EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000041608 (Gene tree)
Gene ID: 105859435
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 23351 bases
Position: chr16:30707548-30730898
Accession: 105859435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000029508	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000033165	RAB5C-201	1690	XM_012743242	ENSMICP00000029508	216 (aa)	XP_012598696	UPI000643CFE6

Gene Model

Click here to download ENSMICG00000041608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000041608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000041608	RAB5C	89	37.949	ENSMICG00000047356	RAB35	95	39.583
ENSMICG00000041608	RAB5C	75	42.236	ENSMICG00000010340	-	80	42.236
ENSMICG00000041608	RAB5C	83	39.459	ENSMICG00000012002	RAB30	91	39.459
ENSMICG00000041608	RAB5C	88	37.811	ENSMICG00000030661	RAB12	92	34.081
ENSMICG00000041608	RAB5C	89	34.848	ENSMICG00000003057	RAB9B	97	34.848
ENSMICG00000041608	RAB5C	76	42.683	ENSMICG00000003350	RAB14	81	40.741
ENSMICG00000041608	RAB5C	94	41.379	ENSMICG00000049590	RAB6B	98	41.379
ENSMICG00000041608	RAB5C	73	36.250	ENSMICG00000015683	RAB36	51	36.250
ENSMICG00000041608	RAB5C	73	43.210	ENSMICG00000038752	-	81	43.210
ENSMICG00000041608	RAB5C	75	40.361	ENSMICG00000034851	RAB33A	70	40.361
ENSMICG00000041608	RAB5C	89	43.590	ENSMICG00000012587	RAB1A	95	43.590
ENSMICG00000041608	RAB5C	91	32.353	ENSMICG00000029915	-	79	35.465
ENSMICG00000041608	RAB5C	93	37.681	ENSMICG00000034809	-	89	37.681
ENSMICG00000041608	RAB5C	90	42.512	ENSMICG00000034065	-	94	42.512
ENSMICG00000041608	RAB5C	89	34.343	ENSMICG00000041433	-	97	34.343
ENSMICG00000041608	RAB5C	97	85.646	ENSMICG00000011086	RAB5B	97	85.646
ENSMICG00000041608	RAB5C	90	48.454	ENSMICG00000008382	-	98	48.454
ENSMICG00000041608	RAB5C	85	41.799	ENSMICG00000017280	RAB18	94	40.299
ENSMICG00000041608	RAB5C	77	33.333	ENSMICG00000006266	RERG	84	33.333
ENSMICG00000041608	RAB5C	71	35.948	ENSMICG00000031301	-	65	35.948
ENSMICG00000041608	RAB5C	73	31.875	ENSMICG00000016913	RAB34	62	31.875
ENSMICG00000041608	RAB5C	67	34.483	ENSMICG00000033790	RHEB	91	34.483
ENSMICG00000041608	RAB5C	89	44.845	ENSMICG00000029171	RAB1B	96	44.845
ENSMICG00000041608	RAB5C	78	31.953	ENSMICG00000001474	CASC1	85	32.515
ENSMICG00000041608	RAB5C	71	34.375	ENSMICG00000014668	REM1	59	32.961
ENSMICG00000041608	RAB5C	90	41.748	ENSMICG00000041504	RAB11A	94	41.748
ENSMICG00000041608	RAB5C	81	36.571	ENSMICG00000014037	RAB23	73	36.571
ENSMICG00000041608	RAB5C	75	44.099	ENSMICG00000034540	RAB2A	76	44.099
ENSMICG00000041608	RAB5C	100	87.500	ENSMICG00000049130	RAB5A	100	87.500
ENSMICG00000041608	RAB5C	81	37.143	ENSMICG00000013101	RAB15	95	35.149
ENSMICG00000041608	RAB5C	55	31.148	ENSMICG00000038748	ARL8A	62	31.148
ENSMICG00000041608	RAB5C	81	34.254	ENSMICG00000006472	HRAS	94	34.254
ENSMICG00000041608	RAB5C	91	45.918	ENSMICG00000002882	RAB31	98	45.918
ENSMICG00000041608	RAB5C	75	37.195	ENSMICG00000044410	RAB39B	77	37.195
ENSMICG00000041608	RAB5C	81	31.638	ENSMICG00000036237	-	97	31.638
ENSMICG00000041608	RAB5C	55	31.967	ENSMICG00000029477	-	62	31.967
ENSMICG00000041608	RAB5C	78	31.667	ENSMICG00000000653	-	78	31.667
ENSMICG00000041608	RAB5C	89	40.796	ENSMICG00000002230	RAB25	93	40.796
ENSMICG00000041608	RAB5C	94	39.806	ENSMICG00000031565	RAB6A	98	39.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000041608	RAB5C	100	99.074	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSMICG00000041608	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.628	Acanthochromis_polyacanthus
ENSMICG00000041608	RAB5C	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSMICG00000041608	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSMICG00000041608	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.667	Amphiprion_ocellaris
ENSMICG00000041608	RAB5C	97	89.100	ENSAPEG00000017868	-	97	91.469	Amphiprion_percula
ENSMICG00000041608	RAB5C	100	89.908	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSMICG00000041608	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSMICG00000041608	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.741	Astatotilapia_calliptera
ENSMICG00000041608	RAB5C	96	89.573	ENSACLG00000008615	-	99	89.041	Astatotilapia_calliptera
ENSMICG00000041608	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSMICG00000041608	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSMICG00000041608	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSMICG00000041608	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSMICG00000041608	RAB5C	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSMICG00000041608	RAB5C	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSMICG00000041608	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSMICG00000041608	RAB5C	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSMICG00000041608	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSMICG00000041608	RAB5C	100	99.074	ENSCATG00000040873	RAB5C	100	99.074	Cercocebus_atys
ENSMICG00000041608	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSMICG00000041608	RAB5C	82	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSMICG00000041608	RAB5C	99	76.636	ENSCING00000003340	-	99	76.636	Ciona_intestinalis
ENSMICG00000041608	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSMICG00000041608	RAB5C	100	98.148	ENSCGRG00001014226	Rab5c	100	98.148	Cricetulus_griseus_chok1gshd
ENSMICG00000041608	RAB5C	100	98.148	ENSCGRG00000007534	Rab5c	100	98.148	Cricetulus_griseus_crigri
ENSMICG00000041608	RAB5C	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSMICG00000041608	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSMICG00000041608	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSMICG00000041608	RAB5C	100	99.074	ENSDORG00000006819	Rab5c	100	99.074	Dipodomys_ordii
ENSMICG00000041608	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSMICG00000041608	RAB5C	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSMICG00000041608	RAB5C	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSMICG00000041608	RAB5C	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSMICG00000041608	RAB5C	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSMICG00000041608	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSMICG00000041608	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSMICG00000041608	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSMICG00000041608	RAB5C	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSMICG00000041608	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSMICG00000041608	RAB5C	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSMICG00000041608	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.741	Gadus_morhua
ENSMICG00000041608	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSMICG00000041608	RAB5C	99	89.352	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSMICG00000041608	RAB5C	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSMICG00000041608	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSMICG00000041608	RAB5C	100	99.074	ENSGGOG00000005472	RAB5C	100	99.074	Gorilla_gorilla
ENSMICG00000041608	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.741	Haplochromis_burtoni
ENSMICG00000041608	RAB5C	96	89.573	ENSHBUG00000006823	-	99	89.041	Haplochromis_burtoni
ENSMICG00000041608	RAB5C	100	95.370	ENSHGLG00000012067	RAB5C	100	95.370	Heterocephalus_glaber_female
ENSMICG00000041608	RAB5C	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSMICG00000041608	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSMICG00000041608	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSMICG00000041608	RAB5C	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSMICG00000041608	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSMICG00000041608	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSMICG00000041608	RAB5C	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSMICG00000041608	RAB5C	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSMICG00000041608	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSMICG00000041608	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSMICG00000041608	RAB5C	100	99.074	ENSMFAG00000039627	RAB5C	100	99.074	Macaca_fascicularis
ENSMICG00000041608	RAB5C	100	99.074	ENSMNEG00000000355	RAB5C	100	99.074	Macaca_nemestrina
ENSMICG00000041608	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSMICG00000041608	RAB5C	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSMICG00000041608	RAB5C	96	89.573	ENSMZEG00005021090	-	99	89.041	Maylandia_zebra
ENSMICG00000041608	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.741	Maylandia_zebra
ENSMICG00000041608	RAB5C	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSMICG00000041608	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSMICG00000041608	RAB5C	100	89.908	ENSMMOG00000020621	rab5c	99	89.908	Mola_mola
ENSMICG00000041608	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSMICG00000041608	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSMICG00000041608	RAB5C	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSMICG00000041608	RAB5C	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSMICG00000041608	RAB5C	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSMICG00000041608	RAB5C	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSMICG00000041608	RAB5C	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSMICG00000041608	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSMICG00000041608	RAB5C	96	89.573	ENSNBRG00000016922	-	99	89.041	Neolamprologus_brichardi
ENSMICG00000041608	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.667	Neolamprologus_brichardi
ENSMICG00000041608	RAB5C	82	92.135	ENSOPRG00000008255	RAB5C	100	92.135	Ochotona_princeps
ENSMICG00000041608	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSMICG00000041608	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.667	Oreochromis_niloticus
ENSMICG00000041608	RAB5C	100	88.532	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSMICG00000041608	RAB5C	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSMICG00000041608	RAB5C	100	88.532	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSMICG00000041608	RAB5C	100	88.532	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSMICG00000041608	RAB5C	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSMICG00000041608	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSMICG00000041608	RAB5C	100	99.074	ENSPPAG00000037206	RAB5C	100	99.074	Pan_paniscus
ENSMICG00000041608	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSMICG00000041608	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSMICG00000041608	RAB5C	100	99.074	ENSPTRG00000009194	RAB5C	100	99.074	Pan_troglodytes
ENSMICG00000041608	RAB5C	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSMICG00000041608	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSMICG00000041608	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSMICG00000041608	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSMICG00000041608	RAB5C	99	78.505	ENSPMAG00000007867	rab5c	99	78.505	Petromyzon_marinus
ENSMICG00000041608	RAB5C	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSMICG00000041608	RAB5C	99	78.378	ENSPMAG00000000008	rab5c	100	78.378	Petromyzon_marinus
ENSMICG00000041608	RAB5C	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSMICG00000041608	RAB5C	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSMICG00000041608	RAB5C	99	89.352	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSMICG00000041608	RAB5C	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSMICG00000041608	RAB5C	99	89.352	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSMICG00000041608	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSMICG00000041608	RAB5C	99	89.352	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSMICG00000041608	RAB5C	100	99.074	ENSPPYG00000008398	RAB5C	100	99.074	Pongo_abelii
ENSMICG00000041608	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSMICG00000041608	RAB5C	100	99.074	ENSPCOG00000026327	RAB5C	100	99.074	Propithecus_coquereli
ENSMICG00000041608	RAB5C	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSMICG00000041608	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.741	Pundamilia_nyererei
ENSMICG00000041608	RAB5C	96	89.573	ENSPNYG00000015851	-	99	89.041	Pundamilia_nyererei
ENSMICG00000041608	RAB5C	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSMICG00000041608	RAB5C	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSMICG00000041608	RAB5C	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSMICG00000041608	RAB5C	100	99.074	ENSRBIG00000031376	RAB5C	100	99.074	Rhinopithecus_bieti
ENSMICG00000041608	RAB5C	100	99.074	ENSRROG00000032895	RAB5C	100	99.074	Rhinopithecus_roxellana
ENSMICG00000041608	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSMICG00000041608	RAB5C	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSMICG00000041608	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSMICG00000041608	RAB5C	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSMICG00000041608	RAB5C	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSMICG00000041608	RAB5C	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSMICG00000041608	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSMICG00000041608	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.593	Stegastes_partitus
ENSMICG00000041608	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSMICG00000041608	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSMICG00000041608	RAB5C	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSMICG00000041608	RAB5C	100	99.074	ENSTBEG00000007092	RAB5C	100	99.074	Tupaia_belangeri
ENSMICG00000041608	RAB5C	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSMICG00000041608	RAB5C	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSMICG00000041608	RAB5C	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSMICG00000041608	RAB5C	99	88.889	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSMICG00000041608	RAB5C	96	91.905	ENSXCOG00000006300	-	99	89.091	Xiphophorus_couchianus
ENSMICG00000041608	RAB5C	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus
ENSMICG00000041608	RAB5C	99	89.352	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus