EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000041706 (Gene tree)
Gene ID: 105879633
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrX:20756626-20757774
Accession: 105879633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000049705	RRM_5	PF13893.6	7.1e-12	1	2
ENSMICP00000049705	RRM_5	PF13893.6	7.1e-12	2	2
ENSMICP00000049705	RRM_1	PF00076.22	7.8e-79	1	4
ENSMICP00000049705	RRM_1	PF00076.22	7.8e-79	2	4
ENSMICP00000049705	RRM_1	PF00076.22	7.8e-79	3	4
ENSMICP00000049705	RRM_1	PF00076.22	7.8e-79	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000070979	PABPC5-201	1149	-	ENSMICP00000049705	382 (aa)	XP_012635460	UPI00064301B7

Gene Model

Click here to download ENSMICG00000041706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000041706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000041706	PABPC5	98	64.960	ENSMICG00000009121	PABPC1	69	65.642
ENSMICG00000041706	PABPC5	93	60.204	ENSMICG00000047642	-	98	59.896
ENSMICG00000041706	PABPC5	94	61.130	ENSMICG00000036729	-	58	61.130
ENSMICG00000041706	PABPC5	96	67.123	ENSMICG00000016633	-	68	67.318
ENSMICG00000041706	PABPC5	94	37.037	ENSMICG00000001558	ELAVL2	87	37.037
ENSMICG00000041706	PABPC5	94	30.576	ENSMICG00000009699	ELAVL1	92	30.769
ENSMICG00000041706	PABPC5	83	31.737	ENSMICG00000000232	NONO	56	30.928
ENSMICG00000041706	PABPC5	62	36.709	ENSMICG00000010644	CELF3	72	34.524
ENSMICG00000041706	PABPC5	96	62.637	ENSMICG00000029683	PABPC4L	98	62.640
ENSMICG00000041706	PABPC5	69	36.709	ENSMICG00000027918	-	52	36.709
ENSMICG00000041706	PABPC5	97	64.690	ENSMICG00000011830	PABPC3	59	65.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000041706	PABPC5	99	96.588	ENSG00000174740	PABPC5	99	96.588	Homo_sapiens
ENSMICG00000041706	PABPC5	99	96.325	ENSAMEG00000020114	PABPC5	100	96.325	Ailuropoda_melanoleuca
ENSMICG00000041706	PABPC5	99	96.588	ENSANAG00000005063	PABPC5	99	96.588	Aotus_nancymaae
ENSMICG00000041706	PABPC5	100	95.550	ENSBTAG00000019942	PABPC5	100	95.550	Bos_taurus
ENSMICG00000041706	PABPC5	99	96.063	ENSCJAG00000003665	PABPC5	99	96.063	Callithrix_jacchus
ENSMICG00000041706	PABPC5	100	95.812	ENSCAFG00000017452	PABPC5	100	95.812	Canis_familiaris
ENSMICG00000041706	PABPC5	100	95.550	ENSCHIG00000019004	PABPC5	100	95.550	Capra_hircus
ENSMICG00000041706	PABPC5	100	96.073	ENSTSYG00000036351	PABPC5	100	96.073	Carlito_syrichta
ENSMICG00000041706	PABPC5	99	86.911	ENSCAPG00000010714	PABPC5	100	86.911	Cavia_aperea
ENSMICG00000041706	PABPC5	100	93.455	ENSCPOG00000002555	PABPC5	100	93.455	Cavia_porcellus
ENSMICG00000041706	PABPC5	99	96.588	ENSCCAG00000032154	PABPC5	99	96.588	Cebus_capucinus
ENSMICG00000041706	PABPC5	99	96.325	ENSCATG00000043083	PABPC5	99	96.325	Cercocebus_atys
ENSMICG00000041706	PABPC5	100	94.241	ENSCLAG00000000647	PABPC5	100	94.241	Chinchilla_lanigera
ENSMICG00000041706	PABPC5	99	96.325	ENSCSAG00000000065	PABPC5	99	96.325	Chlorocebus_sabaeus
ENSMICG00000041706	PABPC5	99	96.325	ENSCANG00000011473	PABPC5	99	96.325	Colobus_angolensis_palliatus
ENSMICG00000041706	PABPC5	100	93.455	ENSCGRG00000018699	Pabpc5	100	93.455	Cricetulus_griseus_crigri
ENSMICG00000041706	PABPC5	100	77.285	ENSETEG00000011832	PABPC5	100	77.285	Echinops_telfairi
ENSMICG00000041706	PABPC5	100	96.335	ENSEASG00005014396	PABPC5	100	96.335	Equus_asinus_asinus
ENSMICG00000041706	PABPC5	100	96.335	ENSECAG00000003452	PABPC5	100	96.335	Equus_caballus
ENSMICG00000041706	PABPC5	100	96.073	ENSFCAG00000004998	PABPC5	100	96.073	Felis_catus
ENSMICG00000041706	PABPC5	100	95.026	ENSFDAG00000000126	PABPC5	100	95.026	Fukomys_damarensis
ENSMICG00000041706	PABPC5	99	96.588	ENSGGOG00000007622	PABPC5	99	96.588	Gorilla_gorilla
ENSMICG00000041706	PABPC5	95	94.954	ENSJJAG00000011960	Pabpc5	100	94.954	Jaculus_jaculus
ENSMICG00000041706	PABPC5	99	96.325	ENSMFAG00000024561	PABPC5	99	96.325	Macaca_fascicularis
ENSMICG00000041706	PABPC5	99	96.325	ENSMMUG00000011562	PABPC5	99	96.325	Macaca_mulatta
ENSMICG00000041706	PABPC5	99	96.325	ENSMNEG00000037604	PABPC5	99	96.325	Macaca_nemestrina
ENSMICG00000041706	PABPC5	99	96.325	ENSMLEG00000028318	PABPC5	99	96.325	Mandrillus_leucophaeus
ENSMICG00000041706	PABPC5	100	94.241	ENSMOCG00000001554	Pabpc5	100	94.241	Microtus_ochrogaster
ENSMICG00000041706	PABPC5	99	93.421	MGP_CAROLIEiJ_G0033367	Pabpc5	99	93.421	Mus_caroli
ENSMICG00000041706	PABPC5	99	93.947	ENSMUSG00000034732	Pabpc5	99	93.947	Mus_musculus
ENSMICG00000041706	PABPC5	100	94.241	MGP_PahariEiJ_G0031908	Pabpc5	100	94.241	Mus_pahari
ENSMICG00000041706	PABPC5	99	93.947	MGP_SPRETEiJ_G0034533	Pabpc5	99	93.947	Mus_spretus
ENSMICG00000041706	PABPC5	100	95.288	ENSMPUG00000018465	PABPC5	100	95.288	Mustela_putorius_furo
ENSMICG00000041706	PABPC5	100	94.503	ENSMLUG00000008244	PABPC5	100	94.503	Myotis_lucifugus
ENSMICG00000041706	PABPC5	95	94.037	ENSNGAG00000004371	Pabpc5	100	94.037	Nannospalax_galili
ENSMICG00000041706	PABPC5	99	96.588	ENSNLEG00000035086	PABPC5	99	96.588	Nomascus_leucogenys
ENSMICG00000041706	PABPC5	98	97.738	ENSOPRG00000000856	PABPC5	100	97.738	Ochotona_princeps
ENSMICG00000041706	PABPC5	100	96.335	ENSOCUG00000010919	PABPC5	100	96.335	Oryctolagus_cuniculus
ENSMICG00000041706	PABPC5	100	95.812	ENSOGAG00000006882	PABPC5	100	95.812	Otolemur_garnettii
ENSMICG00000041706	PABPC5	100	95.812	ENSOARG00000010260	PABPC5	100	95.812	Ovis_aries
ENSMICG00000041706	PABPC5	99	96.588	ENSPPAG00000007378	PABPC5	99	96.588	Pan_paniscus
ENSMICG00000041706	PABPC5	100	96.073	ENSPPRG00000010742	PABPC5	100	96.073	Panthera_pardus
ENSMICG00000041706	PABPC5	100	96.073	ENSPTIG00000001480	PABPC5	100	96.073	Panthera_tigris_altaica
ENSMICG00000041706	PABPC5	99	96.588	ENSPTRG00000022078	PABPC5	99	96.588	Pan_troglodytes
ENSMICG00000041706	PABPC5	99	96.325	ENSPANG00000018282	PABPC5	99	96.325	Papio_anubis
ENSMICG00000041706	PABPC5	100	93.979	ENSPEMG00000000171	Pabpc5	100	93.979	Peromyscus_maniculatus_bairdii
ENSMICG00000041706	PABPC5	99	96.588	ENSPPYG00000020526	PABPC5	99	96.588	Pongo_abelii
ENSMICG00000041706	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSMICG00000041706	PABPC5	100	98.168	ENSPCOG00000000676	PABPC5	100	98.168	Propithecus_coquereli
ENSMICG00000041706	PABPC5	100	96.335	ENSPVAG00000006465	PABPC5	100	96.335	Pteropus_vampyrus
ENSMICG00000041706	PABPC5	100	93.979	ENSRNOG00000003354	Pabpc5	100	93.979	Rattus_norvegicus
ENSMICG00000041706	PABPC5	99	96.325	ENSRBIG00000011760	PABPC5	99	96.325	Rhinopithecus_bieti
ENSMICG00000041706	PABPC5	99	96.325	ENSRROG00000036708	PABPC5	99	96.325	Rhinopithecus_roxellana
ENSMICG00000041706	PABPC5	99	96.325	ENSSBOG00000008658	PABPC5	99	96.325	Saimiri_boliviensis_boliviensis
ENSMICG00000041706	PABPC5	100	93.979	ENSSARG00000014012	PABPC5	100	93.979	Sorex_araneus
ENSMICG00000041706	PABPC5	100	95.550	ENSSSCG00000040194	PABPC5	100	95.550	Sus_scrofa
ENSMICG00000041706	PABPC5	100	96.859	ENSTBEG00000016482	PABPC5	100	96.859	Tupaia_belangeri
ENSMICG00000041706	PABPC5	100	96.073	ENSUAMG00000013627	PABPC5	100	96.073	Ursus_americanus
ENSMICG00000041706	PABPC5	100	95.812	ENSUMAG00000023934	PABPC5	100	95.812	Ursus_maritimus
ENSMICG00000041706	PABPC5	100	95.812	ENSVPAG00000001063	PABPC5	100	95.812	Vicugna_pacos
ENSMICG00000041706	PABPC5	100	96.073	ENSVVUG00000013172	PABPC5	100	96.073	Vulpes_vulpes