EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000042330 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 7052 bases
Position: chr25:21111180-21118231
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000043988	KH_1	PF00013.29	2.4e-17	1	2
ENSMICP00000043988	KH_1	PF00013.29	2.4e-17	2	2
ENSMICP00000043402	KH_1	PF00013.29	2.4e-17	1	2
ENSMICP00000043402	KH_1	PF00013.29	2.4e-17	2	2
ENSMICP00000049443	KH_1	PF00013.29	2.5e-17	1	2
ENSMICP00000049443	KH_1	PF00013.29	2.5e-17	2	2
ENSMICP00000044595	KH_1	PF00013.29	2.5e-17	1	2
ENSMICP00000044595	KH_1	PF00013.29	2.5e-17	2	2
ENSMICP00000047047	KH_1	PF00013.29	3.6e-17	1	2
ENSMICP00000047047	KH_1	PF00013.29	3.6e-17	2	2
ENSMICP00000042571	KH_1	PF00013.29	1.3e-08	1	1
ENSMICP00000047047	TUDOR	PF00567.24	3.9e-07	1	1
ENSMICP00000043988	TUDOR	PF00567.24	4.2e-07	1	1
ENSMICP00000043402	TUDOR	PF00567.24	4.3e-07	1	1
ENSMICP00000049443	TUDOR	PF00567.24	4.4e-07	1	1
ENSMICP00000044595	TUDOR	PF00567.24	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000070937	-	378	-	ENSMICP00000042571	125 (aa)	-	UPI000C2ECFC0
ENSMICT00000058285	-	1395	-	ENSMICP00000047047	464 (aa)	-	UPI000C2EBFA2
ENSMICT00000065611	-	1521	-	ENSMICP00000044595	506 (aa)	-	UPI000C2EB0A3
ENSMICT00000060113	-	1500	-	ENSMICP00000043402	499 (aa)	-	UPI000C2EBC5F
ENSMICT00000071050	-	1485	-	ENSMICP00000043988	494 (aa)	-	UPI000C2ECFEC
ENSMICT00000064201	-	1512	-	ENSMICP00000049443	503 (aa)	-	UPI000C2EC39D

Gene Model

Click here to download ENSMICG00000042330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000042330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000042330	-	100	76.114	ENSMICG00000010682	-	100	76.114

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000042330	-	100	75.714	ENSG00000182134	TDRKH	100	79.389	Homo_sapiens
ENSMICG00000042330	-	100	69.681	ENSAMEG00000000421	TDRKH	100	70.567	Ailuropoda_melanoleuca
ENSMICG00000042330	-	89	47.771	ENSACAG00000007457	TDRKH	93	47.771	Anolis_carolinensis
ENSMICG00000042330	-	100	71.836	ENSANAG00000021663	TDRKH	100	71.836	Aotus_nancymaae
ENSMICG00000042330	-	100	71.301	ENSBTAG00000021594	TDRKH	100	71.301	Bos_taurus
ENSMICG00000042330	-	100	72.014	ENSCJAG00000007955	TDRKH	100	72.014	Callithrix_jacchus
ENSMICG00000042330	-	100	72.518	ENSCAFG00000012856	TDRKH	100	72.518	Canis_familiaris
ENSMICG00000042330	-	100	72.518	ENSCAFG00020009606	TDRKH	100	72.518	Canis_lupus_dingo
ENSMICG00000042330	-	100	70.945	ENSCHIG00000025326	TDRKH	100	70.945	Capra_hircus
ENSMICG00000042330	-	100	71.301	ENSTSYG00000010405	TDRKH	100	71.301	Carlito_syrichta
ENSMICG00000042330	-	96	69.091	ENSCAPG00000007565	TDRKH	97	68.379	Cavia_aperea
ENSMICG00000042330	-	100	70.714	ENSCPOG00000003556	TDRKH	100	70.714	Cavia_porcellus
ENSMICG00000042330	-	100	72.014	ENSCCAG00000033931	TDRKH	100	72.014	Cebus_capucinus
ENSMICG00000042330	-	100	72.906	ENSCATG00000041878	TDRKH	100	72.906	Cercocebus_atys
ENSMICG00000042330	-	100	68.806	ENSCLAG00000001088	TDRKH	100	68.806	Chinchilla_lanigera
ENSMICG00000042330	-	100	72.727	ENSCSAG00000001820	TDRKH	100	72.727	Chlorocebus_sabaeus
ENSMICG00000042330	-	81	85.714	ENSCHOG00000000264	TDRKH	85	85.714	Choloepus_hoffmanni
ENSMICG00000042330	-	94	54.694	ENSCPBG00000008824	TDRKH	89	51.487	Chrysemys_picta_bellii
ENSMICG00000042330	-	100	72.193	ENSCANG00000037367	TDRKH	100	72.193	Colobus_angolensis_palliatus
ENSMICG00000042330	-	97	56.455	ENSCGRG00001011699	-	99	56.923	Cricetulus_griseus_chok1gshd
ENSMICG00000042330	-	77	37.226	ENSCGRG00001010793	-	89	48.736	Cricetulus_griseus_chok1gshd
ENSMICG00000042330	-	99	71.505	ENSCGRG00001006583	-	100	71.505	Cricetulus_griseus_chok1gshd
ENSMICG00000042330	-	77	36.496	ENSCGRG00000012138	-	89	48.375	Cricetulus_griseus_crigri
ENSMICG00000042330	-	97	56.455	ENSCGRG00000013230	-	99	56.923	Cricetulus_griseus_crigri
ENSMICG00000042330	-	99	71.505	ENSCGRG00000012937	-	100	71.505	Cricetulus_griseus_crigri
ENSMICG00000042330	-	96	69.643	ENSDNOG00000035650	TDRKH	99	69.155	Dasypus_novemcinctus
ENSMICG00000042330	-	100	71.480	ENSDORG00000015322	Tdrkh	100	71.480	Dipodomys_ordii
ENSMICG00000042330	-	100	64.121	ENSETEG00000008020	TDRKH	100	64.121	Echinops_telfairi
ENSMICG00000042330	-	92	32.520	ENSEBUG00000010481	TDRKH	84	31.590	Eptatretus_burgeri
ENSMICG00000042330	-	100	71.658	ENSEASG00005005213	TDRKH	100	71.658	Equus_asinus_asinus
ENSMICG00000042330	-	100	71.836	ENSECAG00000013096	TDRKH	100	71.836	Equus_caballus
ENSMICG00000042330	-	74	86.179	ENSEEUG00000015952	TDRKH	68	86.179	Erinaceus_europaeus
ENSMICG00000042330	-	100	71.936	ENSFCAG00000010980	TDRKH	100	71.936	Felis_catus
ENSMICG00000042330	-	100	69.697	ENSFDAG00000015315	TDRKH	100	69.697	Fukomys_damarensis
ENSMICG00000042330	-	96	46.707	ENSGALG00000031812	TDRKH	95	45.370	Gallus_gallus
ENSMICG00000042330	-	99	51.986	ENSGAGG00000005447	TDRKH	99	52.338	Gopherus_agassizii
ENSMICG00000042330	-	100	73.084	ENSGGOG00000025419	TDRKH	100	73.084	Gorilla_gorilla
ENSMICG00000042330	-	100	69.449	ENSHGLG00000007478	TDRKH	100	69.449	Heterocephalus_glaber_female
ENSMICG00000042330	-	100	69.449	ENSHGLG00100007927	TDRKH	100	69.449	Heterocephalus_glaber_male
ENSMICG00000042330	-	100	73.262	ENSSTOG00000006506	TDRKH	100	73.262	Ictidomys_tridecemlineatus
ENSMICG00000042330	-	100	70.018	ENSJJAG00000000323	Tdrkh	99	70.916	Jaculus_jaculus
ENSMICG00000042330	-	70	52.381	ENSLACG00000017639	TDRKH	96	42.928	Latimeria_chalumnae
ENSMICG00000042330	-	99	68.784	ENSLAFG00000006274	TDRKH	100	68.336	Loxodonta_africana
ENSMICG00000042330	-	100	72.906	ENSMFAG00000041641	TDRKH	100	72.906	Macaca_fascicularis
ENSMICG00000042330	-	98	72.595	ENSMMUG00000009096	TDRKH	99	72.320	Macaca_mulatta
ENSMICG00000042330	-	100	72.906	ENSMNEG00000021524	TDRKH	100	72.906	Macaca_nemestrina
ENSMICG00000042330	-	100	73.084	ENSMLEG00000033882	TDRKH	100	73.084	Mandrillus_leucophaeus
ENSMICG00000042330	-	99	70.674	ENSMAUG00000019159	Tdrkh	99	70.377	Mesocricetus_auratus
ENSMICG00000042330	-	99	65.942	ENSMOCG00000002113	-	99	66.787	Microtus_ochrogaster
ENSMICG00000042330	-	96	55.470	ENSMOCG00000014074	-	97	55.470	Microtus_ochrogaster
ENSMICG00000042330	-	99	65.062	ENSMODG00000018906	TDRKH	96	64.851	Monodelphis_domestica
ENSMICG00000042330	-	99	72.283	MGP_CAROLIEiJ_G0025310	Tdrkh	100	71.964	Mus_caroli
ENSMICG00000042330	-	100	72.143	ENSMUSG00000041912	Tdrkh	100	72.143	Mus_musculus
ENSMICG00000042330	-	100	72.143	MGP_PahariEiJ_G0026753	Tdrkh	100	72.143	Mus_pahari
ENSMICG00000042330	-	99	72.101	MGP_SPRETEiJ_G0026252	Tdrkh	100	71.786	Mus_spretus
ENSMICG00000042330	-	96	71.881	ENSMPUG00000003558	TDRKH	100	71.226	Mustela_putorius_furo
ENSMICG00000042330	-	100	68.984	ENSMLUG00000002213	TDRKH	100	68.984	Myotis_lucifugus
ENSMICG00000042330	-	99	72.101	ENSNGAG00000017825	Tdrkh	100	71.964	Nannospalax_galili
ENSMICG00000042330	-	100	72.549	ENSNLEG00000010284	TDRKH	100	72.549	Nomascus_leucogenys
ENSMICG00000042330	-	85	80.000	ENSMEUG00000006144	TDRKH	86	80.000	Notamacropus_eugenii
ENSMICG00000042330	-	74	58.571	ENSOPRG00000016049	TDRKH	75	58.571	Ochotona_princeps
ENSMICG00000042330	-	100	67.914	ENSODEG00000001075	-	100	67.914	Octodon_degus
ENSMICG00000042330	-	100	69.162	ENSODEG00000009532	-	100	69.162	Octodon_degus
ENSMICG00000042330	-	100	64.029	ENSOCUG00000001387	TDRKH	100	64.029	Oryctolagus_cuniculus
ENSMICG00000042330	-	70	56.311	ENSOGAG00000030085	-	93	59.783	Otolemur_garnettii
ENSMICG00000042330	-	100	65.499	ENSOGAG00000001839	-	100	65.499	Otolemur_garnettii
ENSMICG00000042330	-	98	64.112	ENSOGAG00000032601	-	99	62.545	Otolemur_garnettii
ENSMICG00000042330	-	100	70.945	ENSOARG00000021052	TDRKH	100	70.945	Ovis_aries
ENSMICG00000042330	-	100	73.084	ENSPPAG00000028994	TDRKH	100	73.084	Pan_paniscus
ENSMICG00000042330	-	100	72.469	ENSPPRG00000001585	TDRKH	100	72.469	Panthera_pardus
ENSMICG00000042330	-	100	72.469	ENSPTIG00000019916	TDRKH	100	72.469	Panthera_tigris_altaica
ENSMICG00000042330	-	100	73.084	ENSPTRG00000001297	TDRKH	100	73.084	Pan_troglodytes
ENSMICG00000042330	-	100	72.727	ENSPANG00000001986	TDRKH	100	72.727	Papio_anubis
ENSMICG00000042330	-	95	51.904	ENSPSIG00000008541	TDRKH	98	51.167	Pelodiscus_sinensis
ENSMICG00000042330	-	99	73.188	ENSPEMG00000011171	Tdrkh	100	72.857	Peromyscus_maniculatus_bairdii
ENSMICG00000042330	-	99	66.014	ENSPCIG00000021201	TDRKH	99	65.439	Phascolarctos_cinereus
ENSMICG00000042330	-	100	73.084	ENSPPYG00000000855	TDRKH	100	73.084	Pongo_abelii
ENSMICG00000042330	-	100	74.153	ENSPCOG00000027505	TDRKH	100	74.153	Propithecus_coquereli
ENSMICG00000042330	-	100	67.914	ENSPVAG00000005234	TDRKH	100	67.914	Pteropus_vampyrus
ENSMICG00000042330	-	99	72.826	ENSRNOG00000020860	Tdrkh	100	72.500	Rattus_norvegicus
ENSMICG00000042330	-	100	72.906	ENSRBIG00000044860	TDRKH	100	72.906	Rhinopithecus_bieti
ENSMICG00000042330	-	100	72.906	ENSRROG00000036923	TDRKH	100	72.906	Rhinopithecus_roxellana
ENSMICG00000042330	-	100	56.396	ENSSBOG00000034454	TDRKH	100	56.577	Saimiri_boliviensis_boliviensis
ENSMICG00000042330	-	99	66.667	ENSSHAG00000015859	TDRKH	88	65.905	Sarcophilus_harrisii
ENSMICG00000042330	-	99	62.162	ENSSARG00000008525	TDRKH	100	62.162	Sorex_araneus
ENSMICG00000042330	-	94	52.016	ENSSPUG00000002369	TDRKH	92	52.314	Sphenodon_punctatus
ENSMICG00000042330	-	99	70.545	ENSSSCG00000027770	TDRKH	100	70.430	Sus_scrofa
ENSMICG00000042330	-	99	72.613	ENSTBEG00000011201	TDRKH	99	72.613	Tupaia_belangeri
ENSMICG00000042330	-	100	63.636	ENSTTRG00000003149	TDRKH	100	63.636	Tursiops_truncatus
ENSMICG00000042330	-	100	70.515	ENSUAMG00000019589	TDRKH	100	70.515	Ursus_americanus
ENSMICG00000042330	-	100	70.870	ENSUMAG00000001456	TDRKH	100	70.870	Ursus_maritimus
ENSMICG00000042330	-	100	71.480	ENSVPAG00000000666	TDRKH	100	71.480	Vicugna_pacos
ENSMICG00000042330	-	100	72.469	ENSVVUG00000013241	TDRKH	100	72.469	Vulpes_vulpes
ENSMICG00000042330	-	92	35.197	ENSXETG00000019909	tdrkh	90	34.252	Xenopus_tropicalis