000005048	-	100	72.600	Paramormyrops_kingsleyae
ENSMICG00000041489	-	100	85.194	ENSPSIG00000012332	RBM17	100	85.194	Pelodiscus_sinensis
ENSMICG00000041489	-	100	70.714	ENSPMGG00000007980	rbm17	100	70.714	Periophthalmus_magnuspinnatus
ENSMICG00000041489	-	100	90.954	ENSPEMG00000014320	Rbm17	100	90.954	Peromyscus_maniculatus_bairdii
ENSMICG00000041489	-	100	88.564	ENSPCIG00000019260	-	100	88.564	Phascolarctos_cinereus
ENSMICG00000041489	-	100	73.647	ENSPFOG00000013271	rbm17	100	73.647	Poecilia_formosa
ENSMICG00000041489	-	100	73.882	ENSPLAG00000004455	rbm17	100	73.882	Poecilia_latipinna
ENSMICG00000041489	-	100	75.604	ENSPMEG00000014864	rbm17	100	75.604	Poecilia_mexicana
ENSMICG00000041489	-	100	73.176	ENSPREG00000015589	rbm17	100	73.176	Poecilia_reticulata
ENSMICG00000041489	-	99	65.111	ENSPPYG00000019881	-	100	64.865	Pongo_abelii
ENSMICG00000041489	-	81	63.142	ENSPPYG00000019042	-	100	62.840	Pongo_abelii
ENSMICG00000041489	-	100	90.220	ENSPPYG00000002067	RBM17	100	90.220	Pongo_abelii
ENSMICG00000041489	-	100	82.152	ENSPCAG00000016879	RBM17	100	82.152	Procavia_capensis
ENSMICG00000041489	-	100	90.954	ENSPCOG00000027881	RBM17	100	90.954	Propithecus_coquereli
ENSMICG00000041489	-	100	80.685	ENSPVAG00000015499	RBM17	100	79.218	Pteropus_vampyrus
ENSMICG00000041489	-	100	69.682	ENSPNYG00000015274	rbm17	100	69.682	Pundamilia_nyererei
ENSMICG00000041489	-	100	71.596	ENSPNAG00000030046	rbm17	100	74.178	Pygocentrus_nattereri
ENSMICG00000041489	-	100	90.954	ENSRNOG00000018767	Rbm17	100	90.954	Rattus_norvegicus
ENSMICG00000041489	-	100	90.220	ENSRBIG00000043727	RBM17	100	90.220	Rhinopithecus_bieti
ENSMICG00000041489	-	100	90.220	ENSRROG00000044142	RBM17	100	90.220	Rhinopithecus_roxellana
ENSMICG00000041489	-	100	80.732	ENSSBOG00000023653	-	100	80.685	Saimiri_boliviensis_boliviensis
ENSMICG00000041489	-	100	90.220	ENSSBOG00000031661	-	100	90.220	Saimiri_boliviensis_boliviensis
ENSMICG00000041489	-	100	89.242	ENSSHAG00000012480	-	100	89.242	Sarcophilus_harrisii
ENSMICG00000041489	-	100	75.845	ENSSFOG00015009892	rbm17	100	75.845	Scleropages_formosus
ENSMICG00000041489	-	100	72.506	ENSSMAG00000012368	rbm17	100	72.082	Scophthalmus_maximus
ENSMICG00000041489	-	100	75.476	ENSSDUG00000015015	rbm17	100	75.476	Seriola_dumerili
ENSMICG00000041489	-	100	75.476	ENSSLDG00000014486	rbm17	100	75.476	Seriola_lalandi_dorsalis
ENSMICG00000041489	-	59	71.074	ENSSARG00000001792	-	99	71.074	Sorex_araneus
ENSMICG00000041489	-	99	86.765	ENSSPUG00000001036	RBM17	99	86.765	Sphenodon_punctatus
ENSMICG00000041489	-	100	76.087	ENSSPAG00000002338	rbm17	100	76.087	Stegastes_partitus
ENSMICG00000041489	-	100	89.976	ENSSSCG00000011134	RBM17	100	89.976	Sus_scrofa
ENSMICG00000041489	-	100	86.553	ENSTGUG00000002013	RBM17	100	86.553	Taeniopygia_guttata
ENSMICG00000041489	-	100	76.329	ENSTRUG00000010698	rbm17	100	76.329	Takifugu_rubripes
ENSMICG00000041489	-	100	77.053	ENSTNIG00000006892	rbm17	100	77.053	Tetraodon_nigroviridis
ENSMICG00000041489	-	100	71.149	ENSTBEG00000014686	RBM17	100	71.149	Tupaia_belangeri
ENSMICG00000041489	-	90	89.402	ENSTTRG00000001344	RBM17	100	89.402	Tursiops_truncatus
ENSMICG00000041489	-	100	86.553	ENSUAMG00000009499	RBM17	100	86.553	Ursus_americanus
ENSMICG00000041489	-	100	89.976	ENSUMAG00000012237	RBM17	100	89.976	Ursus_maritimus
ENSMICG00000041489	-	100	76.284	ENSVPAG00000005497	RBM17	100	76.284	Vicugna_pacos
ENSMICG00000041489	-	100	86.308	ENSVVUG00000006780	RBM17	97	90.113	Vulpes_vulpes
ENSMICG00000041489	-	99	78.986	ENSXETG00000018123	rbm17	100	78.986	Xenopus_tropicalis
ENSMICG00000041489	-	100	75.121	ENSXMAG00000008674	rbm17	100	75.121	Xiphophorus_maculatus