EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000004809 (Gene tree)
Gene ID: 105538864
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3B
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 10754 bases
Position: chrKN974095.1:4034459-4045212
Accession: 105538864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000001202	APOBEC_N	PF08210.11	7.5e-101	1	2
ENSMLEP00000001202	APOBEC_N	PF08210.11	7.5e-101	2	2
ENSMLEP00000001202	APOBEC_C	PF05240.14	8.3e-64	1	2
ENSMLEP00000001202	APOBEC_C	PF05240.14	8.3e-64	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000005318	-	1513	XM_011978846	ENSMLEP00000001202	382 (aa)	XP_011834236	A0A2K5XD19

Gene Model

Click here to download ENSMLEG00000004809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000004809's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000004809	-	95	32.973	ENSMLEG00000028328	APOBEC2	80	33.514
ENSMLEG00000004809	-	68	49.612	ENSMLEG00000039759	-	84	47.794
ENSMLEG00000004809	-	98	50.265	ENSMLEG00000036992	APOBEC3C	100	50.265
ENSMLEG00000004809	-	99	58.377	ENSMLEG00000029642	APOBEC3F	100	58.377
ENSMLEG00000004809	-	99	57.180	ENSMLEG00000024444	APOBEC3G	95	57.180
ENSMLEG00000004809	-	97	34.848	ENSMLEG00000033417	APOBEC3H	90	35.233
ENSMLEG00000004809	-	96	45.213	ENSMLEG00000040938	AICDA	95	44.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000004809	-	100	83.508	ENSG00000179750	APOBEC3B	100	83.508	Homo_sapiens
ENSMLEG00000004809	-	98	80.311	ENSG00000128383	APOBEC3A	96	80.311	Homo_sapiens
ENSMLEG00000004809	-	99	56.989	ENSCJAG00000012500	-	100	56.989	Callithrix_jacchus
ENSMLEG00000004809	-	99	62.694	ENSTSYG00000035593	-	99	62.694	Carlito_syrichta
ENSMLEG00000004809	-	100	62.176	ENSCCAG00000027450	-	100	62.176	Cebus_capucinus
ENSMLEG00000004809	-	99	96.825	ENSCATG00000013527	-	96	87.047	Cercocebus_atys
ENSMLEG00000004809	-	99	91.534	ENSCSAG00000006445	-	77	91.534	Chlorocebus_sabaeus
ENSMLEG00000004809	-	74	83.673	ENSCSAG00000018401	-	70	83.673	Chlorocebus_sabaeus
ENSMLEG00000004809	-	99	88.144	ENSCANG00000030513	-	97	88.144	Colobus_angolensis_palliatus
ENSMLEG00000004809	-	100	82.461	ENSGGOG00000006721	APOBEC3B	100	82.461	Gorilla_gorilla
ENSMLEG00000004809	-	99	90.838	ENSMFAG00000008980	APOBEC3A	98	90.838	Macaca_fascicularis
ENSMLEG00000004809	-	98	84.974	ENSMMUG00000042504	APOBEC3A	97	84.574	Macaca_mulatta
ENSMLEG00000004809	-	99	94.444	ENSMMUG00000004015	-	98	93.386	Macaca_mulatta
ENSMLEG00000004809	-	99	93.030	ENSMNEG00000043211	-	95	93.030	Macaca_nemestrina
ENSMLEG00000004809	-	99	83.204	ENSNLEG00000015215	-	95	80.729	Nomascus_leucogenys
ENSMLEG00000004809	-	100	85.340	ENSPPAG00000009288	APOBEC3B	100	85.340	Pan_paniscus
ENSMLEG00000004809	-	98	78.756	ENSPTRG00000014384	APOBEC3B	100	76.702	Pan_troglodytes
ENSMLEG00000004809	-	99	94.318	ENSPANG00000006941	APOBEC3B	96	84.456	Papio_anubis
ENSMLEG00000004809	-	100	84.555	ENSPPYG00000011831	-	100	84.555	Pongo_abelii
ENSMLEG00000004809	-	76	62.162	ENSPCOG00000017606	-	95	62.162	Propithecus_coquereli
ENSMLEG00000004809	-	100	91.623	ENSRBIG00000042829	-	100	91.623	Rhinopithecus_bieti
ENSMLEG00000004809	-	100	91.623	ENSRROG00000028773	APOBEC3G	100	91.623	Rhinopithecus_roxellana