EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000043554 (Gene tree)
Gene ID: 105864728
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 2424 bases
Position: chr3:75970962-75973385
Accession: 105864728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000041544	Exo_endo_phos	PF03372.23	7.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000069693	APEX1-201	1349	XM_012752762	ENSMICP00000041544	318 (aa)	XP_012608216	UPI0001772E34
ENSMICT00000042222	APEX1-202	45	-	ENSMICP00000023531	14 (aa)	-	UPI00085B16E6

Gene Model

Click here to download ENSMICG00000043554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000043554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000043554	APEX1	100	95.283	ENSG00000100823	APEX1	100	95.283	Homo_sapiens
ENSMICG00000043554	APEX1	88	68.817	ENSAPOG00000017002	apex1	98	65.886	Acanthochromis_polyacanthus
ENSMICG00000043554	APEX1	100	97.170	ENSAMEG00000005418	APEX1	100	97.170	Ailuropoda_melanoleuca
ENSMICG00000043554	APEX1	87	70.144	ENSACIG00000010653	apex1	97	69.204	Amphilophus_citrinellus
ENSMICG00000043554	APEX1	88	68.459	ENSAOCG00000009649	apex1	99	64.241	Amphiprion_ocellaris
ENSMICG00000043554	APEX1	88	68.459	ENSAPEG00000021453	apex1	99	64.241	Amphiprion_percula
ENSMICG00000043554	APEX1	99	66.456	ENSATEG00000002883	apex1	97	67.089	Anabas_testudineus
ENSMICG00000043554	APEX1	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSMICG00000043554	APEX1	100	96.226	ENSANAG00000030117	APEX1	100	96.226	Aotus_nancymaae
ENSMICG00000043554	APEX1	87	70.290	ENSACLG00000018441	apex1	99	65.300	Astatotilapia_calliptera
ENSMICG00000043554	APEX1	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSMICG00000043554	APEX1	100	96.226	ENSBTAG00000002745	APEX1	100	96.226	Bos_taurus
ENSMICG00000043554	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSMICG00000043554	APEX1	100	96.226	ENSCJAG00000009726	APEX1	100	96.226	Callithrix_jacchus
ENSMICG00000043554	APEX1	100	95.283	ENSCAFG00000032033	APEX1	100	95.283	Canis_familiaris
ENSMICG00000043554	APEX1	100	95.283	ENSCAFG00020014377	-	100	95.283	Canis_lupus_dingo
ENSMICG00000043554	APEX1	54	91.279	ENSCAFG00020023002	-	96	91.279	Canis_lupus_dingo
ENSMICG00000043554	APEX1	98	76.603	ENSCHIG00000014537	-	99	76.603	Capra_hircus
ENSMICG00000043554	APEX1	100	95.597	ENSCHIG00000007298	-	100	95.597	Capra_hircus
ENSMICG00000043554	APEX1	100	96.226	ENSTSYG00000034813	APEX1	100	96.226	Carlito_syrichta
ENSMICG00000043554	APEX1	85	88.561	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSMICG00000043554	APEX1	100	94.969	ENSCPOG00000030909	APEX1	100	94.969	Cavia_porcellus
ENSMICG00000043554	APEX1	100	96.226	ENSCCAG00000033056	-	100	96.226	Cebus_capucinus
ENSMICG00000043554	APEX1	100	82.390	ENSCCAG00000031931	-	100	82.390	Cebus_capucinus
ENSMICG00000043554	APEX1	100	95.283	ENSCATG00000015580	APEX1	100	95.283	Cercocebus_atys
ENSMICG00000043554	APEX1	100	95.597	ENSCLAG00000001002	APEX1	100	95.597	Chinchilla_lanigera
ENSMICG00000043554	APEX1	100	94.969	ENSCSAG00000016670	-	100	94.969	Chlorocebus_sabaeus
ENSMICG00000043554	APEX1	100	94.969	ENSCSAG00000016685	-	100	94.969	Chlorocebus_sabaeus
ENSMICG00000043554	APEX1	100	70.533	ENSCPBG00000009567	APEX1	100	70.533	Chrysemys_picta_bellii
ENSMICG00000043554	APEX1	91	55.254	ENSCING00000008137	-	94	55.254	Ciona_intestinalis
ENSMICG00000043554	APEX1	90	48.333	ENSCSAVG00000007144	-	100	53.282	Ciona_savignyi
ENSMICG00000043554	APEX1	100	95.283	ENSCANG00000030726	APEX1	100	95.283	Colobus_angolensis_palliatus
ENSMICG00000043554	APEX1	100	91.509	ENSCGRG00001017046	Apex1	100	91.509	Cricetulus_griseus_chok1gshd
ENSMICG00000043554	APEX1	100	91.509	ENSCGRG00000008984	Apex1	100	91.509	Cricetulus_griseus_crigri
ENSMICG00000043554	APEX1	99	64.984	ENSCSEG00000017499	apex1	99	64.984	Cynoglossus_semilaevis
ENSMICG00000043554	APEX1	88	70.609	ENSCVAG00000022075	apex1	99	65.506	Cyprinodon_variegatus
ENSMICG00000043554	APEX1	100	65.409	ENSDARG00000045843	apex1	100	65.094	Danio_rerio
ENSMICG00000043554	APEX1	100	91.509	ENSDNOG00000042234	APEX1	95	91.509	Dasypus_novemcinctus
ENSMICG00000043554	APEX1	100	95.912	ENSDORG00000001616	Apex1	100	95.912	Dipodomys_ordii
ENSMICG00000043554	APEX1	100	94.654	ENSETEG00000004855	-	100	94.654	Echinops_telfairi
ENSMICG00000043554	APEX1	75	63.598	ENSEBUG00000000622	-	92	63.598	Eptatretus_burgeri
ENSMICG00000043554	APEX1	100	97.799	ENSEASG00005017489	APEX1	74	97.799	Equus_asinus_asinus
ENSMICG00000043554	APEX1	100	97.799	ENSECAG00000022325	APEX1	82	97.799	Equus_caballus
ENSMICG00000043554	APEX1	91	94.444	ENSEEUG00000012569	APEX1	100	94.444	Erinaceus_europaeus
ENSMICG00000043554	APEX1	100	64.151	ENSELUG00000021706	apex1	100	65.312	Esox_lucius
ENSMICG00000043554	APEX1	100	97.170	ENSFCAG00000030869	APEX1	100	97.170	Felis_catus
ENSMICG00000043554	APEX1	100	94.654	ENSFDAG00000006120	APEX1	100	94.654	Fukomys_damarensis
ENSMICG00000043554	APEX1	99	66.772	ENSFHEG00000009031	apex1	83	66.772	Fundulus_heteroclitus
ENSMICG00000043554	APEX1	99	61.129	ENSGMOG00000007943	apex1	99	61.129	Gadus_morhua
ENSMICG00000043554	APEX1	99	67.089	ENSGAFG00000005311	apex1	99	67.089	Gambusia_affinis
ENSMICG00000043554	APEX1	99	64.241	ENSGACG00000019497	apex1	99	68.421	Gasterosteus_aculeatus
ENSMICG00000043554	APEX1	100	69.906	ENSGAGG00000014999	APEX1	100	69.906	Gopherus_agassizii
ENSMICG00000043554	APEX1	100	95.597	ENSGGOG00000002128	APEX1	100	95.597	Gorilla_gorilla
ENSMICG00000043554	APEX1	99	64.557	ENSHBUG00000005894	apex1	99	65.190	Haplochromis_burtoni
ENSMICG00000043554	APEX1	100	95.597	ENSHGLG00000002848	APEX1	100	95.597	Heterocephalus_glaber_female
ENSMICG00000043554	APEX1	100	95.597	ENSHGLG00100017878	APEX1	100	95.597	Heterocephalus_glaber_male
ENSMICG00000043554	APEX1	99	65.409	ENSHCOG00000009961	apex1	99	65.409	Hippocampus_comes
ENSMICG00000043554	APEX1	100	68.025	ENSIPUG00000005799	apex1	100	68.025	Ictalurus_punctatus
ENSMICG00000043554	APEX1	100	95.597	ENSSTOG00000010096	APEX1	100	95.597	Ictidomys_tridecemlineatus
ENSMICG00000043554	APEX1	100	85.220	ENSJJAG00000003660	-	100	85.220	Jaculus_jaculus
ENSMICG00000043554	APEX1	100	94.969	ENSJJAG00000012067	-	100	94.969	Jaculus_jaculus
ENSMICG00000043554	APEX1	100	82.075	ENSJJAG00000020465	-	96	86.242	Jaculus_jaculus
ENSMICG00000043554	APEX1	88	70.609	ENSKMAG00000021171	apex1	99	65.506	Kryptolebias_marmoratus
ENSMICG00000043554	APEX1	99	62.975	ENSLBEG00000010248	apex1	99	62.975	Labrus_bergylta
ENSMICG00000043554	APEX1	100	66.562	ENSLACG00000008617	APEX1	100	66.562	Latimeria_chalumnae
ENSMICG00000043554	APEX1	100	64.907	ENSLOCG00000015516	apex1	99	64.907	Lepisosteus_oculatus
ENSMICG00000043554	APEX1	100	93.396	ENSLAFG00000021872	APEX1	100	93.396	Loxodonta_africana
ENSMICG00000043554	APEX1	100	95.283	ENSMFAG00000002565	APEX1	100	95.283	Macaca_fascicularis
ENSMICG00000043554	APEX1	100	95.283	ENSMMUG00000048039	APEX1	100	95.283	Macaca_mulatta
ENSMICG00000043554	APEX1	100	95.283	ENSMNEG00000036944	APEX1	100	95.283	Macaca_nemestrina
ENSMICG00000043554	APEX1	100	95.283	ENSMLEG00000042125	APEX1	100	95.283	Mandrillus_leucophaeus
ENSMICG00000043554	APEX1	88	70.609	ENSMAMG00000023526	apex1	99	65.823	Mastacembelus_armatus
ENSMICG00000043554	APEX1	87	70.290	ENSMZEG00005014187	apex1	99	65.300	Maylandia_zebra
ENSMICG00000043554	APEX1	100	92.453	ENSMAUG00000013994	Apex1	100	92.453	Mesocricetus_auratus
ENSMICG00000043554	APEX1	100	92.453	ENSMOCG00000013721	Apex1	100	92.453	Microtus_ochrogaster
ENSMICG00000043554	APEX1	88	66.786	ENSMMOG00000010031	apex1	97	62.696	Mola_mola
ENSMICG00000043554	APEX1	100	83.438	ENSMODG00000007125	APEX1	100	85.093	Monodelphis_domestica
ENSMICG00000043554	APEX1	88	63.441	ENSMALG00000011699	apex1	79	62.116	Monopterus_albus
ENSMICG00000043554	APEX1	99	94.637	MGP_CAROLIEiJ_G0019209	Apex1	99	94.637	Mus_caroli
ENSMICG00000043554	APEX1	100	95.283	ENSMUSG00000035960	Apex1	100	95.283	Mus_musculus
ENSMICG00000043554	APEX1	100	94.654	MGP_PahariEiJ_G0030232	Apex1	100	94.654	Mus_pahari
ENSMICG00000043554	APEX1	100	95.283	MGP_SPRETEiJ_G0020101	Apex1	100	95.283	Mus_spretus
ENSMICG00000043554	APEX1	100	95.938	ENSMLUG00000028957	APEX1	100	95.938	Myotis_lucifugus
ENSMICG00000043554	APEX1	100	94.340	ENSNGAG00000002725	-	100	94.340	Nannospalax_galili
ENSMICG00000043554	APEX1	100	71.069	ENSNGAG00000021748	-	99	71.069	Nannospalax_galili
ENSMICG00000043554	APEX1	87	69.928	ENSNBRG00000005334	apex1	91	64.984	Neolamprologus_brichardi
ENSMICG00000043554	APEX1	100	95.912	ENSNLEG00000010839	APEX1	100	95.912	Nomascus_leucogenys
ENSMICG00000043554	APEX1	100	86.478	ENSMEUG00000014519	APEX1	100	86.478	Notamacropus_eugenii
ENSMICG00000043554	APEX1	100	94.654	ENSOPRG00000014029	APEX1	100	94.654	Ochotona_princeps
ENSMICG00000043554	APEX1	100	72.222	ENSODEG00000006583	-	100	72.222	Octodon_degus
ENSMICG00000043554	APEX1	97	76.375	ENSODEG00000004777	-	99	76.375	Octodon_degus
ENSMICG00000043554	APEX1	100	95.912	ENSODEG00000001703	-	100	95.912	Octodon_degus
ENSMICG00000043554	APEX1	87	70.504	ENSONIG00000012089	apex1	99	65.615	Oreochromis_niloticus
ENSMICG00000043554	APEX1	90	82.456	ENSOANG00000008836	APEX1	80	78.086	Ornithorhynchus_anatinus
ENSMICG00000043554	APEX1	100	95.597	ENSOCUG00000005022	APEX1	100	95.597	Oryctolagus_cuniculus
ENSMICG00000043554	APEX1	99	66.352	ENSORLG00000012378	apex1	99	66.352	Oryzias_latipes
ENSMICG00000043554	APEX1	99	66.352	ENSORLG00020021371	apex1	99	66.352	Oryzias_latipes_hni
ENSMICG00000043554	APEX1	99	66.352	ENSORLG00015020089	apex1	99	66.352	Oryzias_latipes_hsok
ENSMICG00000043554	APEX1	99	66.038	ENSOMEG00000018876	apex1	99	66.038	Oryzias_melastigma
ENSMICG00000043554	APEX1	100	97.484	ENSOGAG00000013335	-	100	97.484	Otolemur_garnettii
ENSMICG00000043554	APEX1	98	86.859	ENSOGAG00000029355	-	100	86.859	Otolemur_garnettii
ENSMICG00000043554	APEX1	100	94.654	ENSOARG00000019740	-	100	94.654	Ovis_aries
ENSMICG00000043554	APEX1	99	80.696	ENSOARG00000014424	-	100	80.696	Ovis_aries
ENSMICG00000043554	APEX1	97	91.883	ENSOARG00000001876	-	100	91.883	Ovis_aries
ENSMICG00000043554	APEX1	100	95.597	ENSPPAG00000038760	APEX1	100	95.597	Pan_paniscus
ENSMICG00000043554	APEX1	100	96.855	ENSPPRG00000011794	APEX1	100	96.855	Panthera_pardus
ENSMICG00000043554	APEX1	100	97.170	ENSPTIG00000014829	APEX1	100	97.170	Panthera_tigris_altaica
ENSMICG00000043554	APEX1	100	95.597	ENSPTRG00000006093	APEX1	100	95.597	Pan_troglodytes
ENSMICG00000043554	APEX1	100	95.283	ENSPANG00000022757	APEX1	100	95.283	Papio_anubis
ENSMICG00000043554	APEX1	87	68.231	ENSPKIG00000003504	apex1	100	63.863	Paramormyrops_kingsleyae
ENSMICG00000043554	APEX1	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSMICG00000043554	APEX1	100	94.654	ENSPEMG00000019097	Apex1	100	94.654	Peromyscus_maniculatus_bairdii
ENSMICG00000043554	APEX1	94	64.667	ENSPMAG00000007275	-	99	64.667	Petromyzon_marinus
ENSMICG00000043554	APEX1	100	83.386	ENSPCIG00000023274	APEX1	100	85.358	Phascolarctos_cinereus
ENSMICG00000043554	APEX1	99	67.089	ENSPFOG00000004178	apex1	99	67.089	Poecilia_formosa
ENSMICG00000043554	APEX1	99	66.772	ENSPLAG00000012779	apex1	99	66.772	Poecilia_latipinna
ENSMICG00000043554	APEX1	99	67.089	ENSPMEG00000019623	apex1	99	67.089	Poecilia_mexicana
ENSMICG00000043554	APEX1	88	71.685	ENSPREG00000014298	apex1	99	66.772	Poecilia_reticulata
ENSMICG00000043554	APEX1	100	95.283	ENSPPYG00000005565	APEX1	100	95.283	Pongo_abelii
ENSMICG00000043554	APEX1	100	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSMICG00000043554	APEX1	100	99.371	ENSPCOG00000021564	APEX1	100	99.371	Propithecus_coquereli
ENSMICG00000043554	APEX1	100	95.625	ENSPVAG00000010736	APEX1	100	95.625	Pteropus_vampyrus
ENSMICG00000043554	APEX1	87	70.290	ENSPNYG00000023940	apex1	99	65.300	Pundamilia_nyererei
ENSMICG00000043554	APEX1	93	64.527	ENSPNAG00000020897	apex1	96	64.407	Pygocentrus_nattereri
ENSMICG00000043554	APEX1	100	94.340	ENSRNOG00000009663	Apex1	100	94.340	Rattus_norvegicus
ENSMICG00000043554	APEX1	100	95.283	ENSRBIG00000038325	APEX1	99	95.283	Rhinopithecus_bieti
ENSMICG00000043554	APEX1	100	95.912	ENSSBOG00000018921	-	100	95.912	Saimiri_boliviensis_boliviensis
ENSMICG00000043554	APEX1	100	81.132	ENSSBOG00000031372	-	100	81.132	Saimiri_boliviensis_boliviensis
ENSMICG00000043554	APEX1	100	82.407	ENSSHAG00000013524	APEX1	100	83.436	Sarcophilus_harrisii
ENSMICG00000043554	APEX1	100	61.950	ENSSFOG00015001948	apex1	100	61.635	Scleropages_formosus
ENSMICG00000043554	APEX1	87	68.345	ENSSMAG00000013348	apex1	99	64.353	Scophthalmus_maximus
ENSMICG00000043554	APEX1	99	64.557	ENSSDUG00000016377	apex1	99	64.557	Seriola_dumerili
ENSMICG00000043554	APEX1	88	69.534	ENSSLDG00000023005	apex1	99	64.873	Seriola_lalandi_dorsalis
ENSMICG00000043554	APEX1	90	72.632	ENSSPUG00000000531	APEX1	95	72.632	Sphenodon_punctatus
ENSMICG00000043554	APEX1	99	64.241	ENSSPAG00000000458	apex1	99	64.241	Stegastes_partitus
ENSMICG00000043554	APEX1	96	56.129	ENSSSCG00000039705	-	99	58.278	Sus_scrofa
ENSMICG00000043554	APEX1	100	95.283	ENSSSCG00000040060	-	100	95.283	Sus_scrofa
ENSMICG00000043554	APEX1	74	59.322	ENSTGUG00000014378	APEX1	100	59.322	Taeniopygia_guttata
ENSMICG00000043554	APEX1	87	66.547	ENSTRUG00000004268	apex1	95	62.658	Takifugu_rubripes
ENSMICG00000043554	APEX1	99	63.608	ENSTNIG00000005778	apex1	99	63.608	Tetraodon_nigroviridis
ENSMICG00000043554	APEX1	100	92.138	ENSTBEG00000006405	APEX1	100	92.138	Tupaia_belangeri
ENSMICG00000043554	APEX1	74	96.186	ENSTTRG00000007860	APEX1	100	96.186	Tursiops_truncatus
ENSMICG00000043554	APEX1	100	96.855	ENSUAMG00000010457	APEX1	100	96.855	Ursus_americanus
ENSMICG00000043554	APEX1	100	96.855	ENSUMAG00000009178	APEX1	100	96.855	Ursus_maritimus
ENSMICG00000043554	APEX1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSMICG00000043554	APEX1	100	95.912	ENSVVUG00000009010	APEX1	100	95.912	Vulpes_vulpes
ENSMICG00000043554	APEX1	100	66.875	ENSXETG00000024773	apex1	100	66.875	Xenopus_tropicalis
ENSMICG00000043554	APEX1	88	71.685	ENSXCOG00000015233	apex1	99	66.772	Xiphophorus_couchianus
ENSMICG00000043554	APEX1	88	71.685	ENSXMAG00000006195	apex1	99	66.772	Xiphophorus_maculatus