EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000029642 (Gene tree)
Gene ID: 105538860
Gene Symbol: APOBEC3F
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3F
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 16625 bases
Position: chrKN974095.1:3948677-3965301
Accession: 105538860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000010909	APOBEC_N	PF08210.11	4.9e-104	1	2
ENSMLEP00000010909	APOBEC_N	PF08210.11	4.9e-104	2	2
ENSMLEP00000010909	APOBEC_C	PF05240.14	1.3e-65	1	2
ENSMLEP00000010909	APOBEC_C	PF05240.14	1.3e-65	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000034328	APOBEC3F-201	1782	XM_011978842	ENSMLEP00000010909	373 (aa)	XP_011834232	A0A2K5Y5T5
ENSMLET00000034334	APOBEC3F-202	740	XM_011978843	ENSMLEP00000010915	102 (aa)	XP_011834233	A0A2K5Y5U1

Gene Model

Click here to download ENSMLEG00000029642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000029642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000029642	APOBEC3F	98	33.000	ENSMLEG00000028328	APOBEC2	88	33.166
ENSMLEG00000029642	APOBEC3F	100	74.731	ENSMLEG00000036992	APOBEC3C	100	74.731
ENSMLEG00000029642	APOBEC3F	69	46.154	ENSMLEG00000039759	-	80	44.776
ENSMLEG00000029642	APOBEC3F	99	44.444	ENSMLEG00000024444	APOBEC3G	96	43.669
ENSMLEG00000029642	APOBEC3F	94	43.103	ENSMLEG00000040938	AICDA	94	42.647
ENSMLEG00000029642	APOBEC3F	94	35.870	ENSMLEG00000033417	APOBEC3H	92	34.899
ENSMLEG00000029642	APOBEC3F	100	58.377	ENSMLEG00000004809	-	99	58.377

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000029642	APOBEC3F	100	75.269	ENSG00000244509	APOBEC3C	100	75.269	Homo_sapiens
ENSMLEG00000029642	APOBEC3F	100	77.957	ENSG00000243811	APOBEC3D	100	77.957	Homo_sapiens
ENSMLEG00000029642	APOBEC3F	100	87.668	ENSG00000128394	APOBEC3F	100	87.668	Homo_sapiens
ENSMLEG00000029642	APOBEC3F	100	68.421	ENSANAG00000030088	-	99	68.365	Aotus_nancymaae
ENSMLEG00000029642	APOBEC3F	70	68.182	ENSCJAG00000015317	-	100	68.182	Callithrix_jacchus
ENSMLEG00000029642	APOBEC3F	94	45.989	ENSCAFG00020002615	-	99	45.989	Canis_lupus_dingo
ENSMLEG00000029642	APOBEC3F	99	53.005	ENSTSYG00000034260	-	98	53.005	Carlito_syrichta
ENSMLEG00000029642	APOBEC3F	97	50.549	ENSTSYG00000030036	-	99	50.549	Carlito_syrichta
ENSMLEG00000029642	APOBEC3F	97	55.738	ENSTSYG00000028254	-	99	55.738	Carlito_syrichta
ENSMLEG00000029642	APOBEC3F	99	66.837	ENSCCAG00000030932	-	89	66.837	Cebus_capucinus
ENSMLEG00000029642	APOBEC3F	98	96.739	ENSCATG00000033502	-	95	96.739	Cercocebus_atys
ENSMLEG00000029642	APOBEC3F	100	73.656	ENSCATG00000043226	APOBEC3C	100	73.656	Cercocebus_atys
ENSMLEG00000029642	APOBEC3F	100	85.027	ENSCSAG00000006382	APOBEC3F	100	85.027	Chlorocebus_sabaeus
ENSMLEG00000029642	APOBEC3F	100	73.118	ENSCSAG00000006402	APOBEC3C	100	73.118	Chlorocebus_sabaeus
ENSMLEG00000029642	APOBEC3F	100	93.566	ENSCANG00000032904	-	100	93.566	Colobus_angolensis_palliatus
ENSMLEG00000029642	APOBEC3F	100	89.812	ENSCANG00000033269	-	99	91.304	Colobus_angolensis_palliatus
ENSMLEG00000029642	APOBEC3F	100	73.656	ENSCANG00000039177	APOBEC3C	100	73.656	Colobus_angolensis_palliatus
ENSMLEG00000029642	APOBEC3F	100	83.198	ENSCANG00000031957	-	100	82.888	Colobus_angolensis_palliatus
ENSMLEG00000029642	APOBEC3F	95	34.426	ENSDNOG00000044642	-	99	34.426	Dasypus_novemcinctus
ENSMLEG00000029642	APOBEC3F	99	47.959	ENSEASG00005018641	-	96	47.959	Equus_asinus_asinus
ENSMLEG00000029642	APOBEC3F	99	49.730	ENSECAG00000006071	-	100	44.809	Equus_caballus
ENSMLEG00000029642	APOBEC3F	100	74.194	ENSGGOG00000036587	-	100	74.194	Gorilla_gorilla
ENSMLEG00000029642	APOBEC3F	100	88.740	ENSGGOG00000038678	APOBEC3F	100	88.740	Gorilla_gorilla
ENSMLEG00000029642	APOBEC3F	99	42.473	ENSHGLG00000017315	-	91	42.473	Heterocephalus_glaber_female
ENSMLEG00000029642	APOBEC3F	99	42.473	ENSHGLG00100003105	-	94	42.473	Heterocephalus_glaber_male
ENSMLEG00000029642	APOBEC3F	100	94.370	ENSMFAG00000004037	APOBEC3F	100	94.370	Macaca_fascicularis
ENSMLEG00000029642	APOBEC3F	100	76.344	ENSMFAG00000016792	APOBEC3C	100	76.344	Macaca_fascicularis
ENSMLEG00000029642	APOBEC3F	100	77.807	ENSMFAG00000002331	-	100	77.807	Macaca_fascicularis
ENSMLEG00000029642	APOBEC3F	98	76.087	ENSMMUG00000004018	APOBEC3C	95	76.087	Macaca_mulatta
ENSMLEG00000029642	APOBEC3F	99	95.135	ENSMMUG00000004017	APOBEC3F	99	93.514	Macaca_mulatta
ENSMLEG00000029642	APOBEC3F	100	83.378	ENSMNEG00000043316	APOBEC3D	100	83.378	Macaca_nemestrina
ENSMLEG00000029642	APOBEC3F	100	73.656	ENSMNEG00000045196	APOBEC3C	100	73.656	Macaca_nemestrina
ENSMLEG00000029642	APOBEC3F	99	53.514	ENSMICG00000042615	-	89	53.514	Microcebus_murinus
ENSMLEG00000029642	APOBEC3F	99	45.541	ENSMLUG00000023676	-	99	45.541	Myotis_lucifugus
ENSMLEG00000029642	APOBEC3F	100	71.505	ENSNLEG00000028392	APOBEC3C	100	71.505	Nomascus_leucogenys
ENSMLEG00000029642	APOBEC3F	100	69.430	ENSNLEG00000035811	-	100	69.430	Nomascus_leucogenys
ENSMLEG00000029642	APOBEC3F	99	43.342	ENSOGAG00000032498	-	99	43.342	Otolemur_garnettii
ENSMLEG00000029642	APOBEC3F	99	42.440	ENSOGAG00000030300	-	99	42.440	Otolemur_garnettii
ENSMLEG00000029642	APOBEC3F	98	43.956	ENSOGAG00000033404	-	100	43.956	Otolemur_garnettii
ENSMLEG00000029642	APOBEC3F	100	74.194	ENSPPAG00000014118	APOBEC3C	100	74.194	Pan_paniscus
ENSMLEG00000029642	APOBEC3F	100	76.582	ENSPPAG00000028218	-	100	75.269	Pan_paniscus
ENSMLEG00000029642	APOBEC3F	98	49.457	ENSPPRG00000003726	-	98	49.457	Panthera_pardus
ENSMLEG00000029642	APOBEC3F	100	74.731	ENSPTRG00000041588	APOBEC3D	100	74.731	Pan_troglodytes
ENSMLEG00000029642	APOBEC3F	100	89.008	ENSPTRG00000014385	APOBEC3C	100	89.008	Pan_troglodytes
ENSMLEG00000029642	APOBEC3F	100	94.370	ENSPANG00000010775	APOBEC3F	100	94.370	Papio_anubis
ENSMLEG00000029642	APOBEC3F	100	70.968	ENSPPYG00000011832	APOBEC3C	100	70.968	Pongo_abelii
ENSMLEG00000029642	APOBEC3F	69	60.000	ENSPCOG00000018072	-	100	60.000	Propithecus_coquereli
ENSMLEG00000029642	APOBEC3F	68	57.364	ENSPCOG00000022067	-	98	57.364	Propithecus_coquereli
ENSMLEG00000029642	APOBEC3F	81	50.407	ENSPVAG00000009461	-	71	50.407	Pteropus_vampyrus
ENSMLEG00000029642	APOBEC3F	100	74.346	ENSRBIG00000030834	-	100	74.346	Rhinopithecus_bieti
ENSMLEG00000029642	APOBEC3F	100	87.936	ENSRBIG00000042297	-	100	94.268	Rhinopithecus_bieti
ENSMLEG00000029642	APOBEC3F	100	94.199	ENSRBIG00000030323	-	100	94.199	Rhinopithecus_bieti
ENSMLEG00000029642	APOBEC3F	100	93.566	ENSRROG00000029045	APOBEC3C	100	93.566	Rhinopithecus_roxellana
ENSMLEG00000029642	APOBEC3F	100	77.005	ENSRROG00000028557	-	100	77.005	Rhinopithecus_roxellana
ENSMLEG00000029642	APOBEC3F	100	87.668	ENSRROG00000029996	-	100	87.668	Rhinopithecus_roxellana
ENSMLEG00000029642	APOBEC3F	100	70.588	ENSSBOG00000032780	-	100	70.588	Saimiri_boliviensis_boliviensis
ENSMLEG00000029642	APOBEC3F	95	46.409	ENSUAMG00000004433	-	100	46.409	Ursus_americanus
ENSMLEG00000029642	APOBEC3F	98	47.283	ENSUMAG00000014441	-	86	47.283	Ursus_maritimus
ENSMLEG00000029642	APOBEC3F	77	48.993	ENSVVUG00000014628	-	91	48.630	Vulpes_vulpes