EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000044012 (Gene tree)
Gene ID: 105878940
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 7438 bases
Position: chr16:6622121-6629558
Accession: 105878940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000045346	tRNA_int_end_N2	PF12928.7	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000065838	TSEN54-201	1944	XM_012778810	ENSMICP00000045346	509 (aa)	XP_012634264	UPI000643CB7D

Gene Model

Click here to download ENSMICG00000044012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000044012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000044012	TSEN54	100	84.221	ENSG00000182173	TSEN54	100	94.444	Homo_sapiens
ENSMICG00000044012	TSEN54	96	47.162	ENSAPOG00000009659	tsen54	99	43.721	Acanthochromis_polyacanthus
ENSMICG00000044012	TSEN54	99	82.642	ENSAMEG00000009414	TSEN54	99	82.642	Ailuropoda_melanoleuca
ENSMICG00000044012	TSEN54	96	47.461	ENSAOCG00000000152	tsen54	95	46.124	Amphiprion_ocellaris
ENSMICG00000044012	TSEN54	96	46.875	ENSAPEG00000018931	tsen54	94	45.543	Amphiprion_percula
ENSMICG00000044012	TSEN54	96	43.454	ENSATEG00000019860	tsen54	97	41.667	Anabas_testudineus
ENSMICG00000044012	TSEN54	85	52.423	ENSAPLG00000009419	TSEN54	100	51.982	Anas_platyrhynchos
ENSMICG00000044012	TSEN54	99	51.595	ENSACAG00000006714	TSEN54	99	51.136	Anolis_carolinensis
ENSMICG00000044012	TSEN54	99	84.586	ENSANAG00000024061	TSEN54	99	85.905	Aotus_nancymaae
ENSMICG00000044012	TSEN54	96	47.723	ENSACLG00000019800	tsen54	96	46.548	Astatotilapia_calliptera
ENSMICG00000044012	TSEN54	96	49.296	ENSAMXG00000006546	tsen54	96	48.000	Astyanax_mexicanus
ENSMICG00000044012	TSEN54	100	82.519	ENSBTAG00000000824	TSEN54	100	82.143	Bos_taurus
ENSMICG00000044012	TSEN54	99	83.430	ENSCJAG00000014278	TSEN54	99	84.762	Callithrix_jacchus
ENSMICG00000044012	TSEN54	100	84.369	ENSCAFG00000004798	TSEN54	100	84.369	Canis_familiaris
ENSMICG00000044012	TSEN54	100	84.369	ENSCAFG00020000312	TSEN54	100	84.369	Canis_lupus_dingo
ENSMICG00000044012	TSEN54	100	81.214	ENSCHIG00000019908	TSEN54	100	80.455	Capra_hircus
ENSMICG00000044012	TSEN54	85	83.260	ENSTSYG00000037439	TSEN54	100	83.260	Carlito_syrichta
ENSMICG00000044012	TSEN54	99	83.815	ENSCCAG00000036624	TSEN54	99	84.952	Cebus_capucinus
ENSMICG00000044012	TSEN54	97	85.352	ENSCATG00000042877	TSEN54	99	85.714	Cercocebus_atys
ENSMICG00000044012	TSEN54	97	81.836	ENSCLAG00000002924	TSEN54	99	81.143	Chinchilla_lanigera
ENSMICG00000044012	TSEN54	100	85.361	ENSCSAG00000004809	TSEN54	100	85.551	Chlorocebus_sabaeus
ENSMICG00000044012	TSEN54	99	56.262	ENSCPBG00000028071	TSEN54	99	56.075	Chrysemys_picta_bellii
ENSMICG00000044012	TSEN54	100	84.411	ENSCANG00000028053	TSEN54	100	84.601	Colobus_angolensis_palliatus
ENSMICG00000044012	TSEN54	100	78.857	ENSCGRG00001020029	Tsen54	100	78.095	Cricetulus_griseus_chok1gshd
ENSMICG00000044012	TSEN54	84	76.697	ENSCGRG00000016289	Tsen54	100	75.792	Cricetulus_griseus_crigri
ENSMICG00000044012	TSEN54	80	39.623	ENSCSEG00000020586	tsen54	99	38.443	Cynoglossus_semilaevis
ENSMICG00000044012	TSEN54	80	46.210	ENSDARG00000036844	tsen54	99	46.324	Danio_rerio
ENSMICG00000044012	TSEN54	100	82.298	ENSDNOG00000018452	TSEN54	100	82.298	Dasypus_novemcinctus
ENSMICG00000044012	TSEN54	100	82.890	ENSDORG00000004073	Tsen54	100	82.129	Dipodomys_ordii
ENSMICG00000044012	TSEN54	97	37.429	ENSEBUG00000005203	TSEN54	95	36.520	Eptatretus_burgeri
ENSMICG00000044012	TSEN54	100	83.051	ENSEASG00005000579	TSEN54	100	82.674	Equus_asinus_asinus
ENSMICG00000044012	TSEN54	100	82.863	ENSECAG00000004924	TSEN54	100	82.486	Equus_caballus
ENSMICG00000044012	TSEN54	85	78.118	ENSEEUG00000008467	TSEN54	100	78.118	Erinaceus_europaeus
ENSMICG00000044012	TSEN54	97	44.045	ENSELUG00000017703	tsen54	90	43.478	Esox_lucius
ENSMICG00000044012	TSEN54	99	85.227	ENSFCAG00000023712	TSEN54	99	85.227	Felis_catus
ENSMICG00000044012	TSEN54	94	53.831	ENSFALG00000001119	TSEN54	99	52.642	Ficedula_albicollis
ENSMICG00000044012	TSEN54	85	82.080	ENSFDAG00000019090	TSEN54	99	81.195	Fukomys_damarensis
ENSMICG00000044012	TSEN54	96	49.400	ENSFHEG00000005470	tsen54	96	49.400	Fundulus_heteroclitus
ENSMICG00000044012	TSEN54	83	44.103	ENSGMOG00000013146	tsen54	82	46.429	Gadus_morhua
ENSMICG00000044012	TSEN54	93	51.308	ENSGALG00000047163	TSEN54	97	50.905	Gallus_gallus
ENSMICG00000044012	TSEN54	99	48.263	ENSGAFG00000005111	tsen54	99	47.776	Gambusia_affinis
ENSMICG00000044012	TSEN54	96	46.032	ENSGACG00000014987	tsen54	99	45.618	Gasterosteus_aculeatus
ENSMICG00000044012	TSEN54	100	56.449	ENSGAGG00000006825	TSEN54	99	56.262	Gopherus_agassizii
ENSMICG00000044012	TSEN54	96	84.055	ENSGGOG00000009417	TSEN54	100	85.630	Gorilla_gorilla
ENSMICG00000044012	TSEN54	87	45.934	ENSHBUG00000018296	tsen54	99	39.524	Haplochromis_burtoni
ENSMICG00000044012	TSEN54	100	82.700	ENSHGLG00000007979	TSEN54	100	81.939	Heterocephalus_glaber_female
ENSMICG00000044012	TSEN54	100	81.749	ENSHGLG00100005497	TSEN54	100	80.989	Heterocephalus_glaber_male
ENSMICG00000044012	TSEN54	80	44.076	ENSHCOG00000007481	tsen54	99	42.482	Hippocampus_comes
ENSMICG00000044012	TSEN54	99	43.133	ENSIPUG00000000590	tsen54	79	60.119	Ictalurus_punctatus
ENSMICG00000044012	TSEN54	100	79.087	ENSSTOG00000012883	TSEN54	100	78.327	Ictidomys_tridecemlineatus
ENSMICG00000044012	TSEN54	100	80.682	ENSJJAG00000007365	Tsen54	100	80.303	Jaculus_jaculus
ENSMICG00000044012	TSEN54	96	46.449	ENSKMAG00000006944	tsen54	97	45.841	Kryptolebias_marmoratus
ENSMICG00000044012	TSEN54	96	45.117	ENSLBEG00000004199	tsen54	97	43.212	Labrus_bergylta
ENSMICG00000044012	TSEN54	97	47.784	ENSLACG00000009497	TSEN54	100	46.923	Latimeria_chalumnae
ENSMICG00000044012	TSEN54	97	47.297	ENSLOCG00000011191	tsen54	75	68.235	Lepisosteus_oculatus
ENSMICG00000044012	TSEN54	100	77.799	ENSLAFG00000011655	TSEN54	100	77.799	Loxodonta_africana
ENSMICG00000044012	TSEN54	100	85.361	ENSMFAG00000000712	TSEN54	100	85.551	Macaca_fascicularis
ENSMICG00000044012	TSEN54	100	85.171	ENSMNEG00000029199	TSEN54	100	85.361	Macaca_nemestrina
ENSMICG00000044012	TSEN54	85	84.292	ENSMLEG00000044168	TSEN54	88	84.513	Mandrillus_leucophaeus
ENSMICG00000044012	TSEN54	98	44.961	ENSMAMG00000019773	tsen54	98	43.750	Mastacembelus_armatus
ENSMICG00000044012	TSEN54	96	47.525	ENSMZEG00005000884	tsen54	96	46.351	Maylandia_zebra
ENSMICG00000044012	TSEN54	97	50.864	ENSMGAG00000009556	TSEN54	97	50.867	Meleagris_gallopavo
ENSMICG00000044012	TSEN54	100	79.238	ENSMAUG00000016838	Tsen54	100	78.667	Mesocricetus_auratus
ENSMICG00000044012	TSEN54	100	80.190	ENSMOCG00000021585	Tsen54	100	79.429	Microtus_ochrogaster
ENSMICG00000044012	TSEN54	95	46.436	ENSMMOG00000020189	tsen54	98	45.825	Mola_mola
ENSMICG00000044012	TSEN54	98	66.415	ENSMODG00000007438	TSEN54	98	66.605	Monodelphis_domestica
ENSMICG00000044012	TSEN54	96	46.380	ENSMALG00000020573	tsen54	97	44.990	Monopterus_albus
ENSMICG00000044012	TSEN54	100	79.087	MGP_CAROLIEiJ_G0017417	Tsen54	100	78.327	Mus_caroli
ENSMICG00000044012	TSEN54	100	79.087	ENSMUSG00000020781	Tsen54	100	78.327	Mus_musculus
ENSMICG00000044012	TSEN54	100	78.707	MGP_PahariEiJ_G0018547	Tsen54	100	77.947	Mus_pahari
ENSMICG00000044012	TSEN54	100	79.087	MGP_SPRETEiJ_G0018262	Tsen54	100	78.327	Mus_spretus
ENSMICG00000044012	TSEN54	100	83.616	ENSMPUG00000013870	TSEN54	100	83.616	Mustela_putorius_furo
ENSMICG00000044012	TSEN54	100	83.591	ENSMLUG00000015298	TSEN54	100	83.591	Myotis_lucifugus
ENSMICG00000044012	TSEN54	100	80.608	ENSNGAG00000015673	Tsen54	100	79.848	Nannospalax_galili
ENSMICG00000044012	TSEN54	88	64.668	ENSMEUG00000011908	TSEN54	100	64.668	Notamacropus_eugenii
ENSMICG00000044012	TSEN54	100	75.432	ENSOPRG00000012513	TSEN54	100	75.432	Ochotona_princeps
ENSMICG00000044012	TSEN54	96	48.221	ENSONIG00000009543	tsen54	96	47.036	Oreochromis_niloticus
ENSMICG00000044012	TSEN54	99	75.985	ENSOCUG00000009875	TSEN54	99	75.985	Oryctolagus_cuniculus
ENSMICG00000044012	TSEN54	96	46.573	ENSORLG00000000852	tsen54	97	45.968	Oryzias_latipes
ENSMICG00000044012	TSEN54	96	47.379	ENSORLG00020018221	tsen54	97	46.774	Oryzias_latipes_hni
ENSMICG00000044012	TSEN54	96	46.586	ENSORLG00015009413	tsen54	98	46.371	Oryzias_latipes_hsok
ENSMICG00000044012	TSEN54	96	47.686	ENSOMEG00000014402	tsen54	94	46.693	Oryzias_melastigma
ENSMICG00000044012	TSEN54	100	81.179	ENSOGAG00000001442	TSEN54	100	81.179	Otolemur_garnettii
ENSMICG00000044012	TSEN54	85	79.913	ENSOARG00000010361	TSEN54	100	79.476	Ovis_aries
ENSMICG00000044012	TSEN54	94	82.863	ENSPPAG00000043519	TSEN54	99	84.879	Pan_paniscus
ENSMICG00000044012	TSEN54	99	85.227	ENSPPRG00000009162	TSEN54	99	85.227	Panthera_pardus
ENSMICG00000044012	TSEN54	85	83.850	ENSPTIG00000019312	TSEN54	96	83.850	Panthera_tigris_altaica
ENSMICG00000044012	TSEN54	100	84.030	ENSPTRG00000009646	TSEN54	100	85.551	Pan_troglodytes
ENSMICG00000044012	TSEN54	99	85.143	ENSPANG00000020133	TSEN54	99	85.333	Papio_anubis
ENSMICG00000044012	TSEN54	97	47.339	ENSPKIG00000023018	tsen54	100	45.843	Paramormyrops_kingsleyae
ENSMICG00000044012	TSEN54	80	53.864	ENSPSIG00000012807	TSEN54	99	53.396	Pelodiscus_sinensis
ENSMICG00000044012	TSEN54	92	37.448	ENSPMGG00000019578	tsen54	99	36.192	Periophthalmus_magnuspinnatus
ENSMICG00000044012	TSEN54	100	80.381	ENSPEMG00000014857	Tsen54	100	79.619	Peromyscus_maniculatus_bairdii
ENSMICG00000044012	TSEN54	99	48.162	ENSPFOG00000022740	tsen54	99	47.784	Poecilia_formosa
ENSMICG00000044012	TSEN54	99	48.444	ENSPLAG00000014847	tsen54	99	48.062	Poecilia_latipinna
ENSMICG00000044012	TSEN54	99	48.249	ENSPMEG00000022876	tsen54	99	47.868	Poecilia_mexicana
ENSMICG00000044012	TSEN54	99	48.362	ENSPREG00000013090	tsen54	99	48.362	Poecilia_reticulata
ENSMICG00000044012	TSEN54	91	81.075	ENSPPYG00000008629	TSEN54	100	81.290	Pongo_abelii
ENSMICG00000044012	TSEN54	95	72.056	ENSPCAG00000002093	TSEN54	99	72.056	Procavia_capensis
ENSMICG00000044012	TSEN54	99	93.117	ENSPCOG00000027880	TSEN54	99	93.117	Propithecus_coquereli
ENSMICG00000044012	TSEN54	100	84.746	ENSPVAG00000008446	TSEN54	100	84.746	Pteropus_vampyrus
ENSMICG00000044012	TSEN54	92	46.311	ENSPNYG00000010217	tsen54	99	45.979	Pundamilia_nyererei
ENSMICG00000044012	TSEN54	97	47.741	ENSPNAG00000003770	tsen54	97	47.544	Pygocentrus_nattereri
ENSMICG00000044012	TSEN54	100	79.848	ENSRNOG00000004598	Tsen54	100	79.087	Rattus_norvegicus
ENSMICG00000044012	TSEN54	100	84.981	ENSRBIG00000043040	TSEN54	100	85.171	Rhinopithecus_bieti
ENSMICG00000044012	TSEN54	100	84.601	ENSRROG00000030797	TSEN54	100	84.791	Rhinopithecus_roxellana
ENSMICG00000044012	TSEN54	99	81.714	ENSSBOG00000013543	TSEN54	99	81.905	Saimiri_boliviensis_boliviensis
ENSMICG00000044012	TSEN54	99	65.672	ENSSHAG00000018127	TSEN54	98	65.672	Sarcophilus_harrisii
ENSMICG00000044012	TSEN54	80	46.963	ENSSFOG00015004093	tsen54	100	45.775	Scleropages_formosus
ENSMICG00000044012	TSEN54	97	45.000	ENSSMAG00000012449	tsen54	99	44.101	Scophthalmus_maximus
ENSMICG00000044012	TSEN54	96	46.821	ENSSDUG00000021506	tsen54	97	45.243	Seriola_dumerili
ENSMICG00000044012	TSEN54	96	46.821	ENSSLDG00000016303	tsen54	97	45.049	Seriola_lalandi_dorsalis
ENSMICG00000044012	TSEN54	78	52.955	ENSSPUG00000008988	TSEN54	100	51.577	Sphenodon_punctatus
ENSMICG00000044012	TSEN54	80	44.203	ENSSPAG00000008047	tsen54	99	43.961	Stegastes_partitus
ENSMICG00000044012	TSEN54	92	47.817	ENSSPAG00000008098	-	99	46.584	Stegastes_partitus
ENSMICG00000044012	TSEN54	100	84.557	ENSSSCG00000036852	TSEN54	100	84.557	Sus_scrofa
ENSMICG00000044012	TSEN54	85	51.549	ENSTGUG00000008548	TSEN54	100	51.549	Taeniopygia_guttata
ENSMICG00000044012	TSEN54	96	47.047	ENSTRUG00000004230	tsen54	96	45.825	Takifugu_rubripes
ENSMICG00000044012	TSEN54	99	45.665	ENSTNIG00000011281	tsen54	99	44.234	Tetraodon_nigroviridis
ENSMICG00000044012	TSEN54	85	82.751	ENSTTRG00000015828	TSEN54	100	82.751	Tursiops_truncatus
ENSMICG00000044012	TSEN54	80	81.860	ENSUAMG00000010045	TSEN54	100	81.860	Ursus_americanus
ENSMICG00000044012	TSEN54	83	82.247	ENSUMAG00000008979	TSEN54	100	82.247	Ursus_maritimus
ENSMICG00000044012	TSEN54	97	83.883	ENSVVUG00000011411	TSEN54	98	83.883	Vulpes_vulpes
ENSMICG00000044012	TSEN54	99	50.965	ENSXETG00000012532	tsen54	99	61.486	Xenopus_tropicalis
ENSMICG00000044012	TSEN54	96	44.869	ENSXCOG00000018245	tsen54	99	45.070	Xiphophorus_couchianus
ENSMICG00000044012	TSEN54	96	49.900	ENSXMAG00000018818	tsen54	96	48.600	Xiphophorus_maculatus