EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000048977 (Gene tree)
Gene ID: 105859353
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 345372 bases
Position: chr1:111955730-112301101
Accession: 105859353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000051464	CMS1	PF14617.6	3.5e-33	1	1
ENSMICP00000051016	CMS1	PF14617.6	4.4e-33	1	1
ENSMICP00000051464	DEAD	PF00270.29	6.9e-06	1	1
ENSMICP00000051016	DEAD	PF00270.29	8.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000072327	CMSS1-201	837	XM_012743075	ENSMICP00000051016	278 (aa)	XP_012598529	UPI000643BB27
ENSMICT00000073134	CMSS1-202	783	XM_012743077	ENSMICP00000051464	260 (aa)	XP_012598531	UPI00085B4354

Gene Model

Click here to download ENSMICG00000048977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000048977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000048977	CMSS1	100	91.398	ENSG00000184220	CMSS1	98	95.000	Homo_sapiens
ENSMICG00000048977	CMSS1	78	65.347	ENSAPOG00000010604	cmss1	100	56.349	Acanthochromis_polyacanthus
ENSMICG00000048977	CMSS1	99	89.575	ENSAMEG00000004092	CMSS1	100	89.575	Ailuropoda_melanoleuca
ENSMICG00000048977	CMSS1	78	55.446	ENSACIG00000021854	cmss1	91	51.440	Amphilophus_citrinellus
ENSMICG00000048977	CMSS1	100	53.793	ENSAOCG00000013361	cmss1	100	54.027	Amphiprion_ocellaris
ENSMICG00000048977	CMSS1	100	53.448	ENSAPEG00000005829	cmss1	100	54.181	Amphiprion_percula
ENSMICG00000048977	CMSS1	100	51.877	ENSATEG00000008209	cmss1	100	53.952	Anabas_testudineus
ENSMICG00000048977	CMSS1	88	67.826	ENSAPLG00000010542	CMSS1	100	67.826	Anas_platyrhynchos
ENSMICG00000048977	CMSS1	99	61.303	ENSACAG00000011065	CMSS1	97	60.985	Anolis_carolinensis
ENSMICG00000048977	CMSS1	100	90.714	ENSANAG00000023565	CMSS1	100	90.714	Aotus_nancymaae
ENSMICG00000048977	CMSS1	100	51.546	ENSACLG00000027294	cmss1	100	52.577	Astatotilapia_calliptera
ENSMICG00000048977	CMSS1	100	46.465	ENSAMXG00000002046	cmss1	100	46.465	Astyanax_mexicanus
ENSMICG00000048977	CMSS1	100	88.530	ENSBTAG00000013663	CMSS1	100	88.889	Bos_taurus
ENSMICG00000048977	CMSS1	100	90.714	ENSCJAG00000000610	CMSS1	100	90.714	Callithrix_jacchus
ENSMICG00000048977	CMSS1	99	92.248	ENSCAFG00000009230	CMSS1	93	92.248	Canis_familiaris
ENSMICG00000048977	CMSS1	94	83.265	ENSCAFG00020024156	-	76	83.265	Canis_lupus_dingo
ENSMICG00000048977	CMSS1	98	91.829	ENSCAFG00020009464	-	95	91.506	Canis_lupus_dingo
ENSMICG00000048977	CMSS1	98	88.327	ENSCHIG00000013003	CMSS1	93	88.327	Capra_hircus
ENSMICG00000048977	CMSS1	99	87.938	ENSTSYG00000009266	CMSS1	99	87.938	Carlito_syrichta
ENSMICG00000048977	CMSS1	86	72.489	ENSCAPG00000013584	CMSS1	100	68.376	Cavia_aperea
ENSMICG00000048977	CMSS1	100	86.380	ENSCPOG00000014680	CMSS1	100	86.380	Cavia_porcellus
ENSMICG00000048977	CMSS1	100	91.786	ENSCCAG00000034685	CMSS1	100	91.786	Cebus_capucinus
ENSMICG00000048977	CMSS1	100	91.756	ENSCATG00000031980	CMSS1	100	91.756	Cercocebus_atys
ENSMICG00000048977	CMSS1	88	93.450	ENSCLAG00000011241	CMSS1	98	93.450	Chinchilla_lanigera
ENSMICG00000048977	CMSS1	94	93.061	ENSCSAG00000006024	CMSS1	100	93.061	Chlorocebus_sabaeus
ENSMICG00000048977	CMSS1	100	69.534	ENSCHOG00000012098	CMSS1	100	69.534	Choloepus_hoffmanni
ENSMICG00000048977	CMSS1	75	40.500	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSMICG00000048977	CMSS1	100	91.398	ENSCANG00000031337	CMSS1	100	91.398	Colobus_angolensis_palliatus
ENSMICG00000048977	CMSS1	100	81.295	ENSCGRG00001014305	Cmss1	100	81.295	Cricetulus_griseus_chok1gshd
ENSMICG00000048977	CMSS1	97	84.064	ENSCGRG00000006722	Cmss1	98	84.064	Cricetulus_griseus_crigri
ENSMICG00000048977	CMSS1	100	49.495	ENSCSEG00000004958	cmss1	100	50.825	Cynoglossus_semilaevis
ENSMICG00000048977	CMSS1	100	49.667	ENSCVAG00000005039	cmss1	100	54.110	Cyprinodon_variegatus
ENSMICG00000048977	CMSS1	100	45.946	ENSDARG00000112579	cmss1	100	47.959	Danio_rerio
ENSMICG00000048977	CMSS1	99	86.100	ENSDNOG00000040418	CMSS1	92	86.100	Dasypus_novemcinctus
ENSMICG00000048977	CMSS1	100	87.455	ENSDORG00000010461	Cmss1	100	87.455	Dipodomys_ordii
ENSMICG00000048977	CMSS1	51	50.758	ENSEBUG00000002156	-	96	50.758	Eptatretus_burgeri
ENSMICG00000048977	CMSS1	88	94.298	ENSEASG00005010966	CMSS1	99	93.607	Equus_asinus_asinus
ENSMICG00000048977	CMSS1	98	89.453	ENSECAG00000015662	CMSS1	99	92.478	Equus_caballus
ENSMICG00000048977	CMSS1	100	56.631	ENSEEUG00000007624	-	100	56.272	Erinaceus_europaeus
ENSMICG00000048977	CMSS1	100	50.333	ENSELUG00000019459	cmss1	100	52.333	Esox_lucius
ENSMICG00000048977	CMSS1	100	93.548	ENSFCAG00000044577	CMSS1	100	93.548	Felis_catus
ENSMICG00000048977	CMSS1	91	63.713	ENSFALG00000005816	CMSS1	100	63.713	Ficedula_albicollis
ENSMICG00000048977	CMSS1	88	91.667	ENSFDAG00000012577	CMSS1	100	91.667	Fukomys_damarensis
ENSMICG00000048977	CMSS1	87	61.039	ENSFHEG00000012008	cmss1	95	61.039	Fundulus_heteroclitus
ENSMICG00000048977	CMSS1	99	52.482	ENSGMOG00000016729	cmss1	100	52.632	Gadus_morhua
ENSMICG00000048977	CMSS1	99	63.953	ENSGALG00000015267	CMSS1	99	63.602	Gallus_gallus
ENSMICG00000048977	CMSS1	80	64.734	ENSGAFG00000021217	cmss1	76	64.500	Gambusia_affinis
ENSMICG00000048977	CMSS1	99	48.944	ENSGACG00000002798	cmss1	100	49.296	Gasterosteus_aculeatus
ENSMICG00000048977	CMSS1	91	69.198	ENSGAGG00000019861	CMSS1	92	69.198	Gopherus_agassizii
ENSMICG00000048977	CMSS1	100	91.571	ENSGGOG00000014125	CMSS1	100	91.571	Gorilla_gorilla
ENSMICG00000048977	CMSS1	100	52.414	ENSHBUG00000008431	cmss1	100	52.414	Haplochromis_burtoni
ENSMICG00000048977	CMSS1	98	86.614	ENSHGLG00000019481	CMSS1	100	86.614	Heterocephalus_glaber_female
ENSMICG00000048977	CMSS1	98	86.667	ENSHGLG00100010314	CMSS1	99	86.667	Heterocephalus_glaber_male
ENSMICG00000048977	CMSS1	100	53.041	ENSHCOG00000003222	cmss1	100	55.932	Hippocampus_comes
ENSMICG00000048977	CMSS1	100	48.829	ENSIPUG00000011591	cmss1	100	50.000	Ictalurus_punctatus
ENSMICG00000048977	CMSS1	100	90.288	ENSSTOG00000019366	CMSS1	100	90.288	Ictidomys_tridecemlineatus
ENSMICG00000048977	CMSS1	100	86.022	ENSJJAG00000014894	Cmss1	100	86.022	Jaculus_jaculus
ENSMICG00000048977	CMSS1	78	55.446	ENSKMAG00000002390	cmss1	80	55.000	Kryptolebias_marmoratus
ENSMICG00000048977	CMSS1	78	59.113	ENSLBEG00000006298	cmss1	82	58.706	Labrus_bergylta
ENSMICG00000048977	CMSS1	88	65.652	ENSLACG00000009293	CMSS1	100	65.652	Latimeria_chalumnae
ENSMICG00000048977	CMSS1	100	52.297	ENSLOCG00000009391	cmss1	100	53.357	Lepisosteus_oculatus
ENSMICG00000048977	CMSS1	88	90.351	ENSLAFG00000017509	CMSS1	100	90.351	Loxodonta_africana
ENSMICG00000048977	CMSS1	100	92.473	ENSMFAG00000045006	CMSS1	100	92.473	Macaca_fascicularis
ENSMICG00000048977	CMSS1	100	92.115	ENSMMUG00000002939	CMSS1	100	92.115	Macaca_mulatta
ENSMICG00000048977	CMSS1	100	92.115	ENSMNEG00000031315	CMSS1	100	92.115	Macaca_nemestrina
ENSMICG00000048977	CMSS1	100	91.756	ENSMLEG00000033660	CMSS1	100	91.756	Mandrillus_leucophaeus
ENSMICG00000048977	CMSS1	100	53.041	ENSMAMG00000017176	cmss1	100	54.266	Mastacembelus_armatus
ENSMICG00000048977	CMSS1	100	51.546	ENSMZEG00005021886	cmss1	100	52.577	Maylandia_zebra
ENSMICG00000048977	CMSS1	88	67.544	ENSMGAG00000014360	CMSS1	100	67.544	Meleagris_gallopavo
ENSMICG00000048977	CMSS1	100	59.857	ENSMAUG00000020609	Cmss1	100	59.857	Mesocricetus_auratus
ENSMICG00000048977	CMSS1	100	82.079	ENSMOCG00000021937	Cmss1	100	82.079	Microtus_ochrogaster
ENSMICG00000048977	CMSS1	78	62.376	ENSMMOG00000019794	cmss1	83	62.000	Mola_mola
ENSMICG00000048977	CMSS1	99	72.973	ENSMODG00000002275	CMSS1	98	72.519	Monodelphis_domestica
ENSMICG00000048977	CMSS1	100	53.608	ENSMALG00000004250	cmss1	100	52.577	Monopterus_albus
ENSMICG00000048977	CMSS1	100	81.786	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.786	Mus_caroli
ENSMICG00000048977	CMSS1	100	82.857	ENSMUSG00000022748	Cmss1	100	82.857	Mus_musculus
ENSMICG00000048977	CMSS1	100	82.500	MGP_PahariEiJ_G0016524	Cmss1	100	82.500	Mus_pahari
ENSMICG00000048977	CMSS1	100	82.143	MGP_SPRETEiJ_G0021724	Cmss1	100	82.143	Mus_spretus
ENSMICG00000048977	CMSS1	99	91.120	ENSMPUG00000011324	CMSS1	100	91.923	Mustela_putorius_furo
ENSMICG00000048977	CMSS1	99	90.458	ENSMLUG00000001131	CMSS1	99	91.154	Myotis_lucifugus
ENSMICG00000048977	CMSS1	100	86.022	ENSNGAG00000020316	Cmss1	100	86.022	Nannospalax_galili
ENSMICG00000048977	CMSS1	100	51.020	ENSNBRG00000003095	cmss1	100	52.234	Neolamprologus_brichardi
ENSMICG00000048977	CMSS1	100	93.190	ENSNLEG00000034172	CMSS1	100	93.190	Nomascus_leucogenys
ENSMICG00000048977	CMSS1	88	65.351	ENSMEUG00000014505	CMSS1	100	65.351	Notamacropus_eugenii
ENSMICG00000048977	CMSS1	100	90.647	ENSOPRG00000002986	CMSS1	100	90.647	Ochotona_princeps
ENSMICG00000048977	CMSS1	100	85.663	ENSODEG00000005226	-	100	85.663	Octodon_degus
ENSMICG00000048977	CMSS1	100	76.703	ENSODEG00000001853	-	100	76.703	Octodon_degus
ENSMICG00000048977	CMSS1	100	81.495	ENSODEG00000003558	-	100	81.495	Octodon_degus
ENSMICG00000048977	CMSS1	100	71.223	ENSODEG00000009446	-	100	71.223	Octodon_degus
ENSMICG00000048977	CMSS1	78	62.376	ENSONIG00000006678	cmss1	77	62.000	Oreochromis_niloticus
ENSMICG00000048977	CMSS1	99	70.817	ENSOANG00000007529	CMSS1	100	73.391	Ornithorhynchus_anatinus
ENSMICG00000048977	CMSS1	99	91.085	ENSOCUG00000025366	CMSS1	93	91.085	Oryctolagus_cuniculus
ENSMICG00000048977	CMSS1	100	54.795	ENSORLG00000020340	cmss1	100	55.479	Oryzias_latipes
ENSMICG00000048977	CMSS1	88	56.769	ENSORLG00020012235	cmss1	85	59.500	Oryzias_latipes_hni
ENSMICG00000048977	CMSS1	78	58.416	ENSORLG00015015551	cmss1	75	58.000	Oryzias_latipes_hsok
ENSMICG00000048977	CMSS1	100	52.189	ENSOMEG00000012555	cmss1	100	55.363	Oryzias_melastigma
ENSMICG00000048977	CMSS1	88	95.614	ENSOGAG00000002045	CMSS1	100	95.614	Otolemur_garnettii
ENSMICG00000048977	CMSS1	98	88.372	ENSOARG00000017899	CMSS1	89	88.372	Ovis_aries
ENSMICG00000048977	CMSS1	100	91.954	ENSPPAG00000038515	CMSS1	95	92.636	Pan_paniscus
ENSMICG00000048977	CMSS1	100	92.473	ENSPPRG00000016767	CMSS1	100	92.473	Panthera_pardus
ENSMICG00000048977	CMSS1	100	92.115	ENSPTIG00000018274	CMSS1	100	92.115	Panthera_tigris_altaica
ENSMICG00000048977	CMSS1	100	91.756	ENSPTRG00000015157	CMSS1	100	92.653	Pan_troglodytes
ENSMICG00000048977	CMSS1	100	87.739	ENSPANG00000019980	CMSS1	99	88.372	Papio_anubis
ENSMICG00000048977	CMSS1	91	57.471	ENSPKIG00000012609	cmss1	97	57.692	Paramormyrops_kingsleyae
ENSMICG00000048977	CMSS1	88	71.179	ENSPSIG00000003849	CMSS1	100	71.179	Pelodiscus_sinensis
ENSMICG00000048977	CMSS1	78	62.562	ENSPMGG00000010286	cmss1	86	62.189	Periophthalmus_magnuspinnatus
ENSMICG00000048977	CMSS1	100	83.929	ENSPEMG00000016384	Cmss1	100	83.929	Peromyscus_maniculatus_bairdii
ENSMICG00000048977	CMSS1	78	52.941	ENSPMAG00000001146	cmss1	98	53.000	Petromyzon_marinus
ENSMICG00000048977	CMSS1	99	72.868	ENSPCIG00000015656	CMSS1	98	72.868	Phascolarctos_cinereus
ENSMICG00000048977	CMSS1	100	51.186	ENSPFOG00000016849	cmss1	100	54.167	Poecilia_formosa
ENSMICG00000048977	CMSS1	100	50.847	ENSPLAG00000008323	cmss1	100	53.819	Poecilia_latipinna
ENSMICG00000048977	CMSS1	100	50.842	ENSPMEG00000021020	cmss1	100	53.819	Poecilia_mexicana
ENSMICG00000048977	CMSS1	90	59.751	ENSPREG00000007618	cmss1	68	63.500	Poecilia_reticulata
ENSMICG00000048977	CMSS1	100	91.039	ENSPPYG00000013606	CMSS1	100	91.039	Pongo_abelii
ENSMICG00000048977	CMSS1	100	97.122	ENSPCOG00000020035	CMSS1	100	97.122	Propithecus_coquereli
ENSMICG00000048977	CMSS1	100	78.136	ENSPVAG00000017031	CMSS1	100	78.136	Pteropus_vampyrus
ENSMICG00000048977	CMSS1	91	51.698	ENSPNYG00000013428	cmss1	97	52.830	Pundamilia_nyererei
ENSMICG00000048977	CMSS1	100	49.153	ENSPNAG00000007912	cmss1	100	49.831	Pygocentrus_nattereri
ENSMICG00000048977	CMSS1	98	81.712	ENSRNOG00000027888	Cmss1	98	81.712	Rattus_norvegicus
ENSMICG00000048977	CMSS1	100	90.681	ENSRBIG00000037931	CMSS1	100	90.681	Rhinopithecus_bieti
ENSMICG00000048977	CMSS1	100	90.681	ENSRROG00000042910	CMSS1	100	90.681	Rhinopithecus_roxellana
ENSMICG00000048977	CMSS1	100	91.221	ENSSBOG00000030980	CMSS1	100	91.221	Saimiri_boliviensis_boliviensis
ENSMICG00000048977	CMSS1	95	74.206	ENSSHAG00000009321	CMSS1	99	74.206	Sarcophilus_harrisii
ENSMICG00000048977	CMSS1	100	53.535	ENSSFOG00015001509	cmss1	100	54.138	Scleropages_formosus
ENSMICG00000048977	CMSS1	100	55.326	ENSSMAG00000001653	cmss1	100	55.326	Scophthalmus_maximus
ENSMICG00000048977	CMSS1	100	54.483	ENSSDUG00000007719	cmss1	100	55.172	Seriola_dumerili
ENSMICG00000048977	CMSS1	80	64.734	ENSSLDG00000012300	cmss1	93	52.889	Seriola_lalandi_dorsalis
ENSMICG00000048977	CMSS1	100	73.571	ENSSARG00000003584	CMSS1	100	73.571	Sorex_araneus
ENSMICG00000048977	CMSS1	87	69.469	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSMICG00000048977	CMSS1	93	55.094	ENSSPAG00000019182	cmss1	82	56.015	Stegastes_partitus
ENSMICG00000048977	CMSS1	100	92.473	ENSSSCG00000011970	CMSS1	100	92.473	Sus_scrofa
ENSMICG00000048977	CMSS1	88	64.629	ENSTGUG00000013635	CMSS1	100	64.629	Taeniopygia_guttata
ENSMICG00000048977	CMSS1	100	50.853	ENSTRUG00000015265	cmss1	100	52.113	Takifugu_rubripes
ENSMICG00000048977	CMSS1	78	55.941	ENSTNIG00000002880	cmss1	72	55.500	Tetraodon_nigroviridis
ENSMICG00000048977	CMSS1	100	61.071	ENSTBEG00000016722	CMSS1	100	61.071	Tupaia_belangeri
ENSMICG00000048977	CMSS1	100	87.814	ENSTTRG00000001562	CMSS1	100	87.814	Tursiops_truncatus
ENSMICG00000048977	CMSS1	99	91.085	ENSUAMG00000024209	CMSS1	100	94.619	Ursus_americanus
ENSMICG00000048977	CMSS1	99	90.310	ENSUMAG00000001983	CMSS1	99	89.922	Ursus_maritimus
ENSMICG00000048977	CMSS1	100	69.892	ENSVPAG00000000263	CMSS1	100	69.892	Vicugna_pacos
ENSMICG00000048977	CMSS1	95	92.276	ENSVVUG00000021647	-	100	92.276	Vulpes_vulpes
ENSMICG00000048977	CMSS1	83	94.931	ENSVVUG00000007776	-	85	94.931	Vulpes_vulpes
ENSMICG00000048977	CMSS1	100	56.738	ENSXETG00000011858	cmss1	100	56.383	Xenopus_tropicalis
ENSMICG00000048977	CMSS1	80	63.942	ENSXCOG00000018724	cmss1	68	64.000	Xiphophorus_couchianus
ENSMICG00000048977	CMSS1	80	63.942	ENSXMAG00000011243	cmss1	75	64.000	Xiphophorus_maculatus