EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000026141 (Gene tree)
Gene ID: 105546094
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 50458 bases
Position: chrKN973089.1:173737-224194
Accession: 105546094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000006208	SF3b1	PF08920.10	4.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000028694	SF3B1-201	3603	XM_011989190	ENSMLEP00000006208	1200 (aa)	XP_011844580	A0A2K5XSB4

Gene Model

Click here to download ENSMLEG00000026141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000026141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000026141	SF3B1	99	94.027	ENSG00000115524	SF3B1	94	97.788	Homo_sapiens
ENSMLEG00000026141	SF3B1	98	88.710	ENSAPOG00000011894	sf3b1	94	88.656	Acanthochromis_polyacanthus
ENSMLEG00000026141	SF3B1	99	93.952	ENSAMEG00000013809	SF3B1	95	93.403	Ailuropoda_melanoleuca
ENSMLEG00000026141	SF3B1	98	88.943	ENSACIG00000020910	sf3b1	91	88.521	Amphilophus_citrinellus
ENSMLEG00000026141	SF3B1	98	88.656	ENSAOCG00000004478	sf3b1	94	88.737	Amphiprion_ocellaris
ENSMLEG00000026141	SF3B1	98	88.656	ENSAPEG00000012937	sf3b1	94	88.737	Amphiprion_percula
ENSMLEG00000026141	SF3B1	98	88.719	ENSATEG00000020435	sf3b1	94	88.853	Anabas_testudineus
ENSMLEG00000026141	SF3B1	99	93.468	ENSAPLG00000003993	SF3B1	94	93.176	Anas_platyrhynchos
ENSMLEG00000026141	SF3B1	99	92.748	ENSACAG00000009612	SF3B1	94	92.451	Anolis_carolinensis
ENSMLEG00000026141	SF3B1	99	94.027	ENSANAG00000021577	SF3B1	100	93.023	Aotus_nancymaae
ENSMLEG00000026141	SF3B1	98	87.961	ENSACLG00000023470	sf3b1	94	88.084	Astatotilapia_calliptera
ENSMLEG00000026141	SF3B1	98	89.148	ENSAMXG00000002219	sf3b1	94	88.656	Astyanax_mexicanus
ENSMLEG00000026141	SF3B1	99	93.947	ENSBTAG00000008915	SF3B1	95	93.398	Bos_taurus
ENSMLEG00000026141	SF3B1	99	66.484	WBGene00011605	sftb-1	94	67.037	Caenorhabditis_elegans
ENSMLEG00000026141	SF3B1	99	94.027	ENSCJAG00000003902	SF3B1	95	93.478	Callithrix_jacchus
ENSMLEG00000026141	SF3B1	99	94.027	ENSCAFG00000010826	SF3B1	95	93.478	Canis_familiaris
ENSMLEG00000026141	SF3B1	99	94.027	ENSCAFG00020004750	SF3B1	95	93.478	Canis_lupus_dingo
ENSMLEG00000026141	SF3B1	99	93.947	ENSCHIG00000015226	SF3B1	96	93.398	Capra_hircus
ENSMLEG00000026141	SF3B1	99	93.947	ENSTSYG00000009214	SF3B1	95	93.398	Carlito_syrichta
ENSMLEG00000026141	SF3B1	99	94.027	ENSCAPG00000006547	SF3B1	95	93.478	Cavia_aperea
ENSMLEG00000026141	SF3B1	99	94.027	ENSCPOG00000009353	SF3B1	96	93.478	Cavia_porcellus
ENSMLEG00000026141	SF3B1	99	94.027	ENSCCAG00000020506	SF3B1	95	93.478	Cebus_capucinus
ENSMLEG00000026141	SF3B1	99	94.027	ENSCATG00000035735	SF3B1	95	93.478	Cercocebus_atys
ENSMLEG00000026141	SF3B1	99	94.027	ENSCLAG00000014767	SF3B1	95	93.478	Chinchilla_lanigera
ENSMLEG00000026141	SF3B1	99	94.027	ENSCSAG00000011505	SF3B1	95	93.478	Chlorocebus_sabaeus
ENSMLEG00000026141	SF3B1	77	96.154	ENSCHOG00000009860	SF3B1	71	96.154	Choloepus_hoffmanni
ENSMLEG00000026141	SF3B1	99	93.226	ENSCPBG00000021902	SF3B1	99	92.803	Chrysemys_picta_bellii
ENSMLEG00000026141	SF3B1	70	73.311	ENSCING00000002558	-	99	73.767	Ciona_intestinalis
ENSMLEG00000026141	SF3B1	99	80.033	ENSCSAVG00000002559	-	95	80.498	Ciona_savignyi
ENSMLEG00000026141	SF3B1	99	94.027	ENSCANG00000029415	SF3B1	95	93.478	Colobus_angolensis_palliatus
ENSMLEG00000026141	SF3B1	99	94.027	ENSCGRG00001016990	Sf3b1	95	93.478	Cricetulus_griseus_chok1gshd
ENSMLEG00000026141	SF3B1	99	94.027	ENSCGRG00000005301	Sf3b1	95	93.478	Cricetulus_griseus_crigri
ENSMLEG00000026141	SF3B1	98	85.956	ENSCSEG00000003860	sf3b1	94	85.530	Cynoglossus_semilaevis
ENSMLEG00000026141	SF3B1	94	89.301	ENSCVAG00000003680	sf3b1	94	88.730	Cyprinodon_variegatus
ENSMLEG00000026141	SF3B1	98	89.202	ENSDARG00000056138	sf3b1	94	88.691	Danio_rerio
ENSMLEG00000026141	SF3B1	99	93.952	ENSDNOG00000011754	SF3B1	95	93.403	Dasypus_novemcinctus
ENSMLEG00000026141	SF3B1	96	93.781	ENSDORG00000002399	Sf3b1	96	93.218	Dipodomys_ordii
ENSMLEG00000026141	SF3B1	98	76.531	FBgn0031266	Sf3b1	94	76.531	Drosophila_melanogaster
ENSMLEG00000026141	SF3B1	80	92.004	ENSETEG00000009188	SF3B1	94	91.339	Echinops_telfairi
ENSMLEG00000026141	SF3B1	99	88.328	ENSEBUG00000004325	sf3b1	100	90.063	Eptatretus_burgeri
ENSMLEG00000026141	SF3B1	99	93.947	ENSEASG00005020159	SF3B1	93	93.398	Equus_asinus_asinus
ENSMLEG00000026141	SF3B1	99	93.947	ENSECAG00000021657	SF3B1	93	93.398	Equus_caballus
ENSMLEG00000026141	SF3B1	82	100.000	ENSEEUG00000000836	SF3B1	75	100.000	Erinaceus_europaeus
ENSMLEG00000026141	SF3B1	98	88.099	ENSELUG00000005977	sf3b1	92	88.160	Esox_lucius
ENSMLEG00000026141	SF3B1	99	94.027	ENSFCAG00000005038	SF3B1	95	93.478	Felis_catus
ENSMLEG00000026141	SF3B1	99	93.548	ENSFALG00000004281	SF3B1	94	93.258	Ficedula_albicollis
ENSMLEG00000026141	SF3B1	99	94.027	ENSFDAG00000017510	SF3B1	95	93.478	Fukomys_damarensis
ENSMLEG00000026141	SF3B1	98	88.647	ENSFHEG00000014333	sf3b1	94	88.325	Fundulus_heteroclitus
ENSMLEG00000026141	SF3B1	98	88.880	ENSGMOG00000006773	sf3b1	94	88.691	Gadus_morhua
ENSMLEG00000026141	SF3B1	99	93.468	ENSGALG00000008038	SF3B1	94	93.176	Gallus_gallus
ENSMLEG00000026141	SF3B1	98	89.185	ENSGAFG00000000704	sf3b1	96	88.638	Gambusia_affinis
ENSMLEG00000026141	SF3B1	98	89.669	ENSGACG00000008839	sf3b1	94	88.934	Gasterosteus_aculeatus
ENSMLEG00000026141	SF3B1	99	93.226	ENSGAGG00000017478	SF3B1	94	92.933	Gopherus_agassizii
ENSMLEG00000026141	SF3B1	99	96.192	ENSGGOG00000009264	SF3B1	95	96.192	Gorilla_gorilla
ENSMLEG00000026141	SF3B1	98	88.023	ENSHBUG00000007705	sf3b1	94	88.145	Haplochromis_burtoni
ENSMLEG00000026141	SF3B1	99	94.027	ENSHGLG00000008285	-	95	93.478	Heterocephalus_glaber_female
ENSMLEG00000026141	SF3B1	98	91.863	ENSHGLG00100005535	-	95	91.385	Heterocephalus_glaber_male
ENSMLEG00000026141	SF3B1	98	88.029	ENSHCOG00000016775	sf3b1	94	88.391	Hippocampus_comes
ENSMLEG00000026141	SF3B1	98	90.383	ENSIPUG00000013171	sf3b1	94	90.433	Ictalurus_punctatus
ENSMLEG00000026141	SF3B1	99	94.027	ENSSTOG00000011034	SF3B1	95	93.478	Ictidomys_tridecemlineatus
ENSMLEG00000026141	SF3B1	99	93.947	ENSJJAG00000010903	Sf3b1	96	93.398	Jaculus_jaculus
ENSMLEG00000026141	SF3B1	99	88.437	ENSKMAG00000004009	sf3b1	94	88.325	Kryptolebias_marmoratus
ENSMLEG00000026141	SF3B1	98	89.644	ENSLBEG00000022208	sf3b1	94	89.069	Labrus_bergylta
ENSMLEG00000026141	SF3B1	99	87.290	ENSLACG00000014832	SF3B1	94	87.571	Latimeria_chalumnae
ENSMLEG00000026141	SF3B1	98	90.128	ENSLOCG00000003899	sf3b1	94	89.686	Lepisosteus_oculatus
ENSMLEG00000026141	SF3B1	99	94.027	ENSLAFG00000001956	SF3B1	95	93.478	Loxodonta_africana
ENSMLEG00000026141	SF3B1	99	94.027	ENSMMUG00000022430	SF3B1	95	93.478	Macaca_mulatta
ENSMLEG00000026141	SF3B1	99	94.027	ENSMNEG00000042333	SF3B1	100	93.023	Macaca_nemestrina
ENSMLEG00000026141	SF3B1	98	89.627	ENSMAMG00000010241	sf3b1	94	89.482	Mastacembelus_armatus
ENSMLEG00000026141	SF3B1	98	87.961	ENSMZEG00005021254	sf3b1	94	88.084	Maylandia_zebra
ENSMLEG00000026141	SF3B1	99	93.468	ENSMGAG00000007017	SF3B1	95	93.176	Meleagris_gallopavo
ENSMLEG00000026141	SF3B1	98	89.504	ENSMAUG00000009071	Sf3b1	94	88.961	Mesocricetus_auratus
ENSMLEG00000026141	SF3B1	99	93.947	ENSMICG00000013879	SF3B1	95	93.398	Microcebus_murinus
ENSMLEG00000026141	SF3B1	99	89.427	ENSMOCG00000000455	Sf3b1	95	88.889	Microtus_ochrogaster
ENSMLEG00000026141	SF3B1	80	88.420	ENSMMOG00000000475	sf3b1	93	87.843	Mola_mola
ENSMLEG00000026141	SF3B1	99	93.462	ENSMODG00000012275	SF3B1	95	92.915	Monodelphis_domestica
ENSMLEG00000026141	SF3B1	98	88.728	ENSMALG00000017211	sf3b1	94	88.853	Monopterus_albus
ENSMLEG00000026141	SF3B1	99	94.027	MGP_CAROLIEiJ_G0014141	Sf3b1	95	93.478	Mus_caroli
ENSMLEG00000026141	SF3B1	99	94.027	ENSMUSG00000025982	Sf3b1	95	93.478	Mus_musculus
ENSMLEG00000026141	SF3B1	99	94.027	MGP_SPRETEiJ_G0014947	Sf3b1	95	93.478	Mus_spretus
ENSMLEG00000026141	SF3B1	99	94.027	ENSMPUG00000007799	SF3B1	95	93.478	Mustela_putorius_furo
ENSMLEG00000026141	SF3B1	98	92.677	ENSMLUG00000000840	SF3B1	95	92.190	Myotis_lucifugus
ENSMLEG00000026141	SF3B1	99	94.027	ENSNGAG00000021884	-	95	93.478	Nannospalax_galili
ENSMLEG00000026141	SF3B1	93	89.012	ENSNBRG00000015816	sf3b1	91	88.370	Neolamprologus_brichardi
ENSMLEG00000026141	SF3B1	99	94.027	ENSNLEG00000006861	SF3B1	95	93.478	Nomascus_leucogenys
ENSMLEG00000026141	SF3B1	68	100.000	ENSMEUG00000015848	-	66	100.000	Notamacropus_eugenii
ENSMLEG00000026141	SF3B1	96	83.306	ENSOPRG00000008596	SF3B1	88	93.214	Ochotona_princeps
ENSMLEG00000026141	SF3B1	99	94.027	ENSODEG00000011153	-	95	93.478	Octodon_degus
ENSMLEG00000026141	SF3B1	98	87.961	ENSONIG00000013758	sf3b1	94	88.084	Oreochromis_niloticus
ENSMLEG00000026141	SF3B1	88	94.156	ENSOCUG00000012722	-	95	94.156	Oryctolagus_cuniculus
ENSMLEG00000026141	SF3B1	98	89.104	ENSORLG00000020219	sf3b1	94	88.647	Oryzias_latipes
ENSMLEG00000026141	SF3B1	98	89.104	ENSORLG00020001746	sf3b1	94	88.647	Oryzias_latipes_hni
ENSMLEG00000026141	SF3B1	59	84.121	ENSORLG00015001759	sf3b1	89	83.290	Oryzias_latipes_hsok
ENSMLEG00000026141	SF3B1	98	88.406	ENSOMEG00000019231	sf3b1	94	88.567	Oryzias_melastigma
ENSMLEG00000026141	SF3B1	99	93.947	ENSOARG00000015374	SF3B1	95	93.398	Ovis_aries
ENSMLEG00000026141	SF3B1	99	94.027	ENSPPAG00000035007	SF3B1	95	93.478	Pan_paniscus
ENSMLEG00000026141	SF3B1	99	94.027	ENSPPRG00000009090	SF3B1	95	93.478	Panthera_pardus
ENSMLEG00000026141	SF3B1	99	94.027	ENSPTIG00000021557	SF3B1	95	93.478	Panthera_tigris_altaica
ENSMLEG00000026141	SF3B1	98	90.315	ENSPTRG00000012771	SF3B1	94	90.315	Pan_troglodytes
ENSMLEG00000026141	SF3B1	99	94.027	ENSPANG00000013417	SF3B1	95	93.478	Papio_anubis
ENSMLEG00000026141	SF3B1	98	90.330	ENSPKIG00000000784	sf3b1	95	89.520	Paramormyrops_kingsleyae
ENSMLEG00000026141	SF3B1	98	93.929	ENSPSIG00000017222	SF3B1	94	93.909	Pelodiscus_sinensis
ENSMLEG00000026141	SF3B1	88	89.658	ENSPMGG00000004330	sf3b1	92	89.019	Periophthalmus_magnuspinnatus
ENSMLEG00000026141	SF3B1	99	94.027	ENSPEMG00000010699	Sf3b1	96	93.478	Peromyscus_maniculatus_bairdii
ENSMLEG00000026141	SF3B1	99	85.840	ENSPMAG00000001311	sf3b1	94	86.003	Petromyzon_marinus
ENSMLEG00000026141	SF3B1	99	93.462	ENSPCIG00000010642	SF3B1	95	92.915	Phascolarctos_cinereus
ENSMLEG00000026141	SF3B1	98	89.113	ENSPFOG00000000073	sf3b1	94	88.567	Poecilia_formosa
ENSMLEG00000026141	SF3B1	98	88.585	ENSPLAG00000002293	sf3b1	94	88.638	Poecilia_latipinna
ENSMLEG00000026141	SF3B1	98	89.185	ENSPMEG00000000446	sf3b1	92	88.638	Poecilia_mexicana
ENSMLEG00000026141	SF3B1	98	88.647	ENSPREG00000019652	sf3b1	94	88.719	Poecilia_reticulata
ENSMLEG00000026141	SF3B1	88	94.991	ENSPPYG00000013044	SF3B1	94	94.991	Pongo_abelii
ENSMLEG00000026141	SF3B1	99	93.866	ENSPCAG00000009292	SF3B1	95	93.317	Procavia_capensis
ENSMLEG00000026141	SF3B1	99	93.947	ENSPCOG00000024074	SF3B1	95	93.398	Propithecus_coquereli
ENSMLEG00000026141	SF3B1	99	94.027	ENSPVAG00000008302	SF3B1	95	93.478	Pteropus_vampyrus
ENSMLEG00000026141	SF3B1	98	87.961	ENSPNYG00000014939	sf3b1	94	88.084	Pundamilia_nyererei
ENSMLEG00000026141	SF3B1	98	89.050	ENSPNAG00000008288	sf3b1	94	88.728	Pygocentrus_nattereri
ENSMLEG00000026141	SF3B1	99	94.027	ENSRNOG00000013516	Sf3b1	95	93.478	Rattus_norvegicus
ENSMLEG00000026141	SF3B1	98	90.236	ENSRBIG00000026096	SF3B1	95	89.775	Rhinopithecus_bieti
ENSMLEG00000026141	SF3B1	99	94.027	ENSRROG00000031308	SF3B1	95	93.478	Rhinopithecus_roxellana
ENSMLEG00000026141	SF3B1	99	94.027	ENSSBOG00000020080	SF3B1	95	93.478	Saimiri_boliviensis_boliviensis
ENSMLEG00000026141	SF3B1	99	93.462	ENSSHAG00000017564	SF3B1	95	92.915	Sarcophilus_harrisii
ENSMLEG00000026141	SF3B1	98	90.169	ENSSFOG00015021535	sf3b1	94	89.911	Scleropages_formosus
ENSMLEG00000026141	SF3B1	98	88.835	ENSSMAG00000013977	sf3b1	93	88.424	Scophthalmus_maximus
ENSMLEG00000026141	SF3B1	98	88.647	ENSSDUG00000017422	sf3b1	94	88.799	Seriola_dumerili
ENSMLEG00000026141	SF3B1	98	88.567	ENSSLDG00000019495	sf3b1	94	88.719	Seriola_lalandi_dorsalis
ENSMLEG00000026141	SF3B1	82	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSMLEG00000026141	SF3B1	99	93.065	ENSSPUG00000000410	SF3B1	94	92.851	Sphenodon_punctatus
ENSMLEG00000026141	SF3B1	98	88.808	ENSSPAG00000010451	sf3b1	93	88.808	Stegastes_partitus
ENSMLEG00000026141	SF3B1	92	93.610	ENSSSCG00000016075	SF3B1	100	93.023	Sus_scrofa
ENSMLEG00000026141	SF3B1	99	93.387	ENSTGUG00000010553	SF3B1	94	93.095	Taeniopygia_guttata
ENSMLEG00000026141	SF3B1	98	89.050	ENSTRUG00000015534	sf3b1	94	88.558	Takifugu_rubripes
ENSMLEG00000026141	SF3B1	83	100.000	ENSTBEG00000008714	SF3B1	86	100.000	Tupaia_belangeri
ENSMLEG00000026141	SF3B1	88	94.185	ENSTTRG00000003414	SF3B1	85	94.185	Tursiops_truncatus
ENSMLEG00000026141	SF3B1	81	99.190	ENSUAMG00000018506	SF3B1	93	99.190	Ursus_americanus
ENSMLEG00000026141	SF3B1	99	94.027	ENSUMAG00000020945	SF3B1	95	93.478	Ursus_maritimus
ENSMLEG00000026141	SF3B1	92	100.000	ENSVPAG00000005798	SF3B1	85	100.000	Vicugna_pacos
ENSMLEG00000026141	SF3B1	99	94.027	ENSVVUG00000025948	SF3B1	90	93.478	Vulpes_vulpes
ENSMLEG00000026141	SF3B1	98	91.396	ENSXETG00000013339	sf3b1	94	91.294	Xenopus_tropicalis
ENSMLEG00000026141	SF3B1	98	90.025	ENSXCOG00000018086	sf3b1	94	90.025	Xiphophorus_couchianus
ENSMLEG00000026141	SF3B1	98	88.567	ENSXMAG00000007369	sf3b1	94	88.971	Xiphophorus_maculatus