EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000043190 (Gene tree)
Gene ID: 105854867
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 77373 bases
Position: chr3:115920691-115998063
Accession: 105854867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000047014	FDF	PF09532.10	9.4e-18	1	1
ENSMICP00000047014	LSM14	PF12701.7	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000058584	EDC3-201	3722	XM_012735490	ENSMICP00000047014	508 (aa)	XP_012590944	UPI000642C494

Gene Model

Click here to download ENSMICG00000043190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000043190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000043190	EDC3	100	97.047	ENSG00000179151	EDC3	100	98.148	Homo_sapiens
ENSMICG00000043190	EDC3	100	55.534	ENSAPOG00000008655	EDC3	100	55.534	Acanthochromis_polyacanthus
ENSMICG00000043190	EDC3	100	70.000	ENSAPOG00000010791	edc3	100	70.000	Acanthochromis_polyacanthus
ENSMICG00000043190	EDC3	100	95.866	ENSAMEG00000008963	EDC3	100	95.866	Ailuropoda_melanoleuca
ENSMICG00000043190	EDC3	99	60.234	ENSACIG00000005330	EDC3	99	60.234	Amphilophus_citrinellus
ENSMICG00000043190	EDC3	100	69.155	ENSACIG00000017751	edc3	100	69.155	Amphilophus_citrinellus
ENSMICG00000043190	EDC3	100	70.000	ENSAOCG00000005431	edc3	100	70.000	Amphiprion_ocellaris
ENSMICG00000043190	EDC3	100	58.027	ENSAOCG00000009103	-	100	58.140	Amphiprion_ocellaris
ENSMICG00000043190	EDC3	100	58.140	ENSAPEG00000007841	EDC3	100	58.140	Amphiprion_percula
ENSMICG00000043190	EDC3	100	70.000	ENSAPEG00000000968	edc3	100	70.000	Amphiprion_percula
ENSMICG00000043190	EDC3	100	70.138	ENSATEG00000015505	edc3	100	70.138	Anabas_testudineus
ENSMICG00000043190	EDC3	100	57.946	ENSATEG00000004205	-	100	57.946	Anabas_testudineus
ENSMICG00000043190	EDC3	90	87.692	ENSAPLG00000008957	EDC3	100	87.692	Anas_platyrhynchos
ENSMICG00000043190	EDC3	78	87.406	ENSACAG00000000460	-	100	87.406	Anolis_carolinensis
ENSMICG00000043190	EDC3	100	97.244	ENSANAG00000024078	EDC3	100	97.244	Aotus_nancymaae
ENSMICG00000043190	EDC3	99	59.180	ENSACLG00000018776	-	99	59.180	Astatotilapia_calliptera
ENSMICG00000043190	EDC3	100	67.976	ENSACLG00000007232	edc3	100	67.976	Astatotilapia_calliptera
ENSMICG00000043190	EDC3	100	71.289	ENSAMXG00000001589	edc3	100	71.289	Astyanax_mexicanus
ENSMICG00000043190	EDC3	100	96.457	ENSBTAG00000007308	EDC3	100	96.457	Bos_taurus
ENSMICG00000043190	EDC3	100	97.441	ENSCJAG00000017681	EDC3	100	97.441	Callithrix_jacchus
ENSMICG00000043190	EDC3	100	96.457	ENSCAFG00000017935	EDC3	100	96.457	Canis_familiaris
ENSMICG00000043190	EDC3	100	96.457	ENSCAFG00020003909	EDC3	100	96.457	Canis_lupus_dingo
ENSMICG00000043190	EDC3	100	96.260	ENSCHIG00000023658	EDC3	100	96.260	Capra_hircus
ENSMICG00000043190	EDC3	100	96.850	ENSTSYG00000004822	EDC3	100	96.850	Carlito_syrichta
ENSMICG00000043190	EDC3	100	94.685	ENSCPOG00000015595	EDC3	100	94.685	Cavia_porcellus
ENSMICG00000043190	EDC3	100	97.638	ENSCCAG00000021663	EDC3	100	97.638	Cebus_capucinus
ENSMICG00000043190	EDC3	100	97.244	ENSCATG00000037511	EDC3	100	97.244	Cercocebus_atys
ENSMICG00000043190	EDC3	100	94.882	ENSCLAG00000005700	EDC3	100	94.882	Chinchilla_lanigera
ENSMICG00000043190	EDC3	100	97.244	ENSCSAG00000014239	EDC3	100	97.244	Chlorocebus_sabaeus
ENSMICG00000043190	EDC3	100	89.370	ENSCPBG00000024239	EDC3	100	89.370	Chrysemys_picta_bellii
ENSMICG00000043190	EDC3	100	38.417	ENSCING00000022142	-	99	38.417	Ciona_intestinalis
ENSMICG00000043190	EDC3	100	97.244	ENSCANG00000028699	EDC3	100	97.244	Colobus_angolensis_palliatus
ENSMICG00000043190	EDC3	100	95.866	ENSCGRG00001013874	Edc3	100	95.866	Cricetulus_griseus_chok1gshd
ENSMICG00000043190	EDC3	100	95.866	ENSCGRG00000011885	Edc3	100	95.866	Cricetulus_griseus_crigri
ENSMICG00000043190	EDC3	99	69.488	ENSCSEG00000012996	edc3	99	69.488	Cynoglossus_semilaevis
ENSMICG00000043190	EDC3	100	68.959	ENSCVAG00000008023	edc3	100	68.959	Cyprinodon_variegatus
ENSMICG00000043190	EDC3	99	68.627	ENSDARG00000051931	edc3	99	68.811	Danio_rerio
ENSMICG00000043190	EDC3	100	84.884	ENSDNOG00000030661	EDC3	100	84.884	Dasypus_novemcinctus
ENSMICG00000043190	EDC3	64	100.000	ENSETEG00000002398	-	64	100.000	Echinops_telfairi
ENSMICG00000043190	EDC3	100	97.047	ENSEASG00005005071	EDC3	100	97.047	Equus_asinus_asinus
ENSMICG00000043190	EDC3	100	97.047	ENSECAG00000017994	EDC3	100	97.047	Equus_caballus
ENSMICG00000043190	EDC3	100	62.646	ENSELUG00000007607	EDC3	100	62.646	Esox_lucius
ENSMICG00000043190	EDC3	100	66.277	ENSELUG00000005794	edc3	100	66.277	Esox_lucius
ENSMICG00000043190	EDC3	100	96.063	ENSFCAG00000002014	EDC3	100	96.063	Felis_catus
ENSMICG00000043190	EDC3	98	84.569	ENSFALG00000004543	EDC3	96	84.569	Ficedula_albicollis
ENSMICG00000043190	EDC3	100	94.488	ENSFDAG00000012582	EDC3	100	94.488	Fukomys_damarensis
ENSMICG00000043190	EDC3	100	69.804	ENSFHEG00000009375	edc3	100	69.804	Fundulus_heteroclitus
ENSMICG00000043190	EDC3	100	68.226	ENSGMOG00000002715	edc3	100	68.226	Gadus_morhua
ENSMICG00000043190	EDC3	100	88.780	ENSGALG00000040181	EDC3	100	88.780	Gallus_gallus
ENSMICG00000043190	EDC3	100	68.173	ENSGAFG00000014433	edc3	100	68.235	Gambusia_affinis
ENSMICG00000043190	EDC3	99	55.598	ENSGACG00000014671	EDC3	99	56.977	Gasterosteus_aculeatus
ENSMICG00000043190	EDC3	100	68.369	ENSGACG00000009783	edc3	100	68.369	Gasterosteus_aculeatus
ENSMICG00000043190	EDC3	100	88.976	ENSGAGG00000023477	EDC3	100	88.976	Gopherus_agassizii
ENSMICG00000043190	EDC3	100	97.244	ENSGGOG00000003552	EDC3	100	97.244	Gorilla_gorilla
ENSMICG00000043190	EDC3	100	67.976	ENSHBUG00000003635	edc3	100	67.976	Haplochromis_burtoni
ENSMICG00000043190	EDC3	99	59.180	ENSHBUG00000020817	EDC3	99	59.180	Haplochromis_burtoni
ENSMICG00000043190	EDC3	100	67.123	ENSHCOG00000016834	edc3	100	67.123	Hippocampus_comes
ENSMICG00000043190	EDC3	99	70.841	ENSIPUG00000005695	edc3	100	70.841	Ictalurus_punctatus
ENSMICG00000043190	EDC3	100	97.441	ENSSTOG00000013936	EDC3	100	97.441	Ictidomys_tridecemlineatus
ENSMICG00000043190	EDC3	100	95.669	ENSJJAG00000008074	Edc3	100	95.669	Jaculus_jaculus
ENSMICG00000043190	EDC3	100	55.315	ENSKMAG00000001987	EDC3	100	55.315	Kryptolebias_marmoratus
ENSMICG00000043190	EDC3	100	69.155	ENSKMAG00000001243	edc3	100	69.155	Kryptolebias_marmoratus
ENSMICG00000043190	EDC3	100	58.140	ENSLBEG00000017984	EDC3	100	58.140	Labrus_bergylta
ENSMICG00000043190	EDC3	100	69.412	ENSLBEG00000013435	edc3	99	69.412	Labrus_bergylta
ENSMICG00000043190	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSMICG00000043190	EDC3	99	67.641	ENSLOCG00000014625	edc3	99	67.641	Lepisosteus_oculatus
ENSMICG00000043190	EDC3	100	95.669	ENSLAFG00000002992	EDC3	100	95.669	Loxodonta_africana
ENSMICG00000043190	EDC3	100	96.850	ENSMFAG00000043074	EDC3	100	96.850	Macaca_fascicularis
ENSMICG00000043190	EDC3	100	96.850	ENSMMUG00000011071	EDC3	100	96.850	Macaca_mulatta
ENSMICG00000043190	EDC3	100	96.850	ENSMNEG00000035316	EDC3	100	96.850	Macaca_nemestrina
ENSMICG00000043190	EDC3	100	97.244	ENSMLEG00000030372	EDC3	100	97.244	Mandrillus_leucophaeus
ENSMICG00000043190	EDC3	100	69.941	ENSMAMG00000000505	edc3	100	69.941	Mastacembelus_armatus
ENSMICG00000043190	EDC3	99	56.641	ENSMAMG00000005423	-	99	56.641	Mastacembelus_armatus
ENSMICG00000043190	EDC3	100	67.976	ENSMZEG00005004892	edc3	100	67.976	Maylandia_zebra
ENSMICG00000043190	EDC3	99	58.789	ENSMZEG00005005654	EDC3	99	58.789	Maylandia_zebra
ENSMICG00000043190	EDC3	100	88.189	ENSMGAG00000002617	EDC3	100	88.189	Meleagris_gallopavo
ENSMICG00000043190	EDC3	100	95.866	ENSMOCG00000016205	Edc3	100	95.866	Microtus_ochrogaster
ENSMICG00000043190	EDC3	99	69.155	ENSMMOG00000012278	edc3	99	69.488	Mola_mola
ENSMICG00000043190	EDC3	100	92.126	ENSMODG00000009442	EDC3	100	92.126	Monodelphis_domestica
ENSMICG00000043190	EDC3	100	69.941	ENSMALG00000008658	edc3	100	69.941	Monopterus_albus
ENSMICG00000043190	EDC3	100	96.063	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSMICG00000043190	EDC3	100	96.063	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSMICG00000043190	EDC3	100	95.866	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSMICG00000043190	EDC3	100	95.866	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSMICG00000043190	EDC3	100	95.866	ENSMPUG00000017293	EDC3	100	95.866	Mustela_putorius_furo
ENSMICG00000043190	EDC3	100	96.275	ENSMLUG00000016382	EDC3	100	96.275	Myotis_lucifugus
ENSMICG00000043190	EDC3	100	95.669	ENSNGAG00000010923	Edc3	100	95.669	Nannospalax_galili
ENSMICG00000043190	EDC3	100	68.369	ENSNBRG00000002434	edc3	100	68.369	Neolamprologus_brichardi
ENSMICG00000043190	EDC3	99	59.533	ENSNBRG00000007881	EDC3	99	59.533	Neolamprologus_brichardi
ENSMICG00000043190	EDC3	100	87.598	ENSNLEG00000014577	EDC3	100	87.598	Nomascus_leucogenys
ENSMICG00000043190	EDC3	100	91.142	ENSMEUG00000009077	EDC3	100	91.142	Notamacropus_eugenii
ENSMICG00000043190	EDC3	79	98.148	ENSOPRG00000009540	-	79	98.148	Ochotona_princeps
ENSMICG00000043190	EDC3	100	68.173	ENSONIG00000008434	edc3	100	68.173	Oreochromis_niloticus
ENSMICG00000043190	EDC3	100	59.922	ENSONIG00000002932	-	100	59.922	Oreochromis_niloticus
ENSMICG00000043190	EDC3	78	91.940	ENSOCUG00000017740	EDC3	86	91.940	Oryctolagus_cuniculus
ENSMICG00000043190	EDC3	100	67.976	ENSORLG00000004883	edc3	100	67.976	Oryzias_latipes
ENSMICG00000043190	EDC3	100	56.809	ENSORLG00000014399	-	98	56.809	Oryzias_latipes
ENSMICG00000043190	EDC3	100	56.809	ENSORLG00020019446	-	100	56.809	Oryzias_latipes_hni
ENSMICG00000043190	EDC3	100	67.976	ENSORLG00020012262	edc3	100	67.976	Oryzias_latipes_hni
ENSMICG00000043190	EDC3	100	67.773	ENSORLG00015005634	edc3	100	67.773	Oryzias_latipes_hsok
ENSMICG00000043190	EDC3	100	56.226	ENSORLG00015017635	-	96	56.226	Oryzias_latipes_hsok
ENSMICG00000043190	EDC3	100	56.836	ENSOMEG00000017354	EDC3	100	56.836	Oryzias_melastigma
ENSMICG00000043190	EDC3	100	69.216	ENSOMEG00000014026	edc3	100	69.216	Oryzias_melastigma
ENSMICG00000043190	EDC3	100	98.228	ENSOGAG00000014441	EDC3	100	98.228	Otolemur_garnettii
ENSMICG00000043190	EDC3	100	95.481	ENSOARG00000003476	EDC3	100	95.874	Ovis_aries
ENSMICG00000043190	EDC3	100	97.244	ENSPPAG00000040143	EDC3	100	97.244	Pan_paniscus
ENSMICG00000043190	EDC3	100	96.063	ENSPPRG00000006257	EDC3	100	96.063	Panthera_pardus
ENSMICG00000043190	EDC3	100	96.063	ENSPTIG00000017424	EDC3	100	96.063	Panthera_tigris_altaica
ENSMICG00000043190	EDC3	100	97.244	ENSPTRG00000007279	EDC3	100	97.244	Pan_troglodytes
ENSMICG00000043190	EDC3	100	97.244	ENSPANG00000015997	EDC3	100	97.244	Papio_anubis
ENSMICG00000043190	EDC3	100	66.211	ENSPKIG00000019810	EDC3	100	66.211	Paramormyrops_kingsleyae
ENSMICG00000043190	EDC3	100	69.141	ENSPKIG00000004416	edc3	100	70.117	Paramormyrops_kingsleyae
ENSMICG00000043190	EDC3	100	83.858	ENSPSIG00000008474	EDC3	100	83.858	Pelodiscus_sinensis
ENSMICG00000043190	EDC3	100	66.928	ENSPMGG00000007223	edc3	100	66.928	Periophthalmus_magnuspinnatus
ENSMICG00000043190	EDC3	100	96.260	ENSPEMG00000015260	Edc3	100	96.260	Peromyscus_maniculatus_bairdii
ENSMICG00000043190	EDC3	100	89.961	ENSPCIG00000006276	EDC3	70	90.138	Phascolarctos_cinereus
ENSMICG00000043190	EDC3	100	69.066	ENSPFOG00000012204	edc3	100	69.066	Poecilia_formosa
ENSMICG00000043190	EDC3	100	69.066	ENSPLAG00000014420	edc3	100	69.066	Poecilia_latipinna
ENSMICG00000043190	EDC3	100	69.066	ENSPMEG00000023289	edc3	100	69.066	Poecilia_mexicana
ENSMICG00000043190	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSMICG00000043190	EDC3	100	96.063	ENSPPYG00000006642	EDC3	100	96.063	Pongo_abelii
ENSMICG00000043190	EDC3	88	98.148	ENSPCAG00000002802	EDC3	88	98.148	Procavia_capensis
ENSMICG00000043190	EDC3	100	97.835	ENSPCOG00000013364	EDC3	100	97.835	Propithecus_coquereli
ENSMICG00000043190	EDC3	100	96.063	ENSPVAG00000014733	EDC3	100	96.063	Pteropus_vampyrus
ENSMICG00000043190	EDC3	99	59.180	ENSPNYG00000009669	EDC3	99	59.180	Pundamilia_nyererei
ENSMICG00000043190	EDC3	100	67.976	ENSPNYG00000021797	edc3	100	67.976	Pundamilia_nyererei
ENSMICG00000043190	EDC3	100	70.817	ENSPNAG00000019657	edc3	100	70.817	Pygocentrus_nattereri
ENSMICG00000043190	EDC3	99	96.634	ENSRNOG00000019579	Edc3	99	96.634	Rattus_norvegicus
ENSMICG00000043190	EDC3	100	96.850	ENSRBIG00000019488	EDC3	100	96.850	Rhinopithecus_bieti
ENSMICG00000043190	EDC3	100	96.850	ENSRROG00000034959	EDC3	100	96.850	Rhinopithecus_roxellana
ENSMICG00000043190	EDC3	100	97.441	ENSSBOG00000004896	EDC3	100	97.441	Saimiri_boliviensis_boliviensis
ENSMICG00000043190	EDC3	96	90.798	ENSSHAG00000015075	EDC3	95	90.798	Sarcophilus_harrisii
ENSMICG00000043190	EDC3	100	71.595	ENSSFOG00015016939	edc3	100	71.595	Scleropages_formosus
ENSMICG00000043190	EDC3	100	63.250	ENSSFOG00015002439	edc3	100	65.370	Scleropages_formosus
ENSMICG00000043190	EDC3	100	69.020	ENSSMAG00000010695	edc3	100	69.548	Scophthalmus_maximus
ENSMICG00000043190	EDC3	99	56.725	ENSSMAG00000010176	-	99	56.923	Scophthalmus_maximus
ENSMICG00000043190	EDC3	100	59.806	ENSSDUG00000007671	EDC3	100	59.806	Seriola_dumerili
ENSMICG00000043190	EDC3	100	69.412	ENSSDUG00000021844	edc3	100	69.412	Seriola_dumerili
ENSMICG00000043190	EDC3	100	69.412	ENSSLDG00000022046	edc3	100	69.412	Seriola_lalandi_dorsalis
ENSMICG00000043190	EDC3	81	96.774	ENSSARG00000003907	EDC3	80	96.774	Sorex_araneus
ENSMICG00000043190	EDC3	100	88.583	ENSSPUG00000008232	EDC3	100	88.583	Sphenodon_punctatus
ENSMICG00000043190	EDC3	100	70.334	ENSSPAG00000010009	edc3	100	70.334	Stegastes_partitus
ENSMICG00000043190	EDC3	100	57.782	ENSSPAG00000020327	EDC3	100	57.782	Stegastes_partitus
ENSMICG00000043190	EDC3	100	96.850	ENSSSCG00000001903	EDC3	100	96.850	Sus_scrofa
ENSMICG00000043190	EDC3	100	87.992	ENSTGUG00000004007	EDC3	100	87.992	Taeniopygia_guttata
ENSMICG00000043190	EDC3	100	70.334	ENSTRUG00000017078	edc3	100	70.334	Takifugu_rubripes
ENSMICG00000043190	EDC3	100	69.276	ENSTNIG00000016047	edc3	100	69.276	Tetraodon_nigroviridis
ENSMICG00000043190	EDC3	100	96.457	ENSTTRG00000007990	EDC3	100	96.457	Tursiops_truncatus
ENSMICG00000043190	EDC3	100	95.866	ENSUAMG00000026710	-	100	95.866	Ursus_americanus
ENSMICG00000043190	EDC3	100	95.866	ENSUMAG00000005006	EDC3	96	95.866	Ursus_maritimus
ENSMICG00000043190	EDC3	79	85.185	ENSVPAG00000003499	-	79	85.185	Vicugna_pacos
ENSMICG00000043190	EDC3	100	96.654	ENSVVUG00000018601	EDC3	100	96.654	Vulpes_vulpes
ENSMICG00000043190	EDC3	68	82.184	ENSXETG00000010622	edc3	99	83.333	Xenopus_tropicalis
ENSMICG00000043190	EDC3	100	69.155	ENSXMAG00000007377	edc3	100	69.155	Xiphophorus_maculatus