EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000028318 (Gene tree)
Gene ID: 105550216
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrKN976950.1:1807095-1808243
Accession: 105550216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000008288	RRM_5	PF13893.6	4.8e-13	1	2
ENSMLEP00000008288	RRM_5	PF13893.6	4.8e-13	2	2
ENSMLEP00000008288	RRM_1	PF00076.22	3.3e-77	1	4
ENSMLEP00000008288	RRM_1	PF00076.22	3.3e-77	2	4
ENSMLEP00000008288	RRM_1	PF00076.22	3.3e-77	3	4
ENSMLEP00000008288	RRM_1	PF00076.22	3.3e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000031670	PABPC5-201	1149	XM_011995096	ENSMLEP00000008288	382 (aa)	XP_011850486	A0A2K5XY95

Gene Model

Click here to download ENSMLEG00000028318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000028318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000028318	PABPC5	91	47.110	ENSMLEG00000041649	-	65	46.821
ENSMLEG00000028318	PABPC5	70	33.333	ENSMLEG00000012695	-	52	33.333
ENSMLEG00000028318	PABPC5	83	32.335	ENSMLEG00000042452	NONO	51	33.333
ENSMLEG00000028318	PABPC5	96	61.983	ENSMLEG00000042214	PABPC3	58	62.079
ENSMLEG00000028318	PABPC5	64	30.357	ENSMLEG00000015649	TRNAU1AP	55	30.061
ENSMLEG00000028318	PABPC5	93	59.694	ENSMLEG00000027495	-	98	59.375
ENSMLEG00000028318	PABPC5	96	66.942	ENSMLEG00000040716	PABPC4	60	67.135
ENSMLEG00000028318	PABPC5	98	53.191	ENSMLEG00000043225	-	60	53.740
ENSMLEG00000028318	PABPC5	96	59.504	ENSMLEG00000043139	PABPC1L	61	59.551
ENSMLEG00000028318	PABPC5	95	65.033	ENSMLEG00000027792	-	63	65.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000028318	PABPC5	100	99.738	ENSG00000174740	PABPC5	100	99.738	Homo_sapiens
ENSMLEG00000028318	PABPC5	99	97.375	ENSAMEG00000020114	PABPC5	100	97.375	Ailuropoda_melanoleuca
ENSMLEG00000028318	PABPC5	100	99.738	ENSANAG00000005063	PABPC5	100	99.738	Aotus_nancymaae
ENSMLEG00000028318	PABPC5	99	96.588	ENSBTAG00000019942	PABPC5	99	96.588	Bos_taurus
ENSMLEG00000028318	PABPC5	100	99.215	ENSCJAG00000003665	PABPC5	100	99.215	Callithrix_jacchus
ENSMLEG00000028318	PABPC5	99	96.850	ENSCAFG00000017452	PABPC5	99	96.850	Canis_familiaris
ENSMLEG00000028318	PABPC5	99	96.588	ENSCHIG00000019004	PABPC5	99	96.588	Capra_hircus
ENSMLEG00000028318	PABPC5	99	97.638	ENSTSYG00000036351	PABPC5	99	97.638	Carlito_syrichta
ENSMLEG00000028318	PABPC5	99	88.421	ENSCAPG00000010714	PABPC5	99	88.421	Cavia_aperea
ENSMLEG00000028318	PABPC5	99	94.488	ENSCPOG00000002555	PABPC5	99	94.488	Cavia_porcellus
ENSMLEG00000028318	PABPC5	100	99.738	ENSCCAG00000032154	PABPC5	100	99.738	Cebus_capucinus
ENSMLEG00000028318	PABPC5	100	100.000	ENSCATG00000043083	PABPC5	100	100.000	Cercocebus_atys
ENSMLEG00000028318	PABPC5	99	95.801	ENSCLAG00000000647	PABPC5	99	95.801	Chinchilla_lanigera
ENSMLEG00000028318	PABPC5	100	100.000	ENSCSAG00000000065	PABPC5	100	100.000	Chlorocebus_sabaeus
ENSMLEG00000028318	PABPC5	100	100.000	ENSCANG00000011473	PABPC5	100	100.000	Colobus_angolensis_palliatus
ENSMLEG00000028318	PABPC5	99	94.488	ENSCGRG00000018699	Pabpc5	99	94.488	Cricetulus_griseus_crigri
ENSMLEG00000028318	PABPC5	99	78.534	ENSETEG00000011832	PABPC5	99	78.534	Echinops_telfairi
ENSMLEG00000028318	PABPC5	99	97.375	ENSEASG00005014396	PABPC5	99	97.375	Equus_asinus_asinus
ENSMLEG00000028318	PABPC5	99	97.375	ENSECAG00000003452	PABPC5	99	97.375	Equus_caballus
ENSMLEG00000028318	PABPC5	99	97.113	ENSFCAG00000004998	PABPC5	99	97.113	Felis_catus
ENSMLEG00000028318	PABPC5	99	96.325	ENSFDAG00000000126	PABPC5	99	96.325	Fukomys_damarensis
ENSMLEG00000028318	PABPC5	100	99.738	ENSGGOG00000007622	PABPC5	100	99.738	Gorilla_gorilla
ENSMLEG00000028318	PABPC5	95	97.235	ENSJJAG00000011960	Pabpc5	99	97.235	Jaculus_jaculus
ENSMLEG00000028318	PABPC5	100	100.000	ENSMFAG00000024561	PABPC5	100	100.000	Macaca_fascicularis
ENSMLEG00000028318	PABPC5	100	100.000	ENSMMUG00000011562	PABPC5	100	100.000	Macaca_mulatta
ENSMLEG00000028318	PABPC5	100	100.000	ENSMNEG00000037604	PABPC5	100	100.000	Macaca_nemestrina
ENSMLEG00000028318	PABPC5	99	96.325	ENSMICG00000041706	PABPC5	99	96.325	Microcebus_murinus
ENSMLEG00000028318	PABPC5	99	95.801	ENSMOCG00000001554	Pabpc5	99	95.801	Microtus_ochrogaster
ENSMLEG00000028318	PABPC5	99	94.723	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.723	Mus_caroli
ENSMLEG00000028318	PABPC5	99	95.251	ENSMUSG00000034732	Pabpc5	99	95.251	Mus_musculus
ENSMLEG00000028318	PABPC5	99	95.538	MGP_PahariEiJ_G0031908	Pabpc5	99	95.538	Mus_pahari
ENSMLEG00000028318	PABPC5	99	95.251	MGP_SPRETEiJ_G0034533	Pabpc5	99	95.251	Mus_spretus
ENSMLEG00000028318	PABPC5	99	96.588	ENSMPUG00000018465	PABPC5	99	96.588	Mustela_putorius_furo
ENSMLEG00000028318	PABPC5	99	96.063	ENSMLUG00000008244	PABPC5	99	96.063	Myotis_lucifugus
ENSMLEG00000028318	PABPC5	95	96.313	ENSNGAG00000004371	Pabpc5	99	96.313	Nannospalax_galili
ENSMLEG00000028318	PABPC5	100	99.738	ENSNLEG00000035086	PABPC5	100	99.738	Nomascus_leucogenys
ENSMLEG00000028318	PABPC5	98	97.285	ENSOPRG00000000856	PABPC5	100	97.285	Ochotona_princeps
ENSMLEG00000028318	PABPC5	99	97.638	ENSOCUG00000010919	PABPC5	99	97.638	Oryctolagus_cuniculus
ENSMLEG00000028318	PABPC5	99	96.850	ENSOGAG00000006882	PABPC5	99	96.850	Otolemur_garnettii
ENSMLEG00000028318	PABPC5	99	96.850	ENSOARG00000010260	PABPC5	99	96.850	Ovis_aries
ENSMLEG00000028318	PABPC5	100	99.476	ENSPPAG00000007378	PABPC5	100	99.476	Pan_paniscus
ENSMLEG00000028318	PABPC5	99	97.113	ENSPPRG00000010742	PABPC5	99	97.113	Panthera_pardus
ENSMLEG00000028318	PABPC5	99	97.113	ENSPTIG00000001480	PABPC5	99	97.113	Panthera_tigris_altaica
ENSMLEG00000028318	PABPC5	100	99.738	ENSPTRG00000022078	PABPC5	100	99.738	Pan_troglodytes
ENSMLEG00000028318	PABPC5	100	100.000	ENSPANG00000018282	PABPC5	100	100.000	Papio_anubis
ENSMLEG00000028318	PABPC5	99	95.276	ENSPEMG00000000171	Pabpc5	99	95.276	Peromyscus_maniculatus_bairdii
ENSMLEG00000028318	PABPC5	100	99.738	ENSPPYG00000020526	PABPC5	100	99.738	Pongo_abelii
ENSMLEG00000028318	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSMLEG00000028318	PABPC5	99	97.113	ENSPCOG00000000676	PABPC5	99	97.113	Propithecus_coquereli
ENSMLEG00000028318	PABPC5	99	97.113	ENSPVAG00000006465	PABPC5	99	97.113	Pteropus_vampyrus
ENSMLEG00000028318	PABPC5	99	95.801	ENSRNOG00000003354	Pabpc5	99	95.801	Rattus_norvegicus
ENSMLEG00000028318	PABPC5	100	100.000	ENSRBIG00000011760	PABPC5	100	100.000	Rhinopithecus_bieti
ENSMLEG00000028318	PABPC5	100	100.000	ENSRROG00000036708	PABPC5	100	100.000	Rhinopithecus_roxellana
ENSMLEG00000028318	PABPC5	100	99.476	ENSSBOG00000008658	PABPC5	100	99.476	Saimiri_boliviensis_boliviensis
ENSMLEG00000028318	PABPC5	99	94.488	ENSSARG00000014012	PABPC5	99	94.488	Sorex_araneus
ENSMLEG00000028318	PABPC5	99	97.113	ENSSSCG00000040194	PABPC5	99	97.113	Sus_scrofa
ENSMLEG00000028318	PABPC5	99	98.425	ENSTBEG00000016482	PABPC5	99	98.425	Tupaia_belangeri
ENSMLEG00000028318	PABPC5	99	96.850	ENSUAMG00000013627	PABPC5	99	96.850	Ursus_americanus
ENSMLEG00000028318	PABPC5	99	96.588	ENSUMAG00000023934	PABPC5	99	96.588	Ursus_maritimus
ENSMLEG00000028318	PABPC5	99	97.113	ENSVPAG00000001063	PABPC5	99	97.113	Vicugna_pacos
ENSMLEG00000028318	PABPC5	99	97.113	ENSVVUG00000013172	PABPC5	99	97.113	Vulpes_vulpes