EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000046127 (Gene tree)
Gene ID: 105879605
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 50755 bases
Position: chr8:74106656-74157410
Accession: 105879605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000046425	Rif1_N	PF12231.8	8.3e-76	1	1
ENSMICP00000048228	Rif1_N	PF12231.8	8.5e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000070978	RIF1-202	7623	XM_012779972	ENSMICP00000048228	2477 (aa)	XP_012635426	UPI000643596F
ENSMICT00000069710	RIF1-201	7498	XM_012779975	ENSMICP00000046425	2451 (aa)	XP_012635429	UPI000642DDC1

Gene Model

Click here to download ENSMICG00000046127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000046127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000046127	RIF1	100	84.153	ENSG00000080345	RIF1	97	91.971	Homo_sapiens
ENSMICG00000046127	RIF1	51	48.894	ENSAPOG00000011073	rif1	50	48.081	Acanthochromis_polyacanthus
ENSMICG00000046127	RIF1	99	82.064	ENSAMEG00000008461	RIF1	100	81.983	Ailuropoda_melanoleuca
ENSMICG00000046127	RIF1	63	50.943	ENSACIG00000017765	rif1	63	54.627	Amphilophus_citrinellus
ENSMICG00000046127	RIF1	63	48.850	ENSAOCG00000017231	rif1	63	48.110	Amphiprion_ocellaris
ENSMICG00000046127	RIF1	70	54.545	ENSAPEG00000013228	rif1	62	54.545	Amphiprion_percula
ENSMICG00000046127	RIF1	82	43.373	ENSATEG00000022887	rif1	74	47.266	Anabas_testudineus
ENSMICG00000046127	RIF1	87	59.169	ENSAPLG00000007092	RIF1	95	59.169	Anas_platyrhynchos
ENSMICG00000046127	RIF1	84	57.429	ENSACAG00000003714	RIF1	90	57.429	Anolis_carolinensis
ENSMICG00000046127	RIF1	100	83.743	ENSANAG00000024840	RIF1	100	83.743	Aotus_nancymaae
ENSMICG00000046127	RIF1	51	51.330	ENSAMXG00000010910	rif1	52	51.270	Astyanax_mexicanus
ENSMICG00000046127	RIF1	94	80.909	ENSBTAG00000021020	RIF1	100	80.909	Bos_taurus
ENSMICG00000046127	RIF1	100	82.937	ENSCJAG00000003138	RIF1	100	82.937	Callithrix_jacchus
ENSMICG00000046127	RIF1	100	80.813	ENSCAFG00000005670	RIF1	97	80.893	Canis_familiaris
ENSMICG00000046127	RIF1	100	79.936	ENSCAFG00020016401	RIF1	100	80.016	Canis_lupus_dingo
ENSMICG00000046127	RIF1	100	80.548	ENSCHIG00000020327	RIF1	100	80.548	Capra_hircus
ENSMICG00000046127	RIF1	99	80.774	ENSTSYG00000008861	RIF1	100	80.774	Carlito_syrichta
ENSMICG00000046127	RIF1	80	81.395	ENSCAPG00000008957	RIF1	96	81.395	Cavia_aperea
ENSMICG00000046127	RIF1	99	72.950	ENSCPOG00000037898	RIF1	99	72.870	Cavia_porcellus
ENSMICG00000046127	RIF1	100	82.453	ENSCCAG00000024760	RIF1	100	82.453	Cebus_capucinus
ENSMICG00000046127	RIF1	100	84.113	ENSCATG00000033353	RIF1	100	84.113	Cercocebus_atys
ENSMICG00000046127	RIF1	96	75.595	ENSCLAG00000001517	RIF1	99	75.428	Chinchilla_lanigera
ENSMICG00000046127	RIF1	100	84.113	ENSCSAG00000016089	RIF1	100	84.113	Chlorocebus_sabaeus
ENSMICG00000046127	RIF1	97	76.957	ENSCHOG00000007187	RIF1	97	76.957	Choloepus_hoffmanni
ENSMICG00000046127	RIF1	91	68.557	ENSCPBG00000025885	RIF1	100	62.273	Chrysemys_picta_bellii
ENSMICG00000046127	RIF1	100	82.628	ENSCANG00000028962	RIF1	100	83.488	Colobus_angolensis_palliatus
ENSMICG00000046127	RIF1	99	71.176	ENSCGRG00001024589	Rif1	100	71.216	Cricetulus_griseus_chok1gshd
ENSMICG00000046127	RIF1	99	72.446	ENSCGRG00000010713	Rif1	100	72.446	Cricetulus_griseus_crigri
ENSMICG00000046127	RIF1	61	57.642	ENSCSEG00000003945	rif1	65	57.642	Cynoglossus_semilaevis
ENSMICG00000046127	RIF1	63	48.961	ENSCVAG00000022479	rif1	67	48.961	Cyprinodon_variegatus
ENSMICG00000046127	RIF1	51	51.554	ENSDARG00000062650	rif1	52	51.667	Danio_rerio
ENSMICG00000046127	RIF1	99	78.574	ENSDNOG00000011194	RIF1	97	78.574	Dasypus_novemcinctus
ENSMICG00000046127	RIF1	94	73.051	ENSETEG00000012421	RIF1	92	72.748	Echinops_telfairi
ENSMICG00000046127	RIF1	97	86.737	ENSEASG00005023434	RIF1	98	93.023	Equus_asinus_asinus
ENSMICG00000046127	RIF1	97	91.101	ENSECAG00000012679	RIF1	100	91.101	Equus_caballus
ENSMICG00000046127	RIF1	62	51.672	ENSELUG00000006826	rif1	56	50.718	Esox_lucius
ENSMICG00000046127	RIF1	100	81.529	ENSFCAG00000029742	RIF1	100	81.529	Felis_catus
ENSMICG00000046127	RIF1	79	61.517	ENSFALG00000013874	RIF1	99	51.436	Ficedula_albicollis
ENSMICG00000046127	RIF1	99	77.035	ENSFDAG00000006538	RIF1	99	76.914	Fukomys_damarensis
ENSMICG00000046127	RIF1	62	49.559	ENSFHEG00000013721	rif1	61	53.455	Fundulus_heteroclitus
ENSMICG00000046127	RIF1	54	51.261	ENSGMOG00000003517	rif1	81	51.261	Gadus_morhua
ENSMICG00000046127	RIF1	79	65.306	ENSGALG00000012484	RIF1	91	65.598	Gallus_gallus
ENSMICG00000046127	RIF1	70	50.356	ENSGAFG00000017196	rif1	75	54.661	Gambusia_affinis
ENSMICG00000046127	RIF1	60	54.878	ENSGACG00000008579	rif1	59	54.400	Gasterosteus_aculeatus
ENSMICG00000046127	RIF1	89	72.455	ENSGAGG00000012595	RIF1	98	73.574	Gopherus_agassizii
ENSMICG00000046127	RIF1	90	92.418	ENSGGOG00000040178	RIF1	96	92.418	Gorilla_gorilla
ENSMICG00000046127	RIF1	63	45.249	ENSHBUG00000007125	rif1	55	51.087	Haplochromis_burtoni
ENSMICG00000046127	RIF1	95	77.551	ENSHGLG00100009807	RIF1	99	77.381	Heterocephalus_glaber_male
ENSMICG00000046127	RIF1	63	49.800	ENSHCOG00000015943	rif1	60	49.446	Hippocampus_comes
ENSMICG00000046127	RIF1	50	53.312	ENSIPUG00000021703	rif1	50	52.423	Ictalurus_punctatus
ENSMICG00000046127	RIF1	100	79.399	ENSSTOG00000020712	RIF1	100	79.479	Ictidomys_tridecemlineatus
ENSMICG00000046127	RIF1	99	70.825	ENSJJAG00000023000	Rif1	100	70.825	Jaculus_jaculus
ENSMICG00000046127	RIF1	63	50.159	ENSKMAG00000002852	rif1	67	50.080	Kryptolebias_marmoratus
ENSMICG00000046127	RIF1	63	50.869	ENSLBEG00000023196	rif1	59	50.790	Labrus_bergylta
ENSMICG00000046127	RIF1	85	62.985	ENSLACG00000005425	RIF1	89	62.985	Latimeria_chalumnae
ENSMICG00000046127	RIF1	62	54.924	ENSLOCG00000002657	rif1	84	51.935	Lepisosteus_oculatus
ENSMICG00000046127	RIF1	99	79.460	ENSLAFG00000009796	RIF1	100	79.460	Loxodonta_africana
ENSMICG00000046127	RIF1	100	84.274	ENSMFAG00000032233	RIF1	100	84.274	Macaca_fascicularis
ENSMICG00000046127	RIF1	100	84.153	ENSMMUG00000008611	RIF1	100	84.153	Macaca_mulatta
ENSMICG00000046127	RIF1	100	84.153	ENSMNEG00000031616	RIF1	100	84.153	Macaca_nemestrina
ENSMICG00000046127	RIF1	100	84.274	ENSMLEG00000042945	RIF1	100	84.274	Mandrillus_leucophaeus
ENSMICG00000046127	RIF1	57	53.267	ENSMAMG00000001745	rif1	60	53.539	Mastacembelus_armatus
ENSMICG00000046127	RIF1	64	50.343	ENSMZEG00005020920	rif1	71	50.420	Maylandia_zebra
ENSMICG00000046127	RIF1	85	57.576	ENSMGAG00000012732	RIF1	93	57.828	Meleagris_gallopavo
ENSMICG00000046127	RIF1	98	89.136	ENSMAUG00000013158	Rif1	100	89.136	Mesocricetus_auratus
ENSMICG00000046127	RIF1	99	71.055	ENSMOCG00000009381	Rif1	100	71.135	Microtus_ochrogaster
ENSMICG00000046127	RIF1	62	50.162	ENSMMOG00000006519	rif1	63	50.162	Mola_mola
ENSMICG00000046127	RIF1	100	60.821	ENSMODG00000003703	RIF1	100	60.741	Monodelphis_domestica
ENSMICG00000046127	RIF1	58	52.536	ENSMALG00000016759	rif1	66	52.717	Monopterus_albus
ENSMICG00000046127	RIF1	99	70.262	MGP_CAROLIEiJ_G0023555	Rif1	100	70.262	Mus_caroli
ENSMICG00000046127	RIF1	99	70.517	ENSMUSG00000036202	Rif1	100	70.517	Mus_musculus
ENSMICG00000046127	RIF1	99	69.283	MGP_PahariEiJ_G0025006	Rif1	100	69.283	Mus_pahari
ENSMICG00000046127	RIF1	99	70.704	MGP_SPRETEiJ_G0024476	Rif1	100	70.704	Mus_spretus
ENSMICG00000046127	RIF1	100	81.192	ENSMPUG00000000371	RIF1	100	81.192	Mustela_putorius_furo
ENSMICG00000046127	RIF1	90	78.879	ENSMLUG00000003376	RIF1	100	78.879	Myotis_lucifugus
ENSMICG00000046127	RIF1	100	74.346	ENSNGAG00000009268	Rif1	100	74.346	Nannospalax_galili
ENSMICG00000046127	RIF1	73	51.163	ENSNBRG00000014257	rif1	83	49.017	Neolamprologus_brichardi
ENSMICG00000046127	RIF1	100	83.489	ENSNLEG00000010955	RIF1	100	83.658	Nomascus_leucogenys
ENSMICG00000046127	RIF1	77	80.000	ENSMEUG00000007601	-	83	80.000	Notamacropus_eugenii
ENSMICG00000046127	RIF1	99	73.834	ENSODEG00000003950	RIF1	99	73.834	Octodon_degus
ENSMICG00000046127	RIF1	54	60.465	ENSONIG00000013657	rif1	62	60.465	Oreochromis_niloticus
ENSMICG00000046127	RIF1	84	68.613	ENSOANG00000006078	-	56	75.259	Ornithorhynchus_anatinus
ENSMICG00000046127	RIF1	100	78.848	ENSOCUG00000017435	RIF1	100	78.678	Oryctolagus_cuniculus
ENSMICG00000046127	RIF1	62	48.169	ENSORLG00020001302	rif1	67	48.562	Oryzias_latipes_hni
ENSMICG00000046127	RIF1	68	48.408	ENSORLG00015000009	rif1	76	48.408	Oryzias_latipes_hsok
ENSMICG00000046127	RIF1	61	49.278	ENSOMEG00000021513	rif1	66	48.924	Oryzias_melastigma
ENSMICG00000046127	RIF1	99	85.069	ENSOGAG00000006141	RIF1	99	84.948	Otolemur_garnettii
ENSMICG00000046127	RIF1	100	80.830	ENSOARG00000008930	RIF1	100	80.830	Ovis_aries
ENSMICG00000046127	RIF1	100	84.442	ENSPPAG00000023754	RIF1	100	84.442	Pan_paniscus
ENSMICG00000046127	RIF1	100	81.449	ENSPPRG00000003618	RIF1	100	81.449	Panthera_pardus
ENSMICG00000046127	RIF1	100	81.489	ENSPTIG00000020652	RIF1	100	81.489	Panthera_tigris_altaica
ENSMICG00000046127	RIF1	100	84.522	ENSPTRG00000012534	RIF1	100	84.522	Pan_troglodytes
ENSMICG00000046127	RIF1	100	83.992	ENSPANG00000008525	RIF1	100	83.992	Papio_anubis
ENSMICG00000046127	RIF1	62	52.423	ENSPKIG00000004267	rif1	67	52.446	Paramormyrops_kingsleyae
ENSMICG00000046127	RIF1	65	45.476	ENSPMGG00000016141	rif1	88	44.314	Periophthalmus_magnuspinnatus
ENSMICG00000046127	RIF1	99	73.184	ENSPEMG00000000446	Rif1	99	73.184	Peromyscus_maniculatus_bairdii
ENSMICG00000046127	RIF1	57	51.202	ENSPFOG00000000554	-	72	51.689	Poecilia_formosa
ENSMICG00000046127	RIF1	63	51.206	ENSPFOG00000017804	rif1	75	50.778	Poecilia_formosa
ENSMICG00000046127	RIF1	66	48.311	ENSPLAG00000017945	rif1	77	50.826	Poecilia_latipinna
ENSMICG00000046127	RIF1	52	50.588	ENSPMEG00000006897	-	70	50.000	Poecilia_mexicana
ENSMICG00000046127	RIF1	66	50.708	ENSPREG00000018052	rif1	72	54.809	Poecilia_reticulata
ENSMICG00000046127	RIF1	100	84.315	ENSPPYG00000012846	RIF1	100	84.482	Pongo_abelii
ENSMICG00000046127	RIF1	83	86.275	ENSPCAG00000009032	RIF1	83	86.275	Procavia_capensis
ENSMICG00000046127	RIF1	100	94.512	ENSPCOG00000027888	RIF1	100	94.512	Propithecus_coquereli
ENSMICG00000046127	RIF1	93	88.462	ENSPVAG00000014276	RIF1	95	88.462	Pteropus_vampyrus
ENSMICG00000046127	RIF1	64	48.626	ENSPNYG00000012940	rif1	70	48.439	Pundamilia_nyererei
ENSMICG00000046127	RIF1	51	52.381	ENSPNAG00000016685	rif1	52	52.006	Pygocentrus_nattereri
ENSMICG00000046127	RIF1	99	69.530	ENSRNOG00000054901	Rif1	100	69.490	Rattus_norvegicus
ENSMICG00000046127	RIF1	100	83.266	ENSRBIG00000003704	RIF1	100	83.434	Rhinopithecus_bieti
ENSMICG00000046127	RIF1	100	84.113	ENSRROG00000028206	RIF1	100	84.281	Rhinopithecus_roxellana
ENSMICG00000046127	RIF1	97	95.699	ENSSBOG00000029530	RIF1	100	95.699	Saimiri_boliviensis_boliviensis
ENSMICG00000046127	RIF1	99	60.465	ENSSHAG00000018552	RIF1	100	59.468	Sarcophilus_harrisii
ENSMICG00000046127	RIF1	65	52.160	ENSSFOG00015021539	rif1	75	50.514	Scleropages_formosus
ENSMICG00000046127	RIF1	65	48.541	ENSSMAG00000011704	rif1	63	48.273	Scophthalmus_maximus
ENSMICG00000046127	RIF1	62	51.294	ENSSDUG00000015632	rif1	71	48.788	Seriola_dumerili
ENSMICG00000046127	RIF1	61	86.780	ENSSARG00000007161	-	62	86.780	Sorex_araneus
ENSMICG00000046127	RIF1	86	60.839	ENSSPUG00000003062	RIF1	94	60.839	Sphenodon_punctatus
ENSMICG00000046127	RIF1	100	81.467	ENSSSCG00000016395	RIF1	100	81.467	Sus_scrofa
ENSMICG00000046127	RIF1	64	49.960	ENSTRUG00000015808	rif1	70	48.991	Takifugu_rubripes
ENSMICG00000046127	RIF1	64	51.057	ENSTNIG00000011538	rif1	68	51.057	Tetraodon_nigroviridis
ENSMICG00000046127	RIF1	83	91.139	ENSTBEG00000016082	RIF1	82	91.139	Tupaia_belangeri
ENSMICG00000046127	RIF1	100	82.696	ENSTTRG00000011190	RIF1	100	82.696	Tursiops_truncatus
ENSMICG00000046127	RIF1	86	88.535	ENSUAMG00000026385	RIF1	98	88.535	Ursus_americanus
ENSMICG00000046127	RIF1	100	82.166	ENSUMAG00000000337	RIF1	100	82.085	Ursus_maritimus
ENSMICG00000046127	RIF1	100	80.226	ENSVPAG00000002162	RIF1	100	80.387	Vicugna_pacos
ENSMICG00000046127	RIF1	100	80.338	ENSVVUG00000011293	RIF1	100	80.338	Vulpes_vulpes
ENSMICG00000046127	RIF1	83	63.722	ENSXETG00000004530	rif1	69	46.284	Xenopus_tropicalis
ENSMICG00000046127	RIF1	63	48.523	ENSXMAG00000000506	rif1	75	48.370	Xiphophorus_maculatus