EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000026740 (Gene tree)
Gene ID: 105539083
Gene Symbol: -
Alias: -
Full Name: chromosome unknown open reading frame%2C human C17orf47
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 24321 bases
Position: chrKN974096.1:3569312-3593632
Accession: 105539083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000006867	MMR_HSR1	PF01926.23	4.4e-07	1	1
ENSMLEP00000006836	MMR_HSR1	PF01926.23	4.9e-07	1	1
ENSMLEP00000006814	MMR_HSR1	PF01926.23	5.9e-07	1	1
ENSMLEP00000006844	MMR_HSR1	PF01926.23	9.6e-07	1	1
ENSMLEP00000006793	MMR_HSR1	PF01926.23	9.8e-07	1	1
ENSMLEP00000006832	MMR_HSR1	PF01926.23	1e-06	1	1
ENSMLEP00000006805	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSMLEP00000006785	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSMLEP00000006780	MMR_HSR1	PF01926.23	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000030114	-	906	-	ENSMLEP00000006867	301 (aa)	-	A0A2K5XUA3
ENSMLET00000030034	-	1695	XM_011979192	ENSMLEP00000006793	470 (aa)	XP_011834582	A0A2K5XTZ0
ENSMLET00000029363	-	1919	XM_011979195	ENSMLEP00000006462	570 (aa)	XP_011834585	A0A2K5XT19
ENSMLET00000030078	-	1416	-	ENSMLEP00000006832	471 (aa)	-	A0A2K5XU64
ENSMLET00000030021	-	2958	-	ENSMLEP00000006780	985 (aa)	-	A0A2K5XU28
ENSMLET00000030082	-	2316	XM_011979194	ENSMLEP00000006836	354 (aa)	XP_011834584	A0A2K5XU52
ENSMLET00000030027	-	1798	XM_011979189	ENSMLEP00000006785	493 (aa)	XP_011834579	A0A2K5XU32
ENSMLET00000030090	-	1380	-	ENSMLEP00000006844	459 (aa)	-	A0A2K5XU61
ENSMLET00000030048	-	2020	XM_011979190	ENSMLEP00000006805	478 (aa)	XP_011834580	A0A2K5XU49
ENSMLET00000030059	-	1447	XM_011979193	ENSMLEP00000006814	379 (aa)	XP_011834583	A0A2K5XU25

Gene Model

Click here to download ENSMLEG00000026740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000026740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000026740	-	95	82.105	ENSMLEG00000029088	-	99	77.871
ENSMLEG00000026740	-	99	57.525	ENSMLEG00000039481	SEPT1	85	59.331
ENSMLEG00000026740	-	91	46.350	ENSMLEG00000019167	SEPT12	83	43.770
ENSMLEG00000026740	-	93	43.772	ENSMLEG00000041438	SEPT11	68	44.027
ENSMLEG00000026740	-	95	58.947	ENSMLEG00000040086	-	73	59.091
ENSMLEG00000026740	-	93	44.326	ENSMLEG00000030428	SEPT6	68	44.558
ENSMLEG00000026740	-	99	64.646	ENSMLEG00000043469	SEPT2	91	60.795
ENSMLEG00000026740	-	93	43.772	ENSMLEG00000044191	SEPT8	71	43.042
ENSMLEG00000026740	-	93	37.234	ENSMLEG00000032329	SEPT14	94	35.849
ENSMLEG00000026740	-	93	49.822	ENSMLEG00000030788	SEPT9	90	49.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000026740	-	100	98.023	ENSCAFG00000017532	SEPT4	99	98.050	Canis_familiaris
ENSMLEG00000026740	-	100	100.000	ENSCATG00000032851	-	100	100.000	Cercocebus_atys
ENSMLEG00000026740	-	100	98.023	ENSECAG00000020248	-	100	97.361	Equus_caballus
ENSMLEG00000026740	-	100	100.000	ENSGGOG00000013814	-	100	100.000	Gorilla_gorilla
ENSMLEG00000026740	-	100	100.000	ENSMFAG00000038431	SEPT4	100	100.000	Macaca_fascicularis
ENSMLEG00000026740	-	100	100.000	ENSMMUG00000008423	-	100	100.000	Macaca_mulatta
ENSMLEG00000026740	-	100	100.000	ENSMNEG00000036497	-	100	100.000	Macaca_nemestrina
ENSMLEG00000026740	-	100	97.458	ENSMPUG00000015285	-	100	74.656	Mustela_putorius_furo
ENSMLEG00000026740	-	100	100.000	ENSNLEG00000008245	-	100	100.000	Nomascus_leucogenys
ENSMLEG00000026740	-	100	96.893	ENSOARG00000010822	-	100	71.358	Ovis_aries
ENSMLEG00000026740	-	100	99.736	ENSPPAG00000028255	-	100	99.736	Pan_paniscus
ENSMLEG00000026740	-	100	99.736	ENSPTRG00000009455	SEPT4	100	99.736	Pan_troglodytes