EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000047411 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 4207 bases
Position: chr18:44684321-44688527
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000046703	LSM	PF01423.22	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000061825	-	258	-	ENSMICP00000046703	85 (aa)	-	UPI000C2EA95F

Gene Model

Click here to download ENSMICG00000047411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000047411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000047411	-	92	91.026	ENSMICG00000042599	LSM6	98	91.026
ENSMICG00000047411	-	75	43.750	ENSMICG00000030494	-	51	43.750
ENSMICG00000047411	-	78	46.970	ENSMICG00000012153	-	76	47.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000047411	-	92	91.026	ENSG00000164167	LSM6	98	91.026	Homo_sapiens
ENSMICG00000047411	-	92	88.462	ENSAPOG00000019832	lsm6	98	88.462	Acanthochromis_polyacanthus
ENSMICG00000047411	-	92	91.026	ENSAMEG00000016671	LSM6	98	91.026	Ailuropoda_melanoleuca
ENSMICG00000047411	-	92	88.462	ENSACIG00000016711	lsm6	98	88.462	Amphilophus_citrinellus
ENSMICG00000047411	-	92	88.462	ENSAOCG00000002110	lsm6	50	88.462	Amphiprion_ocellaris
ENSMICG00000047411	-	92	88.462	ENSAPEG00000023992	lsm6	98	88.462	Amphiprion_percula
ENSMICG00000047411	-	92	88.462	ENSATEG00000012610	lsm6	98	88.462	Anabas_testudineus
ENSMICG00000047411	-	88	90.667	ENSAPLG00000012594	LSM6	96	90.667	Anas_platyrhynchos
ENSMICG00000047411	-	92	91.026	ENSACAG00000004004	LSM6	98	91.026	Anolis_carolinensis
ENSMICG00000047411	-	76	90.769	ENSANAG00000021839	-	87	90.769	Aotus_nancymaae
ENSMICG00000047411	-	92	91.026	ENSANAG00000030568	-	98	91.026	Aotus_nancymaae
ENSMICG00000047411	-	92	88.462	ENSACLG00000025621	lsm6	98	88.462	Astatotilapia_calliptera
ENSMICG00000047411	-	92	88.462	ENSAMXG00000038738	lsm6	98	88.462	Astyanax_mexicanus
ENSMICG00000047411	-	92	91.026	ENSBTAG00000014060	LSM6	98	91.026	Bos_taurus
ENSMICG00000047411	-	92	87.179	ENSBTAG00000052085	-	98	87.179	Bos_taurus
ENSMICG00000047411	-	88	76.000	WBGene00003080	lsm-6	97	76.000	Caenorhabditis_elegans
ENSMICG00000047411	-	92	91.026	ENSCJAG00000002482	LSM6	98	91.026	Callithrix_jacchus
ENSMICG00000047411	-	92	91.026	ENSCAFG00000007738	LSM6	98	91.026	Canis_familiaris
ENSMICG00000047411	-	92	91.026	ENSCAFG00020025902	LSM6	98	91.026	Canis_lupus_dingo
ENSMICG00000047411	-	84	98.592	ENSCHIG00000012864	-	100	98.592	Capra_hircus
ENSMICG00000047411	-	92	74.359	ENSCHIG00000024198	-	92	74.359	Capra_hircus
ENSMICG00000047411	-	92	91.026	ENSCHIG00000010334	-	98	91.026	Capra_hircus
ENSMICG00000047411	-	92	91.026	ENSTSYG00000026972	LSM6	98	91.026	Carlito_syrichta
ENSMICG00000047411	-	81	85.507	ENSTSYG00000012759	-	91	85.507	Carlito_syrichta
ENSMICG00000047411	-	76	96.923	ENSCAPG00000011179	-	100	96.923	Cavia_aperea
ENSMICG00000047411	-	92	91.026	ENSCAPG00000008104	LSM6	98	91.026	Cavia_aperea
ENSMICG00000047411	-	92	91.026	ENSCPOG00000032655	LSM6	98	91.026	Cavia_porcellus
ENSMICG00000047411	-	92	89.744	ENSCCAG00000020665	-	98	89.744	Cebus_capucinus
ENSMICG00000047411	-	92	91.026	ENSCCAG00000036437	LSM6	98	91.026	Cebus_capucinus
ENSMICG00000047411	-	92	91.026	ENSCATG00000002770	-	98	91.026	Cercocebus_atys
ENSMICG00000047411	-	72	83.607	ENSCATG00000038799	-	80	83.607	Cercocebus_atys
ENSMICG00000047411	-	84	81.690	ENSCLAG00000005685	-	100	81.690	Chinchilla_lanigera
ENSMICG00000047411	-	92	91.026	ENSCLAG00000005495	LSM6	98	91.026	Chinchilla_lanigera
ENSMICG00000047411	-	92	91.026	ENSCSAG00000003421	LSM6	98	91.026	Chlorocebus_sabaeus
ENSMICG00000047411	-	62	100.000	ENSCHOG00000003420	LSM6	84	100.000	Choloepus_hoffmanni
ENSMICG00000047411	-	92	91.026	ENSCPBG00000027472	LSM6	82	91.026	Chrysemys_picta_bellii
ENSMICG00000047411	-	88	88.000	ENSCING00000019152	-	91	88.000	Ciona_intestinalis
ENSMICG00000047411	-	88	89.333	ENSCSAVG00000002065	-	91	89.333	Ciona_savignyi
ENSMICG00000047411	-	92	91.026	ENSCANG00000041263	-	98	91.026	Colobus_angolensis_palliatus
ENSMICG00000047411	-	72	81.967	ENSCANG00000035214	-	80	81.967	Colobus_angolensis_palliatus
ENSMICG00000047411	-	92	91.026	ENSCANG00000006849	-	98	91.026	Colobus_angolensis_palliatus
ENSMICG00000047411	-	92	91.026	ENSCGRG00001017142	Lsm6	98	91.026	Cricetulus_griseus_chok1gshd
ENSMICG00000047411	-	92	91.026	ENSCGRG00000008320	Lsm6	98	91.026	Cricetulus_griseus_crigri
ENSMICG00000047411	-	92	88.462	ENSCSEG00000000423	lsm6	98	88.462	Cynoglossus_semilaevis
ENSMICG00000047411	-	92	88.462	ENSCVAG00000001592	lsm6	98	88.462	Cyprinodon_variegatus
ENSMICG00000047411	-	92	88.462	ENSDARG00000036995	lsm6	98	88.462	Danio_rerio
ENSMICG00000047411	-	81	98.551	ENSDNOG00000040186	-	74	98.551	Dasypus_novemcinctus
ENSMICG00000047411	-	92	89.744	ENSDNOG00000044848	-	98	89.744	Dasypus_novemcinctus
ENSMICG00000047411	-	92	91.026	ENSDORG00000000933	Lsm6	98	91.026	Dipodomys_ordii
ENSMICG00000047411	-	88	77.333	FBgn0034564	CG9344	95	77.333	Drosophila_melanogaster
ENSMICG00000047411	-	54	84.783	ENSETEG00000013098	LSM6	96	84.783	Echinops_telfairi
ENSMICG00000047411	-	92	91.026	ENSEBUG00000017073	lsm6	98	91.026	Eptatretus_burgeri
ENSMICG00000047411	-	81	98.551	ENSEASG00005001533	LSM6	72	98.551	Equus_asinus_asinus
ENSMICG00000047411	-	92	91.026	ENSECAG00000021036	LSM6	98	91.026	Equus_caballus
ENSMICG00000047411	-	91	62.338	ENSEEUG00000002101	LSM6	97	62.338	Erinaceus_europaeus
ENSMICG00000047411	-	92	88.462	ENSELUG00000014301	LSM6	98	88.462	Esox_lucius
ENSMICG00000047411	-	92	91.026	ENSFCAG00000003047	LSM6	98	91.026	Felis_catus
ENSMICG00000047411	-	92	91.026	ENSFALG00000005509	LSM6	90	91.026	Ficedula_albicollis
ENSMICG00000047411	-	92	82.051	ENSFDAG00000019073	-	98	82.051	Fukomys_damarensis
ENSMICG00000047411	-	92	91.026	ENSFDAG00000020913	-	98	91.026	Fukomys_damarensis
ENSMICG00000047411	-	92	88.462	ENSFHEG00000007948	lsm6	92	95.652	Fundulus_heteroclitus
ENSMICG00000047411	-	92	88.462	ENSGMOG00000015550	lsm6	98	88.462	Gadus_morhua
ENSMICG00000047411	-	92	91.026	ENSGALG00000009985	LSM6	98	91.026	Gallus_gallus
ENSMICG00000047411	-	92	88.462	ENSGAFG00000017763	lsm6	98	88.462	Gambusia_affinis
ENSMICG00000047411	-	92	88.462	ENSGACG00000017223	lsm6	98	88.462	Gasterosteus_aculeatus
ENSMICG00000047411	-	92	91.026	ENSGAGG00000020980	LSM6	98	91.026	Gopherus_agassizii
ENSMICG00000047411	-	92	91.026	ENSGGOG00000001310	LSM6	98	91.026	Gorilla_gorilla
ENSMICG00000047411	-	92	88.462	ENSHBUG00000008618	lsm6	98	88.462	Haplochromis_burtoni
ENSMICG00000047411	-	92	91.026	ENSHGLG00000000205	LSM6	98	91.026	Heterocephalus_glaber_female
ENSMICG00000047411	-	92	91.026	ENSHGLG00100014341	LSM6	98	91.026	Heterocephalus_glaber_male
ENSMICG00000047411	-	92	88.462	ENSHCOG00000005591	lsm6	98	88.462	Hippocampus_comes
ENSMICG00000047411	-	92	87.179	ENSIPUG00000004508	lsm6	98	87.179	Ictalurus_punctatus
ENSMICG00000047411	-	92	91.026	ENSSTOG00000002678	LSM6	98	91.026	Ictidomys_tridecemlineatus
ENSMICG00000047411	-	92	80.769	ENSJJAG00000011211	-	98	80.769	Jaculus_jaculus
ENSMICG00000047411	-	92	91.026	ENSJJAG00000013845	-	98	91.026	Jaculus_jaculus
ENSMICG00000047411	-	88	70.667	ENSJJAG00000016942	-	95	70.667	Jaculus_jaculus
ENSMICG00000047411	-	92	88.462	ENSKMAG00000004105	lsm6	98	88.462	Kryptolebias_marmoratus
ENSMICG00000047411	-	92	88.462	ENSLBEG00000018441	lsm6	98	88.462	Labrus_bergylta
ENSMICG00000047411	-	92	91.026	ENSLACG00000006937	LSM6	98	91.026	Latimeria_chalumnae
ENSMICG00000047411	-	92	88.462	ENSLOCG00000008852	lsm6	98	88.462	Lepisosteus_oculatus
ENSMICG00000047411	-	92	87.179	ENSLOCG00000017683	-	98	87.179	Lepisosteus_oculatus
ENSMICG00000047411	-	92	91.026	ENSLAFG00000001952	LSM6	98	91.026	Loxodonta_africana
ENSMICG00000047411	-	92	91.026	ENSMFAG00000033073	LSM6	98	91.026	Macaca_fascicularis
ENSMICG00000047411	-	72	85.246	ENSMNEG00000040412	-	80	85.246	Macaca_nemestrina
ENSMICG00000047411	-	92	91.026	ENSMNEG00000034820	-	98	91.026	Macaca_nemestrina
ENSMICG00000047411	-	92	91.026	ENSMLEG00000035153	LSM6	98	91.026	Mandrillus_leucophaeus
ENSMICG00000047411	-	92	88.462	ENSMAMG00000014029	lsm6	98	88.462	Mastacembelus_armatus
ENSMICG00000047411	-	92	88.462	ENSMZEG00005009146	lsm6	98	88.462	Maylandia_zebra
ENSMICG00000047411	-	92	91.026	ENSMGAG00000003802	LSM6	98	91.026	Meleagris_gallopavo
ENSMICG00000047411	-	92	91.026	ENSMAUG00000014938	Lsm6	98	91.026	Mesocricetus_auratus
ENSMICG00000047411	-	92	91.026	ENSMOCG00000020049	Lsm6	98	91.026	Microtus_ochrogaster
ENSMICG00000047411	-	93	84.810	ENSMMOG00000007379	-	100	84.810	Mola_mola
ENSMICG00000047411	-	92	88.462	ENSMMOG00000005470	lsm6	98	88.462	Mola_mola
ENSMICG00000047411	-	92	91.026	ENSMODG00000000526	LSM6	98	91.026	Monodelphis_domestica
ENSMICG00000047411	-	92	88.462	ENSMALG00000002419	lsm6	98	88.462	Monopterus_albus
ENSMICG00000047411	-	92	91.026	MGP_CAROLIEiJ_G0031245	Lsm6	98	91.026	Mus_caroli
ENSMICG00000047411	-	92	91.026	ENSMUSG00000031683	Lsm6	98	91.026	Mus_musculus
ENSMICG00000047411	-	92	91.026	MGP_PahariEiJ_G0022851	Lsm6	98	91.026	Mus_pahari
ENSMICG00000047411	-	92	91.026	MGP_SPRETEiJ_G0032365	Lsm6	98	91.026	Mus_spretus
ENSMICG00000047411	-	92	91.026	ENSMPUG00000006936	LSM6	91	91.026	Mustela_putorius_furo
ENSMICG00000047411	-	92	91.026	ENSMLUG00000026355	LSM6	98	91.026	Myotis_lucifugus
ENSMICG00000047411	-	92	91.026	ENSNGAG00000019116	Lsm6	98	91.026	Nannospalax_galili
ENSMICG00000047411	-	92	88.462	ENSNBRG00000004887	lsm6	98	88.462	Neolamprologus_brichardi
ENSMICG00000047411	-	92	91.026	ENSNLEG00000005584	LSM6	98	91.026	Nomascus_leucogenys
ENSMICG00000047411	-	82	98.571	ENSOPRG00000011199	LSM6	89	98.571	Ochotona_princeps
ENSMICG00000047411	-	92	88.462	ENSODEG00000020420	-	98	88.462	Octodon_degus
ENSMICG00000047411	-	91	84.416	ENSODEG00000018684	-	100	84.416	Octodon_degus
ENSMICG00000047411	-	92	89.744	ENSODEG00000002307	-	98	89.744	Octodon_degus
ENSMICG00000047411	-	92	88.462	ENSODEG00000019419	-	98	88.462	Octodon_degus
ENSMICG00000047411	-	92	88.462	ENSONIG00000010005	lsm6	98	88.462	Oreochromis_niloticus
ENSMICG00000047411	-	89	64.474	ENSOANG00000006895	-	97	64.474	Ornithorhynchus_anatinus
ENSMICG00000047411	-	89	64.474	ENSOANG00000006894	-	97	64.474	Ornithorhynchus_anatinus
ENSMICG00000047411	-	92	87.179	ENSORLG00000024158	lsm6	98	87.179	Oryzias_latipes
ENSMICG00000047411	-	92	87.179	ENSORLG00020017383	lsm6	98	87.179	Oryzias_latipes_hni
ENSMICG00000047411	-	92	87.179	ENSORLG00015016903	lsm6	98	87.179	Oryzias_latipes_hsok
ENSMICG00000047411	-	92	88.462	ENSOMEG00000000074	lsm6	98	88.462	Oryzias_melastigma
ENSMICG00000047411	-	92	91.026	ENSOGAG00000033153	-	98	91.026	Otolemur_garnettii
ENSMICG00000047411	-	92	91.026	ENSOGAG00000026665	-	98	91.026	Otolemur_garnettii
ENSMICG00000047411	-	81	98.551	ENSOARG00000008509	-	88	98.551	Ovis_aries
ENSMICG00000047411	-	92	84.615	ENSOARG00000011641	-	91	84.615	Ovis_aries
ENSMICG00000047411	-	92	91.026	ENSPPAG00000037929	LSM6	98	91.026	Pan_paniscus
ENSMICG00000047411	-	92	91.026	ENSPPRG00000012806	LSM6	98	91.026	Panthera_pardus
ENSMICG00000047411	-	92	91.026	ENSPTIG00000019769	LSM6	98	91.026	Panthera_tigris_altaica
ENSMICG00000047411	-	92	91.026	ENSPTRG00000016488	LSM6	98	91.026	Pan_troglodytes
ENSMICG00000047411	-	92	91.026	ENSPANG00000006552	LSM6	98	91.026	Papio_anubis
ENSMICG00000047411	-	92	88.462	ENSPKIG00000016176	lsm6	98	88.462	Paramormyrops_kingsleyae
ENSMICG00000047411	-	92	91.026	ENSPSIG00000016942	LSM6	98	91.026	Pelodiscus_sinensis
ENSMICG00000047411	-	92	88.462	ENSPMGG00000018004	lsm6	98	88.462	Periophthalmus_magnuspinnatus
ENSMICG00000047411	-	92	91.026	ENSPEMG00000012410	Lsm6	98	91.026	Peromyscus_maniculatus_bairdii
ENSMICG00000047411	-	92	91.026	ENSPMAG00000006949	lsm6	98	91.026	Petromyzon_marinus
ENSMICG00000047411	-	92	91.026	ENSPCIG00000023469	LSM6	80	98.551	Phascolarctos_cinereus
ENSMICG00000047411	-	92	88.462	ENSPFOG00000008881	lsm6	98	88.462	Poecilia_formosa
ENSMICG00000047411	-	92	88.462	ENSPLAG00000003202	lsm6	98	88.462	Poecilia_latipinna
ENSMICG00000047411	-	92	88.462	ENSPMEG00000004000	lsm6	98	88.462	Poecilia_mexicana
ENSMICG00000047411	-	92	88.462	ENSPREG00000023235	lsm6	98	88.462	Poecilia_reticulata
ENSMICG00000047411	-	92	91.026	ENSPPYG00000015105	LSM6	98	91.026	Pongo_abelii
ENSMICG00000047411	-	92	91.026	ENSPCOG00000013899	LSM6	98	91.026	Propithecus_coquereli
ENSMICG00000047411	-	92	88.462	ENSPNYG00000012614	lsm6	98	88.462	Pundamilia_nyererei
ENSMICG00000047411	-	92	88.462	ENSPNAG00000018779	lsm6	98	88.462	Pygocentrus_nattereri
ENSMICG00000047411	-	92	91.026	ENSRNOG00000049370	LOC100360750	98	91.026	Rattus_norvegicus
ENSMICG00000047411	-	92	91.026	ENSRNOG00000030374	Lsm6	98	91.026	Rattus_norvegicus
ENSMICG00000047411	-	92	91.026	ENSRBIG00000027878	LSM6	98	91.026	Rhinopithecus_bieti
ENSMICG00000047411	-	92	91.026	ENSRROG00000024868	LSM6	98	91.026	Rhinopithecus_roxellana
ENSMICG00000047411	-	89	35.000	YDR378C	-	93	38.750	Saccharomyces_cerevisiae
ENSMICG00000047411	-	92	64.103	ENSSBOG00000028103	-	97	64.103	Saimiri_boliviensis_boliviensis
ENSMICG00000047411	-	92	91.026	ENSSBOG00000021229	-	98	91.026	Saimiri_boliviensis_boliviensis
ENSMICG00000047411	-	92	88.462	ENSSFOG00015016480	lsm6	98	88.462	Scleropages_formosus
ENSMICG00000047411	-	92	88.462	ENSSMAG00000004550	lsm6	98	88.462	Scophthalmus_maximus
ENSMICG00000047411	-	92	88.462	ENSSLDG00000020533	lsm6	81	88.462	Seriola_lalandi_dorsalis
ENSMICG00000047411	-	81	95.652	ENSSLDG00000004136	-	59	95.652	Seriola_lalandi_dorsalis
ENSMICG00000047411	-	54	84.783	ENSSARG00000000689	LSM6	96	84.783	Sorex_araneus
ENSMICG00000047411	-	92	91.026	ENSSPUG00000008657	LSM6	98	91.026	Sphenodon_punctatus
ENSMICG00000047411	-	92	88.462	ENSSPAG00000003246	lsm6	98	88.462	Stegastes_partitus
ENSMICG00000047411	-	92	91.026	ENSSSCG00000035973	LSM6	98	91.026	Sus_scrofa
ENSMICG00000047411	-	92	91.026	ENSTGUG00000002663	LSM6	98	91.026	Taeniopygia_guttata
ENSMICG00000047411	-	92	88.462	ENSTRUG00000023398	lsm6	98	88.462	Takifugu_rubripes
ENSMICG00000047411	-	92	88.462	ENSTNIG00000017725	lsm6	98	88.462	Tetraodon_nigroviridis
ENSMICG00000047411	-	92	91.026	ENSTTRG00000004609	LSM6	98	91.026	Tursiops_truncatus
ENSMICG00000047411	-	100	83.529	ENSUAMG00000014213	LSM6	70	83.529	Ursus_americanus
ENSMICG00000047411	-	100	83.529	ENSUMAG00000015727	LSM6	70	83.529	Ursus_maritimus
ENSMICG00000047411	-	92	91.026	ENSVPAG00000006922	LSM6	98	91.026	Vicugna_pacos
ENSMICG00000047411	-	92	91.026	ENSVVUG00000009254	LSM6	67	91.026	Vulpes_vulpes
ENSMICG00000047411	-	92	91.026	ENSXETG00000023683	lsm6	98	91.026	Xenopus_tropicalis
ENSMICG00000047411	-	92	88.462	ENSXMAG00000009606	lsm6	98	88.462	Xiphophorus_maculatus