EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000042615 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC105858492
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 38784 bases
Position: chr7:2872806-2911589
Accession: 105858492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000044232	APOBEC_N	PF08210.11	6.8e-48	1	1
ENSMICP00000044232	APOBEC_C	PF05240.14	1.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000058917	-	2595	XM_020287712	ENSMICP00000044232	205 (aa)	XP_020143301	UPI000C2EC31E

Gene Model

Click here to download ENSMICG00000042615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000042615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000042615	-	76	32.500	ENSMICG00000043645	APOBEC1	65	32.500
ENSMICG00000042615	-	84	40.761	ENSMICG00000047191	-	97	40.761
ENSMICG00000042615	-	84	40.000	ENSMICG00000043748	-	91	40.000
ENSMICG00000042615	-	90	40.212	ENSMICG00000011695	AICDA	91	40.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000042615	-	89	53.723	ENSG00000244509	APOBEC3C	99	53.723	Homo_sapiens
ENSMICG00000042615	-	89	52.128	ENSG00000243811	APOBEC3D	99	52.128	Homo_sapiens
ENSMICG00000042615	-	89	55.676	ENSG00000128394	APOBEC3F	99	55.676	Homo_sapiens
ENSMICG00000042615	-	91	52.356	ENSANAG00000030088	-	96	52.356	Aotus_nancymaae
ENSMICG00000042615	-	62	53.488	ENSCJAG00000015317	-	98	53.488	Callithrix_jacchus
ENSMICG00000042615	-	90	45.833	ENSCAFG00020002615	-	99	45.833	Canis_lupus_dingo
ENSMICG00000042615	-	86	51.366	ENSTSYG00000028254	-	99	51.366	Carlito_syrichta
ENSMICG00000042615	-	90	50.000	ENSTSYG00000034260	-	99	50.000	Carlito_syrichta
ENSMICG00000042615	-	86	46.961	ENSTSYG00000030036	-	99	46.961	Carlito_syrichta
ENSMICG00000042615	-	98	48.357	ENSCCAG00000030932	-	96	48.357	Cebus_capucinus
ENSMICG00000042615	-	89	53.723	ENSCATG00000043226	APOBEC3C	99	53.723	Cercocebus_atys
ENSMICG00000042615	-	89	55.102	ENSCATG00000033502	-	99	54.054	Cercocebus_atys
ENSMICG00000042615	-	89	54.255	ENSCSAG00000006402	APOBEC3C	99	54.255	Chlorocebus_sabaeus
ENSMICG00000042615	-	88	54.595	ENSCSAG00000006382	APOBEC3F	99	54.595	Chlorocebus_sabaeus
ENSMICG00000042615	-	88	55.676	ENSCANG00000032904	-	98	55.676	Colobus_angolensis_palliatus
ENSMICG00000042615	-	89	54.054	ENSCANG00000031957	-	99	54.054	Colobus_angolensis_palliatus
ENSMICG00000042615	-	89	55.851	ENSCANG00000039177	APOBEC3C	99	55.851	Colobus_angolensis_palliatus
ENSMICG00000042615	-	90	48.936	ENSCANG00000033269	-	98	52.542	Colobus_angolensis_palliatus
ENSMICG00000042615	-	87	37.158	ENSDNOG00000044642	-	98	37.158	Dasypus_novemcinctus
ENSMICG00000042615	-	89	41.624	ENSEASG00005018641	-	97	41.624	Equus_asinus_asinus
ENSMICG00000042615	-	96	42.077	ENSECAG00000006071	-	99	42.473	Equus_caballus
ENSMICG00000042615	-	89	52.128	ENSGGOG00000036587	-	99	52.128	Gorilla_gorilla
ENSMICG00000042615	-	89	56.216	ENSGGOG00000038678	APOBEC3F	99	56.216	Gorilla_gorilla
ENSMICG00000042615	-	100	43.333	ENSHGLG00000017315	-	91	41.827	Heterocephalus_glaber_female
ENSMICG00000042615	-	100	44.262	ENSHGLG00100003105	-	99	44.262	Heterocephalus_glaber_male
ENSMICG00000042615	-	89	53.723	ENSMFAG00000016792	APOBEC3C	99	53.723	Macaca_fascicularis
ENSMICG00000042615	-	91	52.880	ENSMFAG00000002331	-	99	52.880	Macaca_fascicularis
ENSMICG00000042615	-	89	53.514	ENSMFAG00000004037	APOBEC3F	99	53.514	Macaca_fascicularis
ENSMICG00000042615	-	90	52.973	ENSMMUG00000004017	APOBEC3F	99	54.595	Macaca_mulatta
ENSMICG00000042615	-	87	54.098	ENSMMUG00000004018	APOBEC3C	94	54.098	Macaca_mulatta
ENSMICG00000042615	-	89	55.319	ENSMNEG00000045196	APOBEC3C	99	55.319	Macaca_nemestrina
ENSMICG00000042615	-	89	55.039	ENSMNEG00000043316	APOBEC3D	99	52.880	Macaca_nemestrina
ENSMICG00000042615	-	89	53.514	ENSMLEG00000029642	APOBEC3F	99	53.514	Mandrillus_leucophaeus
ENSMICG00000042615	-	89	53.723	ENSMLEG00000036992	APOBEC3C	99	53.723	Mandrillus_leucophaeus
ENSMICG00000042615	-	88	43.979	ENSMLUG00000023676	-	99	43.979	Myotis_lucifugus
ENSMICG00000042615	-	89	47.000	ENSNLEG00000035811	-	99	47.000	Nomascus_leucogenys
ENSMICG00000042615	-	89	53.723	ENSNLEG00000028392	APOBEC3C	99	53.723	Nomascus_leucogenys
ENSMICG00000042615	-	89	51.075	ENSOGAG00000030300	-	97	51.075	Otolemur_garnettii
ENSMICG00000042615	-	88	55.495	ENSOGAG00000032498	-	99	55.495	Otolemur_garnettii
ENSMICG00000042615	-	88	50.562	ENSOGAG00000033404	-	95	50.562	Otolemur_garnettii
ENSMICG00000042615	-	89	53.723	ENSPPAG00000014118	APOBEC3C	99	53.723	Pan_paniscus
ENSMICG00000042615	-	89	53.191	ENSPPAG00000028218	-	99	53.191	Pan_paniscus
ENSMICG00000042615	-	89	48.936	ENSPPRG00000003726	-	98	48.936	Panthera_pardus
ENSMICG00000042615	-	89	56.216	ENSPTRG00000014385	APOBEC3C	99	56.216	Pan_troglodytes
ENSMICG00000042615	-	89	52.660	ENSPTRG00000041588	APOBEC3D	99	52.660	Pan_troglodytes
ENSMICG00000042615	-	89	55.319	ENSPANG00000010775	APOBEC3F	99	55.319	Papio_anubis
ENSMICG00000042615	-	89	53.191	ENSPPYG00000011832	APOBEC3C	99	53.191	Pongo_abelii
ENSMICG00000042615	-	60	60.484	ENSPCOG00000018072	-	94	60.484	Propithecus_coquereli
ENSMICG00000042615	-	63	71.318	ENSPCOG00000022067	-	98	71.318	Propithecus_coquereli
ENSMICG00000042615	-	60	43.200	ENSPVAG00000009461	-	51	43.200	Pteropus_vampyrus
ENSMICG00000042615	-	92	52.577	ENSRBIG00000042297	-	99	55.769	Rhinopithecus_bieti
ENSMICG00000042615	-	89	54.595	ENSRBIG00000030834	-	99	54.595	Rhinopithecus_bieti
ENSMICG00000042615	-	89	57.447	ENSRBIG00000030323	-	99	57.447	Rhinopithecus_bieti
ENSMICG00000042615	-	89	55.135	ENSRROG00000028557	-	99	55.135	Rhinopithecus_roxellana
ENSMICG00000042615	-	92	52.577	ENSRROG00000029996	-	99	52.577	Rhinopithecus_roxellana
ENSMICG00000042615	-	89	57.447	ENSRROG00000029045	APOBEC3C	99	57.447	Rhinopithecus_roxellana
ENSMICG00000042615	-	89	53.723	ENSSBOG00000032780	-	99	53.723	Saimiri_boliviensis_boliviensis
ENSMICG00000042615	-	83	46.243	ENSUAMG00000004433	-	97	46.243	Ursus_americanus
ENSMICG00000042615	-	87	45.856	ENSUMAG00000014441	-	85	45.856	Ursus_maritimus
ENSMICG00000042615	-	69	44.966	ENSVVUG00000014628	-	91	44.521	Vulpes_vulpes