EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000006946 (Gene tree)
Gene ID: 105538720
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 103401 bases
Position: chrKN974073.1:2669530-2772930
Accession: 105538719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000001792	ResIII	PF04851.15	1.2e-11	1	1
ENSMLEP00000001795	ResIII	PF04851.15	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000007780	-	5552	XM_011978649	ENSMLEP00000001802	299 (aa)	XP_011834039	A0A2K5XES4
ENSMLET00000007797	-	5363	XM_011978648	ENSMLEP00000001804	117 (aa)	XP_011834038	A0A2K5XES7
ENSMLET00000007759	-	3070	XM_011978646	ENSMLEP00000001795	908 (aa)	XP_011834036	A0A2K5XEQ9
ENSMLET00000007748	-	3070	XM_011978647	ENSMLEP00000001792	908 (aa)	XP_011834037	A0A2K5XEQ9

Gene Model

Click here to download ENSMLEG00000006946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000006946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000006946	-	54	33.017	ENSMLEG00000038333	SMARCAD1	84	33.017
ENSMLEG00000006946	-	71	43.741	ENSMLEG00000038145	RAD54L	84	43.741
ENSMLEG00000006946	-	59	31.788	ENSMLEG00000019530	ERCC6L2	82	31.788
ENSMLEG00000006946	-	55	31.323	ENSMLEG00000030900	CHD1L	50	31.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000006946	-	100	97.692	ENSG00000197275	RAD54B	100	97.692	Homo_sapiens
ENSMLEG00000006946	-	80	98.623	ENSG00000265817	FSBP	100	98.623	Homo_sapiens
ENSMLEG00000006946	-	99	86.923	ENSAMEG00000005834	-	99	86.923	Ailuropoda_melanoleuca
ENSMLEG00000006946	-	99	54.536	ENSACIG00000013005	rad54b	99	54.536	Amphilophus_citrinellus
ENSMLEG00000006946	-	99	54.246	ENSAOCG00000008523	rad54b	99	54.246	Amphiprion_ocellaris
ENSMLEG00000006946	-	99	54.725	ENSAPEG00000001673	rad54b	99	54.835	Amphiprion_percula
ENSMLEG00000006946	-	99	54.317	ENSATEG00000001527	rad54b	99	54.317	Anabas_testudineus
ENSMLEG00000006946	-	99	69.760	ENSAPLG00000014366	-	99	69.760	Anas_platyrhynchos
ENSMLEG00000006946	-	87	71.106	ENSACAG00000003671	-	99	71.106	Anolis_carolinensis
ENSMLEG00000006946	-	71	94.599	ENSANAG00000019528	-	100	94.599	Aotus_nancymaae
ENSMLEG00000006946	-	86	59.166	ENSACLG00000007826	rad54b	92	59.166	Astatotilapia_calliptera
ENSMLEG00000006946	-	85	58.142	ENSAMXG00000039985	rad54b	94	57.881	Astyanax_mexicanus
ENSMLEG00000006946	-	99	85.352	ENSBTAG00000000632	RAD54B	99	85.352	Bos_taurus
ENSMLEG00000006946	-	79	35.475	WBGene00013792	Y116A8C.13	98	33.487	Caenorhabditis_elegans
ENSMLEG00000006946	-	100	94.396	ENSCJAG00000000080	-	100	96.138	Callithrix_jacchus
ENSMLEG00000006946	-	99	85.385	ENSCAFG00000009179	RAD54B	99	85.385	Canis_familiaris
ENSMLEG00000006946	-	99	85.275	ENSCAFG00020012084	-	99	85.275	Canis_lupus_dingo
ENSMLEG00000006946	-	99	84.802	ENSCHIG00000008230	-	99	84.802	Capra_hircus
ENSMLEG00000006946	-	99	89.549	ENSTSYG00000013234	-	99	89.549	Carlito_syrichta
ENSMLEG00000006946	-	99	84.141	ENSCPOG00000011643	-	99	84.141	Cavia_porcellus
ENSMLEG00000006946	-	100	94.396	ENSCCAG00000011754	-	100	96.000	Cebus_capucinus
ENSMLEG00000006946	-	100	99.670	ENSCATG00000030661	-	100	99.862	Cercocebus_atys
ENSMLEG00000006946	-	100	84.523	ENSCLAG00000010476	-	100	84.523	Chinchilla_lanigera
ENSMLEG00000006946	-	100	99.119	ENSCSAG00000012712	-	100	99.119	Chlorocebus_sabaeus
ENSMLEG00000006946	-	100	70.620	ENSCPBG00000003204	-	99	70.620	Chrysemys_picta_bellii
ENSMLEG00000006946	-	100	99.009	ENSCANG00000017939	-	100	99.448	Colobus_angolensis_palliatus
ENSMLEG00000006946	-	99	79.736	ENSCGRG00001020184	Rad54b	99	79.736	Cricetulus_griseus_chok1gshd
ENSMLEG00000006946	-	99	78.414	ENSCGRG00000016752	Rad54b	99	78.414	Cricetulus_griseus_crigri
ENSMLEG00000006946	-	91	75.000	ENSCSEG00000001601	rad54b	99	75.000	Cynoglossus_semilaevis
ENSMLEG00000006946	-	99	56.004	ENSCVAG00000009200	rad54b	99	56.004	Cyprinodon_variegatus
ENSMLEG00000006946	-	99	53.217	ENSDARG00000092134	rad54b	99	60.555	Danio_rerio
ENSMLEG00000006946	-	99	84.649	ENSDNOG00000015535	-	99	84.649	Dasypus_novemcinctus
ENSMLEG00000006946	-	99	84.396	ENSDORG00000002492	Rad54b	99	84.396	Dipodomys_ordii
ENSMLEG00000006946	-	87	81.496	ENSETEG00000010605	-	100	81.496	Echinops_telfairi
ENSMLEG00000006946	-	99	45.940	ENSEBUG00000009104	rad54b	99	46.559	Eptatretus_burgeri
ENSMLEG00000006946	-	97	86.297	ENSEASG00005004021	-	99	86.297	Equus_asinus_asinus
ENSMLEG00000006946	-	99	86.923	ENSECAG00000021949	-	99	86.923	Equus_caballus
ENSMLEG00000006946	-	83	81.761	ENSEEUG00000008056	-	83	81.761	Erinaceus_europaeus
ENSMLEG00000006946	-	99	53.635	ENSELUG00000009287	rad54b	99	53.846	Esox_lucius
ENSMLEG00000006946	-	99	86.689	ENSFCAG00000015513	-	99	90.193	Felis_catus
ENSMLEG00000006946	-	99	68.913	ENSFALG00000005467	-	99	68.913	Ficedula_albicollis
ENSMLEG00000006946	-	99	85.259	ENSFDAG00000020541	-	100	85.259	Fukomys_damarensis
ENSMLEG00000006946	-	86	58.291	ENSFHEG00000014382	rad54b	87	58.417	Fundulus_heteroclitus
ENSMLEG00000006946	-	86	56.156	ENSGMOG00000014774	rad54b	98	56.156	Gadus_morhua
ENSMLEG00000006946	-	100	68.472	ENSGALG00000043597	RAD54B	99	68.472	Gallus_gallus
ENSMLEG00000006946	-	99	54.267	ENSGAFG00000007901	rad54b	99	54.267	Gambusia_affinis
ENSMLEG00000006946	-	99	54.898	ENSGACG00000009128	rad54b	99	55.016	Gasterosteus_aculeatus
ENSMLEG00000006946	-	100	70.294	ENSGAGG00000018747	-	99	70.294	Gopherus_agassizii
ENSMLEG00000006946	-	99	97.470	ENSGGOG00000023516	-	99	97.470	Gorilla_gorilla
ENSMLEG00000006946	-	99	53.426	ENSHBUG00000016017	rad54b	99	53.426	Haplochromis_burtoni
ENSMLEG00000006946	-	99	83.825	ENSHGLG00000008263	RAD54B	99	83.825	Heterocephalus_glaber_female
ENSMLEG00000006946	-	99	83.062	ENSHGLG00100008108	-	99	83.062	Heterocephalus_glaber_male
ENSMLEG00000006946	-	99	52.688	ENSHCOG00000004764	rad54b	98	55.748	Hippocampus_comes
ENSMLEG00000006946	-	99	52.710	ENSIPUG00000018531	rad54b	99	52.710	Ictalurus_punctatus
ENSMLEG00000006946	-	99	84.547	ENSSTOG00000010791	-	99	84.547	Ictidomys_tridecemlineatus
ENSMLEG00000006946	-	99	81.938	ENSJJAG00000010314	Rad54b	99	81.938	Jaculus_jaculus
ENSMLEG00000006946	-	99	52.407	ENSKMAG00000004744	rad54b	99	52.407	Kryptolebias_marmoratus
ENSMLEG00000006946	-	82	70.187	ENSLACG00000000859	-	100	70.187	Latimeria_chalumnae
ENSMLEG00000006946	-	99	58.378	ENSLOCG00000010100	rad54b	97	62.515	Lepisosteus_oculatus
ENSMLEG00000006946	-	89	85.149	ENSLAFG00000015315	-	100	85.149	Loxodonta_africana
ENSMLEG00000006946	-	100	99.559	ENSMFAG00000031629	-	100	99.586	Macaca_fascicularis
ENSMLEG00000006946	-	100	99.559	ENSMMUG00000005659	-	100	99.559	Macaca_mulatta
ENSMLEG00000006946	-	100	99.449	ENSMNEG00000016408	-	100	99.449	Macaca_nemestrina
ENSMLEG00000006946	-	99	55.109	ENSMAMG00000012269	rad54b	99	54.891	Mastacembelus_armatus
ENSMLEG00000006946	-	99	53.640	ENSMZEG00005005281	rad54b	95	59.039	Maylandia_zebra
ENSMLEG00000006946	-	100	68.404	ENSMGAG00000012024	-	99	68.404	Meleagris_gallopavo
ENSMLEG00000006946	-	99	79.736	ENSMAUG00000013586	Rad54b	99	79.736	Mesocricetus_auratus
ENSMLEG00000006946	-	99	84.708	ENSMICG00000000754	-	99	84.708	Microcebus_murinus
ENSMLEG00000006946	-	99	77.473	ENSMOCG00000020035	Rad54b	99	77.692	Microtus_ochrogaster
ENSMLEG00000006946	-	99	53.813	ENSMMOG00000003394	rad54b	99	53.813	Mola_mola
ENSMLEG00000006946	-	88	77.114	ENSMODG00000007343	-	99	77.500	Monodelphis_domestica
ENSMLEG00000006946	-	71	58.942	ENSMALG00000001520	rad54b	99	58.942	Monopterus_albus
ENSMLEG00000006946	-	99	78.218	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.218	Mus_caroli
ENSMLEG00000006946	-	99	77.863	ENSMUSG00000078773	Rad54b	99	77.863	Mus_musculus
ENSMLEG00000006946	-	99	78.414	MGP_PahariEiJ_G0023933	Rad54b	99	78.414	Mus_pahari
ENSMLEG00000006946	-	99	78.768	MGP_SPRETEiJ_G0026758	Rad54b	99	78.768	Mus_spretus
ENSMLEG00000006946	-	89	87.515	ENSMPUG00000008878	-	99	87.515	Mustela_putorius_furo
ENSMLEG00000006946	-	100	84.539	ENSMLUG00000008953	-	100	84.539	Myotis_lucifugus
ENSMLEG00000006946	-	99	82.932	ENSNGAG00000017537	Rad54b	99	82.932	Nannospalax_galili
ENSMLEG00000006946	-	99	53.939	ENSNBRG00000013394	rad54b	99	53.939	Neolamprologus_brichardi
ENSMLEG00000006946	-	100	97.692	ENSNLEG00000003062	-	99	98.347	Nomascus_leucogenys
ENSMLEG00000006946	-	71	75.689	ENSMEUG00000012426	-	71	75.689	Notamacropus_eugenii
ENSMLEG00000006946	-	99	83.811	ENSODEG00000019564	-	99	83.811	Octodon_degus
ENSMLEG00000006946	-	78	86.862	ENSODEG00000002650	-	95	86.862	Octodon_degus
ENSMLEG00000006946	-	99	54.605	ENSONIG00000006067	rad54b	99	54.605	Oreochromis_niloticus
ENSMLEG00000006946	-	82	77.364	ENSOANG00000011348	-	99	77.364	Ornithorhynchus_anatinus
ENSMLEG00000006946	-	99	85.495	ENSOCUG00000016478	-	99	85.495	Oryctolagus_cuniculus
ENSMLEG00000006946	-	99	54.478	ENSORLG00000008918	rad54b	99	62.229	Oryzias_latipes
ENSMLEG00000006946	-	71	62.384	ENSORLG00020012171	rad54b	99	62.384	Oryzias_latipes_hni
ENSMLEG00000006946	-	99	54.277	ENSORLG00015018536	rad54b	99	54.277	Oryzias_latipes_hsok
ENSMLEG00000006946	-	84	59.250	ENSOMEG00000004345	rad54b	99	59.250	Oryzias_melastigma
ENSMLEG00000006946	-	99	86.813	ENSOGAG00000007854	-	99	86.813	Otolemur_garnettii
ENSMLEG00000006946	-	89	87.037	ENSOARG00000007691	-	99	87.037	Ovis_aries
ENSMLEG00000006946	-	100	95.824	ENSPPAG00000029572	-	100	95.824	Pan_paniscus
ENSMLEG00000006946	-	99	86.909	ENSPPRG00000007571	-	99	90.331	Panthera_pardus
ENSMLEG00000006946	-	80	90.331	ENSPTIG00000012670	-	99	90.331	Panthera_tigris_altaica
ENSMLEG00000006946	-	100	97.692	ENSPTRG00000020427	-	100	98.623	Pan_troglodytes
ENSMLEG00000006946	-	100	99.890	ENSPANG00000019566	-	100	99.890	Papio_anubis
ENSMLEG00000006946	-	99	58.370	ENSPKIG00000014974	rad54b	99	58.370	Paramormyrops_kingsleyae
ENSMLEG00000006946	-	100	69.423	ENSPSIG00000002383	-	99	73.039	Pelodiscus_sinensis
ENSMLEG00000006946	-	99	79.978	ENSPEMG00000012133	Rad54b	99	79.978	Peromyscus_maniculatus_bairdii
ENSMLEG00000006946	-	87	58.052	ENSPMAG00000002916	rad54b	99	58.302	Petromyzon_marinus
ENSMLEG00000006946	-	89	77.805	ENSPCIG00000020151	-	94	77.805	Phascolarctos_cinereus
ENSMLEG00000006946	-	99	55.059	ENSPFOG00000023411	rad54b	99	55.059	Poecilia_formosa
ENSMLEG00000006946	-	99	55.096	ENSPLAG00000010430	rad54b	99	55.096	Poecilia_latipinna
ENSMLEG00000006946	-	99	55.059	ENSPMEG00000016873	rad54b	95	59.236	Poecilia_mexicana
ENSMLEG00000006946	-	99	55.109	ENSPREG00000018443	rad54b	99	55.109	Poecilia_reticulata
ENSMLEG00000006946	-	100	97.473	ENSPPYG00000018750	-	100	97.473	Pongo_abelii
ENSMLEG00000006946	-	99	90.220	ENSPCOG00000026845	-	99	91.448	Propithecus_coquereli
ENSMLEG00000006946	-	87	89.879	ENSPVAG00000000261	-	92	89.879	Pteropus_vampyrus
ENSMLEG00000006946	-	86	58.682	ENSPNYG00000018303	rad54b	96	58.756	Pundamilia_nyererei
ENSMLEG00000006946	-	100	54.624	ENSPNAG00000000295	rad54b	99	54.624	Pygocentrus_nattereri
ENSMLEG00000006946	-	99	76.101	ENSRNOG00000039949	Rad54b	99	76.101	Rattus_norvegicus
ENSMLEG00000006946	-	100	98.348	ENSRBIG00000020419	-	100	98.348	Rhinopithecus_bieti
ENSMLEG00000006946	-	100	98.348	ENSRROG00000039897	-	100	98.348	Rhinopithecus_roxellana
ENSMLEG00000006946	-	81	36.609	YBR073W	RDH54	82	37.209	Saccharomyces_cerevisiae
ENSMLEG00000006946	-	100	94.286	ENSSBOG00000028501	-	100	94.286	Saimiri_boliviensis_boliviensis
ENSMLEG00000006946	-	99	74.753	ENSSHAG00000017038	-	99	74.753	Sarcophilus_harrisii
ENSMLEG00000006946	-	63	65.202	ENSSFOG00015008483	rad54b	88	65.202	Scleropages_formosus
ENSMLEG00000006946	-	99	53.010	ENSSMAG00000018659	rad54b	99	53.560	Scophthalmus_maximus
ENSMLEG00000006946	-	99	53.968	ENSSDUG00000001122	rad54b	98	53.968	Seriola_dumerili
ENSMLEG00000006946	-	99	53.838	ENSSLDG00000013787	rad54b	99	53.943	Seriola_lalandi_dorsalis
ENSMLEG00000006946	-	100	68.381	ENSSPUG00000016497	-	99	68.381	Sphenodon_punctatus
ENSMLEG00000006946	-	99	55.568	ENSSPAG00000012800	rad54b	99	55.568	Stegastes_partitus
ENSMLEG00000006946	-	100	85.149	ENSSSCG00000006101	-	99	88.360	Sus_scrofa
ENSMLEG00000006946	-	99	68.627	ENSTGUG00000011880	-	99	68.627	Taeniopygia_guttata
ENSMLEG00000006946	-	87	58.668	ENSTRUG00000010015	rad54b	99	53.059	Takifugu_rubripes
ENSMLEG00000006946	-	99	83.480	ENSTTRG00000006312	-	99	83.480	Tursiops_truncatus
ENSMLEG00000006946	-	99	86.923	ENSUMAG00000016401	-	99	86.923	Ursus_maritimus
ENSMLEG00000006946	-	99	84.454	ENSVPAG00000003157	-	99	84.454	Vicugna_pacos
ENSMLEG00000006946	-	99	54.486	ENSXETG00000025924	rad54b	99	59.500	Xenopus_tropicalis
ENSMLEG00000006946	-	99	54.595	ENSXMAG00000013141	rad54b	99	54.595	Xiphophorus_maculatus