EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000029040 (Gene tree)
Gene ID: 105550854
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 441984 bases
Position: chrKN977250.1:6920350-7362333
Accession: 105550854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000010337	TUDOR	PF00567.24	6.5e-28	1	1
ENSMLEP00000010335	TUDOR	PF00567.24	6.5e-28	1	1
ENSMLEP00000010321	TUDOR	PF00567.24	6.9e-28	1	1
ENSMLEP00000010337	SNase	PF00565.17	2.4e-69	1	5
ENSMLEP00000010337	SNase	PF00565.17	2.4e-69	2	5
ENSMLEP00000010337	SNase	PF00565.17	2.4e-69	3	5
ENSMLEP00000010337	SNase	PF00565.17	2.4e-69	4	5
ENSMLEP00000010337	SNase	PF00565.17	2.4e-69	5	5
ENSMLEP00000010335	SNase	PF00565.17	2.4e-69	1	5
ENSMLEP00000010335	SNase	PF00565.17	2.4e-69	2	5
ENSMLEP00000010335	SNase	PF00565.17	2.4e-69	3	5
ENSMLEP00000010335	SNase	PF00565.17	2.4e-69	4	5
ENSMLEP00000010335	SNase	PF00565.17	2.4e-69	5	5
ENSMLEP00000010321	SNase	PF00565.17	2.8e-69	1	5
ENSMLEP00000010321	SNase	PF00565.17	2.8e-69	2	5
ENSMLEP00000010321	SNase	PF00565.17	2.8e-69	3	5
ENSMLEP00000010321	SNase	PF00565.17	2.8e-69	4	5
ENSMLEP00000010321	SNase	PF00565.17	2.8e-69	5	5
ENSMLEP00000010354	SNase	PF00565.17	1.6e-48	1	3
ENSMLEP00000010354	SNase	PF00565.17	1.6e-48	2	3
ENSMLEP00000010354	SNase	PF00565.17	1.6e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000033747	SND1-202	2664	-	ENSMLEP00000010335	887 (aa)	-	A0A2K5Y487
ENSMLET00000033733	SND1-201	3728	XM_011995923	ENSMLEP00000010321	910 (aa)	XP_011851313	A0A2K5Y434
ENSMLET00000033766	SND1-204	1752	-	ENSMLEP00000010354	583 (aa)	-	A0A2K5Y460
ENSMLET00000033749	SND1-203	2658	-	ENSMLEP00000010337	885 (aa)	-	A0A2K5Y448

Gene Model

Click here to download ENSMLEG00000029040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000029040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000029040	SND1	100	99.548	ENSG00000197157	SND1	100	99.451	Homo_sapiens
ENSMLEG00000029040	SND1	100	84.893	ENSAPOG00000017599	snd1	99	84.650	Acanthochromis_polyacanthus
ENSMLEG00000029040	SND1	100	98.985	ENSAMEG00000004664	SND1	94	98.904	Ailuropoda_melanoleuca
ENSMLEG00000029040	SND1	100	82.054	ENSACIG00000003551	snd1	99	81.960	Amphilophus_citrinellus
ENSMLEG00000029040	SND1	100	84.667	ENSAOCG00000014166	snd1	99	84.427	Amphiprion_ocellaris
ENSMLEG00000029040	SND1	100	84.667	ENSAPEG00000007067	snd1	99	84.427	Amphiprion_percula
ENSMLEG00000029040	SND1	97	87.831	ENSATEG00000018475	snd1	88	84.151	Anabas_testudineus
ENSMLEG00000029040	SND1	100	99.231	ENSANAG00000034463	SND1	100	99.231	Aotus_nancymaae
ENSMLEG00000029040	SND1	100	84.329	ENSACLG00000022897	snd1	99	84.076	Astatotilapia_calliptera
ENSMLEG00000029040	SND1	100	84.927	ENSAMXG00000016318	snd1	98	84.855	Astyanax_mexicanus
ENSMLEG00000029040	SND1	100	98.791	ENSBTAG00000010692	SND1	100	98.791	Bos_taurus
ENSMLEG00000029040	SND1	97	51.916	WBGene00006626	tsn-1	98	47.149	Caenorhabditis_elegans
ENSMLEG00000029040	SND1	100	99.011	ENSCJAG00000017668	SND1	100	99.011	Callithrix_jacchus
ENSMLEG00000029040	SND1	100	99.435	ENSCAFG00000001700	SND1	100	99.341	Canis_familiaris
ENSMLEG00000029040	SND1	100	99.435	ENSCAFG00020021639	SND1	100	99.341	Canis_lupus_dingo
ENSMLEG00000029040	SND1	100	99.121	ENSCHIG00000023390	SND1	100	99.121	Capra_hircus
ENSMLEG00000029040	SND1	97	99.469	ENSTSYG00000004979	SND1	97	99.469	Carlito_syrichta
ENSMLEG00000029040	SND1	99	85.327	ENSCAPG00000010677	SND1	98	84.598	Cavia_aperea
ENSMLEG00000029040	SND1	100	98.022	ENSCPOG00000006251	SND1	100	98.022	Cavia_porcellus
ENSMLEG00000029040	SND1	100	99.341	ENSCCAG00000036847	SND1	100	99.341	Cebus_capucinus
ENSMLEG00000029040	SND1	100	99.890	ENSCATG00000035214	SND1	100	99.890	Cercocebus_atys
ENSMLEG00000029040	SND1	100	98.192	ENSCLAG00000011796	SND1	100	98.132	Chinchilla_lanigera
ENSMLEG00000029040	SND1	100	99.890	ENSCSAG00000010182	SND1	100	99.890	Chlorocebus_sabaeus
ENSMLEG00000029040	SND1	97	73.982	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSMLEG00000029040	SND1	100	93.333	ENSCPBG00000018094	SND1	98	93.274	Chrysemys_picta_bellii
ENSMLEG00000029040	SND1	96	61.780	ENSCING00000000524	-	98	57.032	Ciona_intestinalis
ENSMLEG00000029040	SND1	97	62.982	ENSCSAVG00000008807	-	99	58.343	Ciona_savignyi
ENSMLEG00000029040	SND1	100	99.890	ENSCANG00000035119	SND1	100	99.890	Colobus_angolensis_palliatus
ENSMLEG00000029040	SND1	100	97.175	ENSCGRG00001022514	Snd1	100	97.143	Cricetulus_griseus_chok1gshd
ENSMLEG00000029040	SND1	99	97.172	ENSCGRG00000012277	Snd1	99	97.172	Cricetulus_griseus_crigri
ENSMLEG00000029040	SND1	97	87.654	ENSCSEG00000008661	snd1	98	84.564	Cynoglossus_semilaevis
ENSMLEG00000029040	SND1	97	88.536	ENSCVAG00000010316	snd1	100	83.678	Cyprinodon_variegatus
ENSMLEG00000029040	SND1	100	85.811	ENSDARG00000006766	snd1	97	87.590	Danio_rerio
ENSMLEG00000029040	SND1	100	96.054	ENSDNOG00000006795	SND1	100	96.054	Dasypus_novemcinctus
ENSMLEG00000029040	SND1	100	98.681	ENSDORG00000000336	Snd1	100	98.681	Dipodomys_ordii
ENSMLEG00000029040	SND1	97	53.754	FBgn0035121	Tudor-SN	98	50.703	Drosophila_melanogaster
ENSMLEG00000029040	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSMLEG00000029040	SND1	93	67.302	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSMLEG00000029040	SND1	100	97.516	ENSEASG00005008513	SND1	100	97.516	Equus_asinus_asinus
ENSMLEG00000029040	SND1	100	99.121	ENSECAG00000011451	SND1	100	99.121	Equus_caballus
ENSMLEG00000029040	SND1	97	97.168	ENSEEUG00000014737	SND1	100	86.923	Erinaceus_europaeus
ENSMLEG00000029040	SND1	99	83.315	ENSELUG00000001805	snd1	95	83.166	Esox_lucius
ENSMLEG00000029040	SND1	100	99.209	ENSFCAG00000008289	SND1	100	99.121	Felis_catus
ENSMLEG00000029040	SND1	100	98.418	ENSFDAG00000015881	SND1	100	98.352	Fukomys_damarensis
ENSMLEG00000029040	SND1	97	88.007	ENSFHEG00000004093	snd1	97	84.866	Fundulus_heteroclitus
ENSMLEG00000029040	SND1	64	74.859	ENSGMOG00000018932	snd1	64	74.859	Gadus_morhua
ENSMLEG00000029040	SND1	56	93.478	ENSGALG00000052684	-	50	93.583	Gallus_gallus
ENSMLEG00000029040	SND1	100	85.231	ENSGAFG00000008421	snd1	99	85.214	Gambusia_affinis
ENSMLEG00000029040	SND1	100	54.018	ENSGACG00000019793	snd1	98	54.204	Gasterosteus_aculeatus
ENSMLEG00000029040	SND1	100	99.670	ENSGGOG00000009614	SND1	100	99.670	Gorilla_gorilla
ENSMLEG00000029040	SND1	100	84.329	ENSHBUG00000019135	snd1	99	84.076	Haplochromis_burtoni
ENSMLEG00000029040	SND1	100	98.022	ENSHGLG00000003618	SND1	100	98.022	Heterocephalus_glaber_female
ENSMLEG00000029040	SND1	100	97.966	ENSHGLG00100012449	SND1	100	97.569	Heterocephalus_glaber_male
ENSMLEG00000029040	SND1	97	87.302	ENSHCOG00000005266	snd1	98	83.893	Hippocampus_comes
ENSMLEG00000029040	SND1	97	87.346	ENSIPUG00000013279	snd1	98	83.630	Ictalurus_punctatus
ENSMLEG00000029040	SND1	100	98.681	ENSSTOG00000002140	SND1	100	98.681	Ictidomys_tridecemlineatus
ENSMLEG00000029040	SND1	100	98.791	ENSJJAG00000009561	Snd1	100	98.791	Jaculus_jaculus
ENSMLEG00000029040	SND1	100	85.006	ENSKMAG00000016997	snd1	98	85.011	Kryptolebias_marmoratus
ENSMLEG00000029040	SND1	100	86.515	ENSLBEG00000013563	snd1	99	83.648	Labrus_bergylta
ENSMLEG00000029040	SND1	100	85.698	ENSLOCG00000015537	snd1	98	85.447	Lepisosteus_oculatus
ENSMLEG00000029040	SND1	100	98.531	ENSLAFG00000009696	SND1	100	98.352	Loxodonta_africana
ENSMLEG00000029040	SND1	100	99.890	ENSMFAG00000038114	SND1	100	99.890	Macaca_fascicularis
ENSMLEG00000029040	SND1	100	100.000	ENSMMUG00000015432	SND1	100	99.890	Macaca_mulatta
ENSMLEG00000029040	SND1	100	100.000	ENSMNEG00000039808	SND1	100	100.000	Macaca_nemestrina
ENSMLEG00000029040	SND1	97	88.007	ENSMAMG00000011739	snd1	98	84.487	Mastacembelus_armatus
ENSMLEG00000029040	SND1	100	84.329	ENSMZEG00005005681	snd1	99	84.076	Maylandia_zebra
ENSMLEG00000029040	SND1	100	99.231	ENSMICG00000000097	SND1	100	99.231	Microcebus_murinus
ENSMLEG00000029040	SND1	100	98.022	ENSMOCG00000005040	Snd1	100	98.022	Microtus_ochrogaster
ENSMLEG00000029040	SND1	100	84.442	ENSMMOG00000001795	snd1	99	84.205	Mola_mola
ENSMLEG00000029040	SND1	100	96.045	ENSMODG00000015182	SND1	99	95.875	Monodelphis_domestica
ENSMLEG00000029040	SND1	100	84.104	ENSMALG00000012071	snd1	98	84.040	Monopterus_albus
ENSMLEG00000029040	SND1	100	97.740	MGP_CAROLIEiJ_G0028159	Snd1	100	97.692	Mus_caroli
ENSMLEG00000029040	SND1	100	97.514	ENSMUSG00000001424	Snd1	100	97.473	Mus_musculus
ENSMLEG00000029040	SND1	100	97.740	MGP_PahariEiJ_G0021917	Snd1	100	98.482	Mus_pahari
ENSMLEG00000029040	SND1	100	97.740	MGP_SPRETEiJ_G0029159	Snd1	100	97.692	Mus_spretus
ENSMLEG00000029040	SND1	100	98.644	ENSMPUG00000006545	SND1	100	98.462	Mustela_putorius_furo
ENSMLEG00000029040	SND1	99	97.207	ENSMLUG00000017130	SND1	99	97.207	Myotis_lucifugus
ENSMLEG00000029040	SND1	100	98.022	ENSNGAG00000011186	Snd1	100	98.022	Nannospalax_galili
ENSMLEG00000029040	SND1	100	84.216	ENSNBRG00000006681	snd1	99	83.964	Neolamprologus_brichardi
ENSMLEG00000029040	SND1	100	99.661	ENSNLEG00000012263	SND1	100	99.661	Nomascus_leucogenys
ENSMLEG00000029040	SND1	93	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSMLEG00000029040	SND1	100	98.531	ENSODEG00000011502	SND1	100	98.352	Octodon_degus
ENSMLEG00000029040	SND1	100	84.216	ENSONIG00000011481	snd1	96	83.964	Oreochromis_niloticus
ENSMLEG00000029040	SND1	99	94.683	ENSOANG00000000817	SND1	99	93.757	Ornithorhynchus_anatinus
ENSMLEG00000029040	SND1	100	97.514	ENSOCUG00000001620	SND1	100	97.473	Oryctolagus_cuniculus
ENSMLEG00000029040	SND1	97	87.831	ENSORLG00000015201	snd1	98	83.911	Oryzias_latipes
ENSMLEG00000029040	SND1	97	87.831	ENSORLG00020013991	snd1	98	84.022	Oryzias_latipes_hni
ENSMLEG00000029040	SND1	97	87.831	ENSORLG00015012436	snd1	98	84.022	Oryzias_latipes_hsok
ENSMLEG00000029040	SND1	100	84.329	ENSOMEG00000006406	snd1	98	84.340	Oryzias_melastigma
ENSMLEG00000029040	SND1	100	99.123	ENSOGAG00000013356	SND1	94	99.123	Otolemur_garnettii
ENSMLEG00000029040	SND1	97	99.646	ENSOARG00000002149	SND1	100	96.271	Ovis_aries
ENSMLEG00000029040	SND1	100	99.560	ENSPPAG00000042947	SND1	100	99.560	Pan_paniscus
ENSMLEG00000029040	SND1	100	99.209	ENSPPRG00000004494	SND1	100	99.121	Panthera_pardus
ENSMLEG00000029040	SND1	100	99.096	ENSPTIG00000014214	SND1	100	99.011	Panthera_tigris_altaica
ENSMLEG00000029040	SND1	100	99.560	ENSPTRG00000023911	SND1	100	99.560	Pan_troglodytes
ENSMLEG00000029040	SND1	100	99.887	ENSPANG00000011997	SND1	100	99.887	Papio_anubis
ENSMLEG00000029040	SND1	97	85.366	ENSPKIG00000023494	snd1	98	81.798	Paramormyrops_kingsleyae
ENSMLEG00000029040	SND1	94	86.182	ENSPMGG00000003629	snd1	100	83.114	Periophthalmus_magnuspinnatus
ENSMLEG00000029040	SND1	100	97.912	ENSPEMG00000010240	Snd1	100	97.912	Peromyscus_maniculatus_bairdii
ENSMLEG00000029040	SND1	97	79.577	ENSPMAG00000007915	-	99	73.446	Petromyzon_marinus
ENSMLEG00000029040	SND1	100	96.497	ENSPCIG00000011561	SND1	100	96.374	Phascolarctos_cinereus
ENSMLEG00000029040	SND1	100	84.893	ENSPFOG00000001557	snd1	99	84.761	Poecilia_formosa
ENSMLEG00000029040	SND1	100	84.893	ENSPLAG00000018459	snd1	96	84.761	Poecilia_latipinna
ENSMLEG00000029040	SND1	100	85.344	ENSPMEG00000006803	snd1	99	85.206	Poecilia_mexicana
ENSMLEG00000029040	SND1	97	88.183	ENSPREG00000002189	snd1	99	84.872	Poecilia_reticulata
ENSMLEG00000029040	SND1	97	99.823	ENSPPYG00000017972	SND1	100	99.752	Pongo_abelii
ENSMLEG00000029040	SND1	100	86.703	ENSPCAG00000011305	SND1	99	86.622	Procavia_capensis
ENSMLEG00000029040	SND1	100	99.451	ENSPCOG00000026791	SND1	100	99.451	Propithecus_coquereli
ENSMLEG00000029040	SND1	100	97.033	ENSPVAG00000013945	SND1	100	97.033	Pteropus_vampyrus
ENSMLEG00000029040	SND1	100	84.329	ENSPNYG00000000932	snd1	99	84.076	Pundamilia_nyererei
ENSMLEG00000029040	SND1	97	87.873	ENSPNAG00000001206	snd1	98	84.333	Pygocentrus_nattereri
ENSMLEG00000029040	SND1	100	97.514	ENSRNOG00000031173	Snd1	99	97.357	Rattus_norvegicus
ENSMLEG00000029040	SND1	97	99.812	ENSRBIG00000027782	-	93	99.810	Rhinopithecus_bieti
ENSMLEG00000029040	SND1	100	99.890	ENSRROG00000033020	SND1	100	99.890	Rhinopithecus_roxellana
ENSMLEG00000029040	SND1	100	99.231	ENSSBOG00000032461	SND1	100	99.231	Saimiri_boliviensis_boliviensis
ENSMLEG00000029040	SND1	99	93.326	ENSSHAG00000015359	SND1	100	92.905	Sarcophilus_harrisii
ENSMLEG00000029040	SND1	97	86.411	ENSSFOG00015001103	snd1	98	83.352	Scleropages_formosus
ENSMLEG00000029040	SND1	100	83.878	ENSSMAG00000001932	snd1	93	83.630	Scophthalmus_maximus
ENSMLEG00000029040	SND1	100	84.667	ENSSDUG00000002699	snd1	92	84.427	Seriola_dumerili
ENSMLEG00000029040	SND1	100	77.227	ENSSLDG00000001950	snd1	98	77.086	Seriola_lalandi_dorsalis
ENSMLEG00000029040	SND1	97	91.858	ENSSARG00000004877	SND1	92	96.226	Sorex_araneus
ENSMLEG00000029040	SND1	99	85.787	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSMLEG00000029040	SND1	98	86.491	ENSSPAG00000021398	snd1	96	86.911	Stegastes_partitus
ENSMLEG00000029040	SND1	100	98.791	ENSSSCG00000016590	SND1	100	98.791	Sus_scrofa
ENSMLEG00000029040	SND1	100	85.156	ENSTRUG00000014067	snd1	98	83.781	Takifugu_rubripes
ENSMLEG00000029040	SND1	97	87.478	ENSTNIG00000011019	snd1	95	87.392	Tetraodon_nigroviridis
ENSMLEG00000029040	SND1	96	93.042	ENSTBEG00000003999	SND1	100	93.042	Tupaia_belangeri
ENSMLEG00000029040	SND1	100	94.396	ENSTTRG00000006059	SND1	100	94.396	Tursiops_truncatus
ENSMLEG00000029040	SND1	93	99.049	ENSUAMG00000005604	-	93	99.049	Ursus_americanus
ENSMLEG00000029040	SND1	89	89.972	ENSUAMG00000002820	-	86	90.323	Ursus_americanus
ENSMLEG00000029040	SND1	100	99.322	ENSUMAG00000005960	SND1	100	99.121	Ursus_maritimus
ENSMLEG00000029040	SND1	97	87.965	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSMLEG00000029040	SND1	100	99.209	ENSVVUG00000007226	SND1	100	99.121	Vulpes_vulpes
ENSMLEG00000029040	SND1	97	91.327	ENSXETG00000023043	snd1	100	84.554	Xenopus_tropicalis
ENSMLEG00000029040	SND1	94	87.636	ENSXCOG00000013629	snd1	99	81.473	Xiphophorus_couchianus
ENSMLEG00000029040	SND1	100	85.231	ENSXMAG00000011469	snd1	99	85.095	Xiphophorus_maculatus