EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000049087 (Gene tree)
Gene ID: 105879786
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 26500 bases
Position: chr1:85931223-85957722
Accession: 105879786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000050731	MMR_HSR1	PF01926.23	3.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000072913	LSG1-201	2426	XM_012780274	ENSMICP00000050731	656 (aa)	XP_012635728	UPI000642B6EE

Gene Model

Click here to download ENSMICG00000049087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000049087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000049087	LSG1	100	85.584	ENSG00000041802	LSG1	100	85.584	Homo_sapiens
ENSMICG00000049087	LSG1	99	64.742	ENSAPOG00000009694	lsg1	99	64.742	Acanthochromis_polyacanthus
ENSMICG00000049087	LSG1	99	81.032	ENSAMEG00000009343	LSG1	99	81.032	Ailuropoda_melanoleuca
ENSMICG00000049087	LSG1	98	64.806	ENSACIG00000012406	lsg1	99	63.636	Amphilophus_citrinellus
ENSMICG00000049087	LSG1	99	62.930	ENSAOCG00000016066	lsg1	99	64.242	Amphiprion_ocellaris
ENSMICG00000049087	LSG1	99	63.788	ENSAPEG00000003252	lsg1	99	64.091	Amphiprion_percula
ENSMICG00000049087	LSG1	98	64.386	ENSATEG00000011794	lsg1	99	64.286	Anabas_testudineus
ENSMICG00000049087	LSG1	95	64.070	ENSACAG00000004222	LSG1	99	63.333	Anolis_carolinensis
ENSMICG00000049087	LSG1	100	88.164	ENSANAG00000021153	LSG1	100	88.164	Aotus_nancymaae
ENSMICG00000049087	LSG1	99	62.012	ENSACLG00000000520	lsg1	99	63.374	Astatotilapia_calliptera
ENSMICG00000049087	LSG1	99	62.146	ENSAMXG00000008271	lsg1	99	62.012	Astyanax_mexicanus
ENSMICG00000049087	LSG1	100	83.841	ENSBTAG00000008461	LSG1	100	84.451	Bos_taurus
ENSMICG00000049087	LSG1	67	49.490	WBGene00016907	C53H9.2	90	56.452	Caenorhabditis_elegans
ENSMICG00000049087	LSG1	100	87.860	ENSCJAG00000013962	LSG1	100	87.860	Callithrix_jacchus
ENSMICG00000049087	LSG1	95	82.720	ENSCAFG00000013445	LSG1	99	82.720	Canis_familiaris
ENSMICG00000049087	LSG1	99	81.392	ENSCAFG00020002216	LSG1	99	82.504	Canis_lupus_dingo
ENSMICG00000049087	LSG1	99	83.359	ENSCHIG00000015769	LSG1	99	83.359	Capra_hircus
ENSMICG00000049087	LSG1	100	86.950	ENSTSYG00000001447	LSG1	100	86.950	Carlito_syrichta
ENSMICG00000049087	LSG1	95	75.277	ENSCAPG00000009856	LSG1	100	76.115	Cavia_aperea
ENSMICG00000049087	LSG1	100	86.191	ENSCCAG00000035744	LSG1	100	86.191	Cebus_capucinus
ENSMICG00000049087	LSG1	100	86.343	ENSCATG00000042060	LSG1	100	84.674	Cercocebus_atys
ENSMICG00000049087	LSG1	100	87.253	ENSCSAG00000008796	LSG1	92	87.253	Chlorocebus_sabaeus
ENSMICG00000049087	LSG1	99	67.771	ENSCPBG00000015941	LSG1	83	67.771	Chrysemys_picta_bellii
ENSMICG00000049087	LSG1	72	61.579	ENSCING00000007079	-	99	61.579	Ciona_intestinalis
ENSMICG00000049087	LSG1	77	54.400	ENSCSAVG00000002514	-	97	54.400	Ciona_savignyi
ENSMICG00000049087	LSG1	100	86.646	ENSCANG00000030709	LSG1	100	86.646	Colobus_angolensis_palliatus
ENSMICG00000049087	LSG1	100	82.496	ENSCGRG00001019846	Lsg1	100	82.496	Cricetulus_griseus_chok1gshd
ENSMICG00000049087	LSG1	100	82.496	ENSCGRG00000014617	Lsg1	100	82.496	Cricetulus_griseus_crigri
ENSMICG00000049087	LSG1	98	63.328	ENSCSEG00000008522	lsg1	99	62.689	Cynoglossus_semilaevis
ENSMICG00000049087	LSG1	97	64.632	ENSCVAG00000002484	lsg1	99	64.502	Cyprinodon_variegatus
ENSMICG00000049087	LSG1	99	65.198	ENSDARG00000015352	lsg1	99	65.554	Danio_rerio
ENSMICG00000049087	LSG1	100	83.915	ENSDNOG00000006224	LSG1	100	83.612	Dasypus_novemcinctus
ENSMICG00000049087	LSG1	99	46.899	FBgn0266284	Ns3	99	46.596	Drosophila_melanogaster
ENSMICG00000049087	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSMICG00000049087	LSG1	88	57.336	ENSEBUG00000003119	lsg1	85	58.206	Eptatretus_burgeri
ENSMICG00000049087	LSG1	100	85.584	ENSEASG00005000678	LSG1	100	85.584	Equus_asinus_asinus
ENSMICG00000049087	LSG1	100	85.736	ENSECAG00000017659	LSG1	100	85.736	Equus_caballus
ENSMICG00000049087	LSG1	87	81.897	ENSEEUG00000015217	LSG1	87	81.897	Erinaceus_europaeus
ENSMICG00000049087	LSG1	99	60.850	ENSELUG00000023973	lsg1	99	60.395	Esox_lucius
ENSMICG00000049087	LSG1	99	83.435	ENSFCAG00000024957	LSG1	99	83.435	Felis_catus
ENSMICG00000049087	LSG1	92	66.721	ENSFALG00000007210	LSG1	94	66.721	Ficedula_albicollis
ENSMICG00000049087	LSG1	100	78.201	ENSFDAG00000017373	LSG1	100	78.201	Fukomys_damarensis
ENSMICG00000049087	LSG1	97	64.319	ENSFHEG00000003680	lsg1	99	64.036	Fundulus_heteroclitus
ENSMICG00000049087	LSG1	84	69.547	ENSGMOG00000015834	lsg1	89	68.482	Gadus_morhua
ENSMICG00000049087	LSG1	99	63.293	ENSGALG00000007058	LSG1	87	62.406	Gallus_gallus
ENSMICG00000049087	LSG1	97	64.163	ENSGAFG00000015831	lsg1	99	63.198	Gambusia_affinis
ENSMICG00000049087	LSG1	98	62.250	ENSGACG00000009323	lsg1	99	61.934	Gasterosteus_aculeatus
ENSMICG00000049087	LSG1	100	86.039	ENSGGOG00000000520	LSG1	100	86.039	Gorilla_gorilla
ENSMICG00000049087	LSG1	99	62.158	ENSHBUG00000005659	lsg1	99	63.415	Haplochromis_burtoni
ENSMICG00000049087	LSG1	100	74.281	ENSHGLG00000017390	LSG1	100	75.643	Heterocephalus_glaber_female
ENSMICG00000049087	LSG1	100	74.281	ENSHGLG00100018587	LSG1	100	75.643	Heterocephalus_glaber_male
ENSMICG00000049087	LSG1	97	63.354	ENSHCOG00000016848	lsg1	99	63.222	Hippocampus_comes
ENSMICG00000049087	LSG1	99	64.545	ENSIPUG00000008631	lsg1	99	64.350	Ictalurus_punctatus
ENSMICG00000049087	LSG1	81	79.880	ENSSTOG00000010234	LSG1	99	81.673	Ictidomys_tridecemlineatus
ENSMICG00000049087	LSG1	100	79.154	ENSJJAG00000015513	Lsg1	100	79.154	Jaculus_jaculus
ENSMICG00000049087	LSG1	98	62.830	ENSKMAG00000009681	lsg1	99	61.782	Kryptolebias_marmoratus
ENSMICG00000049087	LSG1	98	62.830	ENSLBEG00000024261	lsg1	99	62.957	Labrus_bergylta
ENSMICG00000049087	LSG1	99	63.839	ENSLACG00000013399	LSG1	99	63.839	Latimeria_chalumnae
ENSMICG00000049087	LSG1	98	64.869	ENSLOCG00000004918	lsg1	99	65.106	Lepisosteus_oculatus
ENSMICG00000049087	LSG1	100	83.232	ENSLAFG00000012919	-	100	83.232	Loxodonta_africana
ENSMICG00000049087	LSG1	100	86.950	ENSMFAG00000039903	LSG1	100	85.281	Macaca_fascicularis
ENSMICG00000049087	LSG1	100	87.102	ENSMMUG00000010708	LSG1	100	87.102	Macaca_mulatta
ENSMICG00000049087	LSG1	100	86.950	ENSMNEG00000031538	LSG1	100	85.281	Macaca_nemestrina
ENSMICG00000049087	LSG1	100	86.798	ENSMLEG00000041184	LSG1	100	86.798	Mandrillus_leucophaeus
ENSMICG00000049087	LSG1	99	62.918	ENSMAMG00000000470	lsg1	99	62.614	Mastacembelus_armatus
ENSMICG00000049087	LSG1	99	62.310	ENSMZEG00005017865	lsg1	99	63.567	Maylandia_zebra
ENSMICG00000049087	LSG1	89	64.636	ENSMGAG00000007050	LSG1	99	64.736	Meleagris_gallopavo
ENSMICG00000049087	LSG1	91	81.000	ENSMAUG00000016976	Lsg1	93	81.500	Mesocricetus_auratus
ENSMICG00000049087	LSG1	100	79.514	ENSMOCG00000022136	Lsg1	100	79.363	Microtus_ochrogaster
ENSMICG00000049087	LSG1	83	72.848	ENSMMOG00000008884	lsg1	98	70.886	Mola_mola
ENSMICG00000049087	LSG1	99	57.727	ENSMODG00000019828	LSG1	99	57.357	Monodelphis_domestica
ENSMICG00000049087	LSG1	100	81.098	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.250	Mus_caroli
ENSMICG00000049087	LSG1	100	81.402	ENSMUSG00000022538	Lsg1	100	81.555	Mus_musculus
ENSMICG00000049087	LSG1	98	81.579	MGP_PahariEiJ_G0016352	Lsg1	100	81.279	Mus_pahari
ENSMICG00000049087	LSG1	100	81.098	MGP_SPRETEiJ_G0021544	Lsg1	100	81.250	Mus_spretus
ENSMICG00000049087	LSG1	99	82.523	ENSMPUG00000003734	LSG1	99	82.523	Mustela_putorius_furo
ENSMICG00000049087	LSG1	99	85.518	ENSMLUG00000012548	LSG1	99	85.518	Myotis_lucifugus
ENSMICG00000049087	LSG1	100	80.488	ENSNGAG00000021872	Lsg1	100	80.488	Nannospalax_galili
ENSMICG00000049087	LSG1	100	86.646	ENSNLEG00000008293	LSG1	100	86.646	Nomascus_leucogenys
ENSMICG00000049087	LSG1	69	68.539	ENSMEUG00000009041	-	82	69.006	Notamacropus_eugenii
ENSMICG00000049087	LSG1	99	63.063	ENSONIG00000002635	lsg1	99	62.631	Oreochromis_niloticus
ENSMICG00000049087	LSG1	95	71.474	ENSOANG00000012742	LSG1	99	70.994	Ornithorhynchus_anatinus
ENSMICG00000049087	LSG1	100	84.977	ENSOCUG00000004817	LSG1	100	84.977	Oryctolagus_cuniculus
ENSMICG00000049087	LSG1	98	63.863	ENSORLG00000007695	lsg1	99	63.262	Oryzias_latipes
ENSMICG00000049087	LSG1	98	63.084	ENSORLG00020016286	lsg1	99	62.199	Oryzias_latipes_hni
ENSMICG00000049087	LSG1	98	63.396	ENSORLG00015012025	lsg1	99	62.748	Oryzias_latipes_hsok
ENSMICG00000049087	LSG1	98	62.986	ENSOMEG00000022379	lsg1	99	61.890	Oryzias_melastigma
ENSMICG00000049087	LSG1	100	88.235	ENSOGAG00000003475	LSG1	100	88.235	Otolemur_garnettii
ENSMICG00000049087	LSG1	99	81.860	ENSOARG00000020403	LSG1	99	82.317	Ovis_aries
ENSMICG00000049087	LSG1	100	85.432	ENSPPAG00000029271	LSG1	100	85.432	Pan_paniscus
ENSMICG00000049087	LSG1	99	82.857	ENSPPRG00000010281	LSG1	99	82.857	Panthera_pardus
ENSMICG00000049087	LSG1	99	83.891	ENSPTIG00000010789	LSG1	99	83.891	Panthera_tigris_altaica
ENSMICG00000049087	LSG1	100	85.281	ENSPTRG00000015760	LSG1	100	85.281	Pan_troglodytes
ENSMICG00000049087	LSG1	100	86.646	ENSPANG00000018249	LSG1	100	84.977	Papio_anubis
ENSMICG00000049087	LSG1	96	64.297	ENSPKIG00000002895	lsg1	100	63.198	Paramormyrops_kingsleyae
ENSMICG00000049087	LSG1	96	64.743	ENSPSIG00000009821	LSG1	99	64.420	Pelodiscus_sinensis
ENSMICG00000049087	LSG1	95	64.603	ENSPMGG00000000931	lsg1	99	63.191	Periophthalmus_magnuspinnatus
ENSMICG00000049087	LSG1	100	80.880	ENSPEMG00000012082	-	100	80.425	Peromyscus_maniculatus_bairdii
ENSMICG00000049087	LSG1	99	59.431	ENSPMAG00000007451	lsg1	99	59.520	Petromyzon_marinus
ENSMICG00000049087	LSG1	99	66.667	ENSPCIG00000013890	LSG1	82	66.667	Phascolarctos_cinereus
ENSMICG00000049087	LSG1	97	64.241	ENSPFOG00000021882	lsg1	99	63.731	Poecilia_formosa
ENSMICG00000049087	LSG1	97	63.622	ENSPLAG00000019536	lsg1	99	62.985	Poecilia_latipinna
ENSMICG00000049087	LSG1	97	63.426	ENSPMEG00000017281	lsg1	99	62.946	Poecilia_mexicana
ENSMICG00000049087	LSG1	97	54.033	ENSPREG00000006048	lsg1	99	54.235	Poecilia_reticulata
ENSMICG00000049087	LSG1	92	85.855	ENSPPYG00000014425	LSG1	100	85.855	Pongo_abelii
ENSMICG00000049087	LSG1	90	89.333	ENSPCAG00000005511	LSG1	90	89.333	Procavia_capensis
ENSMICG00000049087	LSG1	100	93.323	ENSPCOG00000012360	LSG1	100	93.323	Propithecus_coquereli
ENSMICG00000049087	LSG1	99	61.862	ENSPNYG00000021994	lsg1	99	63.222	Pundamilia_nyererei
ENSMICG00000049087	LSG1	99	64.145	ENSPNAG00000015533	lsg1	99	64.036	Pygocentrus_nattereri
ENSMICG00000049087	LSG1	100	81.364	ENSRNOG00000001727	Lsg1	100	81.364	Rattus_norvegicus
ENSMICG00000049087	LSG1	100	85.888	ENSRBIG00000029053	LSG1	100	85.888	Rhinopithecus_bieti
ENSMICG00000049087	LSG1	100	85.888	ENSRROG00000037702	LSG1	100	85.888	Rhinopithecus_roxellana
ENSMICG00000049087	LSG1	76	46.154	YGL099W	LSG1	75	46.581	Saccharomyces_cerevisiae
ENSMICG00000049087	LSG1	100	87.405	ENSSBOG00000034938	LSG1	100	87.405	Saimiri_boliviensis_boliviensis
ENSMICG00000049087	LSG1	78	66.667	ENSSHAG00000003487	LSG1	99	66.667	Sarcophilus_harrisii
ENSMICG00000049087	LSG1	98	63.889	ENSSFOG00015008955	lsg1	99	63.636	Scleropages_formosus
ENSMICG00000049087	LSG1	98	64.571	ENSSDUG00000004622	lsg1	99	63.444	Seriola_dumerili
ENSMICG00000049087	LSG1	98	64.341	ENSSLDG00000010869	lsg1	99	63.526	Seriola_lalandi_dorsalis
ENSMICG00000049087	LSG1	82	80.938	ENSSARG00000012981	LSG1	81	80.938	Sorex_araneus
ENSMICG00000049087	LSG1	99	66.467	ENSSPUG00000016347	LSG1	99	65.967	Sphenodon_punctatus
ENSMICG00000049087	LSG1	99	62.614	ENSSPAG00000005508	lsg1	99	63.222	Stegastes_partitus
ENSMICG00000049087	LSG1	99	83.206	ENSSSCG00000011827	LSG1	99	82.595	Sus_scrofa
ENSMICG00000049087	LSG1	89	64.775	ENSTGUG00000009068	LSG1	99	63.712	Taeniopygia_guttata
ENSMICG00000049087	LSG1	97	60.280	ENSTRUG00000017380	lsg1	99	60.334	Takifugu_rubripes
ENSMICG00000049087	LSG1	97	64.286	ENSTNIG00000015570	lsg1	99	63.485	Tetraodon_nigroviridis
ENSMICG00000049087	LSG1	99	76.524	ENSTTRG00000000559	LSG1	99	75.762	Tursiops_truncatus
ENSMICG00000049087	LSG1	99	82.523	ENSUAMG00000012454	LSG1	99	82.523	Ursus_americanus
ENSMICG00000049087	LSG1	99	82.523	ENSUMAG00000000855	LSG1	99	82.523	Ursus_maritimus
ENSMICG00000049087	LSG1	95	79.040	ENSVPAG00000012400	LSG1	99	79.040	Vicugna_pacos
ENSMICG00000049087	LSG1	95	81.920	ENSVVUG00000008956	LSG1	97	81.920	Vulpes_vulpes
ENSMICG00000049087	LSG1	99	65.158	ENSXETG00000003451	lsg1	99	65.331	Xenopus_tropicalis
ENSMICG00000049087	LSG1	97	63.537	ENSXCOG00000003239	lsg1	99	62.742	Xiphophorus_couchianus
ENSMICG00000049087	LSG1	97	63.665	ENSXMAG00000005536	lsg1	99	63.293	Xiphophorus_maculatus