EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000031743 (Gene tree)
Gene ID: 105542224
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 203494 bases
Position: chrKN974684.1:387696-591189
Accession: 105542224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000015140	R3H	PF01424.22	5e-05	1	1
ENSMLEP00000015131	R3H	PF01424.22	5.4e-05	1	1
ENSMLEP00000015153	R3H	PF01424.22	5.9e-05	1	1
ENSMLEP00000015148	RNA_bind	PF08675.11	8.4e-34	1	1
ENSMLEP00000015140	RNA_bind	PF08675.11	1.1e-33	1	1
ENSMLEP00000015131	RNA_bind	PF08675.11	1.2e-33	1	1
ENSMLEP00000015153	RNA_bind	PF08675.11	1.2e-33	1	1
ENSMLEP00000015153	CAF1	PF04857.20	2.5e-89	1	1
ENSMLEP00000015140	CAF1	PF04857.20	3.2e-70	1	1
ENSMLEP00000015131	CAF1	PF04857.20	3.1e-68	1	2
ENSMLEP00000015131	CAF1	PF04857.20	3.1e-68	2	2
ENSMLEP00000015148	CAF1	PF04857.20	1.6e-52	1	2
ENSMLEP00000015148	CAF1	PF04857.20	1.6e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000038586	PARN-201	2911	XM_011983662	ENSMLEP00000015131	593 (aa)	XP_011839052	A0A2K5YHU2
ENSMLET00000038603	PARN-203	2506	XM_011983664	ENSMLEP00000015148	464 (aa)	XP_011839054	A0A2K5YHW8
ENSMLET00000038595	PARN-202	2958	XM_011983663	ENSMLEP00000015140	578 (aa)	XP_011839053	A0A2K5YHY3
ENSMLET00000038608	PARN-204	1920	-	ENSMLEP00000015153	639 (aa)	-	A0A2K5YHX4

Gene Model

Click here to download ENSMLEG00000031743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000031743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000031743	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSMLEG00000031743	PARN	100	96.610	ENSAMEG00000011208	PARN	100	92.656	Ailuropoda_melanoleuca
ENSMLEG00000031743	PARN	83	76.493	ENSACIG00000000619	parn	83	76.493	Amphilophus_citrinellus
ENSMLEG00000031743	PARN	95	71.569	ENSAOCG00000003465	parn	83	73.504	Amphiprion_ocellaris
ENSMLEG00000031743	PARN	82	77.778	ENSAPEG00000010661	parn	91	77.778	Amphiprion_percula
ENSMLEG00000031743	PARN	92	76.271	ENSATEG00000004661	parn	88	71.498	Anabas_testudineus
ENSMLEG00000031743	PARN	99	87.037	ENSAPLG00000013914	PARN	99	84.858	Anas_platyrhynchos
ENSMLEG00000031743	PARN	100	89.831	ENSACAG00000004973	PARN	100	78.923	Anolis_carolinensis
ENSMLEG00000031743	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSMLEG00000031743	PARN	89	77.966	ENSACLG00000004742	parn	85	74.030	Astatotilapia_calliptera
ENSMLEG00000031743	PARN	86	79.661	ENSAMXG00000012390	parn	92	72.522	Astyanax_mexicanus
ENSMLEG00000031743	PARN	100	98.305	ENSBTAG00000018097	PARN	100	93.426	Bos_taurus
ENSMLEG00000031743	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSMLEG00000031743	PARN	100	94.915	ENSCAFG00000018795	PARN	100	92.801	Canis_familiaris
ENSMLEG00000031743	PARN	100	96.610	ENSCAFG00020024126	PARN	100	92.801	Canis_lupus_dingo
ENSMLEG00000031743	PARN	100	98.305	ENSCHIG00000018143	PARN	100	93.897	Capra_hircus
ENSMLEG00000031743	PARN	60	77.500	ENSCAPG00000007984	PARN	78	63.825	Cavia_aperea
ENSMLEG00000031743	PARN	100	98.305	ENSCPOG00000002263	PARN	100	90.923	Cavia_porcellus
ENSMLEG00000031743	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSMLEG00000031743	PARN	52	35.862	ENSCATG00000033196	PNLDC1	70	35.862	Cercocebus_atys
ENSMLEG00000031743	PARN	90	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSMLEG00000031743	PARN	100	96.610	ENSCLAG00000015406	PARN	99	90.610	Chinchilla_lanigera
ENSMLEG00000031743	PARN	100	100.000	ENSCSAG00000008142	PARN	100	99.687	Chlorocebus_sabaeus
ENSMLEG00000031743	PARN	98	98.077	ENSCHOG00000007014	PARN	100	76.899	Choloepus_hoffmanni
ENSMLEG00000031743	PARN	97	85.383	ENSCPBG00000006609	PARN	97	85.661	Chrysemys_picta_bellii
ENSMLEG00000031743	PARN	80	44.278	ENSCING00000010142	-	99	43.985	Ciona_intestinalis
ENSMLEG00000031743	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSMLEG00000031743	PARN	100	96.610	ENSCGRG00001012096	Parn	100	85.981	Cricetulus_griseus_chok1gshd
ENSMLEG00000031743	PARN	100	96.610	ENSCGRG00000004939	Parn	100	85.981	Cricetulus_griseus_crigri
ENSMLEG00000031743	PARN	94	79.661	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSMLEG00000031743	PARN	87	77.966	ENSCVAG00000014848	parn	83	73.459	Cyprinodon_variegatus
ENSMLEG00000031743	PARN	100	71.186	ENSDARG00000102634	parn	100	58.333	Danio_rerio
ENSMLEG00000031743	PARN	100	98.305	ENSDNOG00000000833	PARN	100	93.427	Dasypus_novemcinctus
ENSMLEG00000031743	PARN	74	94.297	ENSETEG00000014828	-	78	94.297	Echinops_telfairi
ENSMLEG00000031743	PARN	76	52.381	ENSEBUG00000007052	PARN	70	70.982	Eptatretus_burgeri
ENSMLEG00000031743	PARN	100	98.305	ENSEASG00005011400	PARN	100	93.114	Equus_asinus_asinus
ENSMLEG00000031743	PARN	100	96.610	ENSECAG00000017792	PARN	100	92.958	Equus_caballus
ENSMLEG00000031743	PARN	86	84.615	ENSEEUG00000010370	PARN	86	84.615	Erinaceus_europaeus
ENSMLEG00000031743	PARN	88	79.661	ENSELUG00000013139	parn	77	72.297	Esox_lucius
ENSMLEG00000031743	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSMLEG00000031743	PARN	98	88.462	ENSFALG00000003911	PARN	98	83.703	Ficedula_albicollis
ENSMLEG00000031743	PARN	100	98.305	ENSFDAG00000009234	PARN	100	90.297	Fukomys_damarensis
ENSMLEG00000031743	PARN	87	79.245	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSMLEG00000031743	PARN	83	76.679	ENSGMOG00000003231	parn	97	76.679	Gadus_morhua
ENSMLEG00000031743	PARN	100	91.525	ENSGALG00000003091	PARN	100	82.582	Gallus_gallus
ENSMLEG00000031743	PARN	86	79.661	ENSGAFG00000011061	parn	84	72.987	Gambusia_affinis
ENSMLEG00000031743	PARN	83	77.425	ENSGACG00000019501	parn	100	68.721	Gasterosteus_aculeatus
ENSMLEG00000031743	PARN	70	79.448	ENSGAGG00000023281	PARN	83	79.448	Gopherus_agassizii
ENSMLEG00000031743	PARN	96	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSMLEG00000031743	PARN	89	77.966	ENSHBUG00000017906	parn	90	77.467	Haplochromis_burtoni
ENSMLEG00000031743	PARN	100	98.305	ENSHGLG00000010886	PARN	100	90.610	Heterocephalus_glaber_female
ENSMLEG00000031743	PARN	100	98.305	ENSHGLG00100014659	PARN	100	90.610	Heterocephalus_glaber_male
ENSMLEG00000031743	PARN	82	74.102	ENSHCOG00000008683	parn	91	74.102	Hippocampus_comes
ENSMLEG00000031743	PARN	86	69.492	ENSIPUG00000012401	parn	84	62.995	Ictalurus_punctatus
ENSMLEG00000031743	PARN	100	96.610	ENSSTOG00000007519	PARN	100	91.549	Ictidomys_tridecemlineatus
ENSMLEG00000031743	PARN	100	98.305	ENSJJAG00000023049	Parn	100	88.106	Jaculus_jaculus
ENSMLEG00000031743	PARN	94	76.271	ENSKMAG00000009462	parn	84	73.720	Kryptolebias_marmoratus
ENSMLEG00000031743	PARN	88	77.966	ENSLBEG00000009167	parn	90	72.666	Labrus_bergylta
ENSMLEG00000031743	PARN	77	81.432	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSMLEG00000031743	PARN	96	81.356	ENSLOCG00000000715	parn	87	73.762	Lepisosteus_oculatus
ENSMLEG00000031743	PARN	100	98.305	ENSLAFG00000015036	PARN	100	93.114	Loxodonta_africana
ENSMLEG00000031743	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSMLEG00000031743	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSMLEG00000031743	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSMLEG00000031743	PARN	89	77.966	ENSMAMG00000006939	parn	84	72.529	Mastacembelus_armatus
ENSMLEG00000031743	PARN	89	77.966	ENSMZEG00005013590	parn	90	77.239	Maylandia_zebra
ENSMLEG00000031743	PARN	94	100.000	ENSMGAG00000001004	PARN	95	82.708	Meleagris_gallopavo
ENSMLEG00000031743	PARN	95	94.286	ENSMAUG00000008025	Parn	100	80.710	Mesocricetus_auratus
ENSMLEG00000031743	PARN	100	98.305	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSMLEG00000031743	PARN	77	91.498	ENSMOCG00000022211	Parn	100	91.498	Microtus_ochrogaster
ENSMLEG00000031743	PARN	83	76.636	ENSMMOG00000011333	parn	87	76.636	Mola_mola
ENSMLEG00000031743	PARN	77	94.153	ENSMODG00000004915	PARN	99	94.153	Monodelphis_domestica
ENSMLEG00000031743	PARN	80	86.207	ENSMALG00000019426	parn	91	79.143	Monopterus_albus
ENSMLEG00000031743	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	86.698	Mus_caroli
ENSMLEG00000031743	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSMLEG00000031743	PARN	51	30.120	ENSMUSG00000073460	Pnldc1	66	36.496	Mus_musculus
ENSMLEG00000031743	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	86.385	Mus_pahari
ENSMLEG00000031743	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	86.698	Mus_spretus
ENSMLEG00000031743	PARN	100	98.305	ENSMPUG00000014464	PARN	100	93.114	Mustela_putorius_furo
ENSMLEG00000031743	PARN	77	94.332	ENSMLUG00000005414	PARN	100	94.332	Myotis_lucifugus
ENSMLEG00000031743	PARN	77	83.056	ENSNBRG00000006805	parn	90	76.966	Neolamprologus_brichardi
ENSMLEG00000031743	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSMLEG00000031743	PARN	93	92.308	ENSMEUG00000008178	-	100	60.918	Notamacropus_eugenii
ENSMLEG00000031743	PARN	98	98.077	ENSOPRG00000012187	PARN	100	86.392	Ochotona_princeps
ENSMLEG00000031743	PARN	100	98.305	ENSODEG00000001617	PARN	100	81.776	Octodon_degus
ENSMLEG00000031743	PARN	100	77.966	ENSONIG00000000151	parn	100	69.692	Oreochromis_niloticus
ENSMLEG00000031743	PARN	82	81.890	ENSOANG00000020155	-	97	82.415	Ornithorhynchus_anatinus
ENSMLEG00000031743	PARN	100	91.522	ENSOCUG00000000322	PARN	100	91.509	Oryctolagus_cuniculus
ENSMLEG00000031743	PARN	93	79.661	ENSORLG00020010313	parn	88	70.984	Oryzias_latipes_hni
ENSMLEG00000031743	PARN	93	79.661	ENSORLG00015000300	parn	88	70.820	Oryzias_latipes_hsok
ENSMLEG00000031743	PARN	88	79.661	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSMLEG00000031743	PARN	77	94.949	ENSOGAG00000014626	PARN	100	94.949	Otolemur_garnettii
ENSMLEG00000031743	PARN	77	97.773	ENSOARG00000007574	PARN	100	97.773	Ovis_aries
ENSMLEG00000031743	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSMLEG00000031743	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSMLEG00000031743	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSMLEG00000031743	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSMLEG00000031743	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSMLEG00000031743	PARN	96	79.661	ENSPKIG00000022807	parn	91	70.578	Paramormyrops_kingsleyae
ENSMLEG00000031743	PARN	98	89.831	ENSPSIG00000014804	PARN	100	83.218	Pelodiscus_sinensis
ENSMLEG00000031743	PARN	80	76.848	ENSPMGG00000014431	parn	75	74.861	Periophthalmus_magnuspinnatus
ENSMLEG00000031743	PARN	100	94.915	ENSPEMG00000018439	Parn	100	83.725	Peromyscus_maniculatus_bairdii
ENSMLEG00000031743	PARN	81	67.500	ENSPMAG00000003956	parn	99	67.500	Petromyzon_marinus
ENSMLEG00000031743	PARN	66	86.761	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSMLEG00000031743	PARN	83	77.612	ENSPFOG00000012823	parn	84	72.559	Poecilia_formosa
ENSMLEG00000031743	PARN	83	77.799	ENSPLAG00000006395	parn	84	72.727	Poecilia_latipinna
ENSMLEG00000031743	PARN	83	77.799	ENSPMEG00000007711	parn	84	72.896	Poecilia_mexicana
ENSMLEG00000031743	PARN	83	77.425	ENSPREG00000000147	parn	84	72.559	Poecilia_reticulata
ENSMLEG00000031743	PARN	100	98.962	ENSPPYG00000007123	PARN	100	98.596	Pongo_abelii
ENSMLEG00000031743	PARN	93	96.154	ENSPCAG00000001741	PARN	100	83.003	Procavia_capensis
ENSMLEG00000031743	PARN	100	98.305	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSMLEG00000031743	PARN	98	98.077	ENSPVAG00000002547	PARN	100	89.715	Pteropus_vampyrus
ENSMLEG00000031743	PARN	89	77.966	ENSPNYG00000006835	parn	90	74.488	Pundamilia_nyererei
ENSMLEG00000031743	PARN	90	73.180	ENSPNAG00000018905	parn	86	73.371	Pygocentrus_nattereri
ENSMLEG00000031743	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSMLEG00000031743	PARN	72	99.700	ENSRBIG00000018726	PARN	100	99.700	Rhinopithecus_bieti
ENSMLEG00000031743	PARN	72	99.700	ENSRROG00000011162	-	100	99.700	Rhinopithecus_roxellana
ENSMLEG00000031743	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSMLEG00000031743	PARN	65	93.062	ENSSHAG00000008493	PARN	94	93.062	Sarcophilus_harrisii
ENSMLEG00000031743	PARN	94	79.661	ENSSFOG00015014165	parn	94	73.379	Scleropages_formosus
ENSMLEG00000031743	PARN	95	69.677	ENSSMAG00000000685	parn	87	71.771	Scophthalmus_maximus
ENSMLEG00000031743	PARN	94	76.271	ENSSDUG00000014555	parn	83	73.549	Seriola_dumerili
ENSMLEG00000031743	PARN	100	80.623	ENSSARG00000014339	PARN	100	80.690	Sorex_araneus
ENSMLEG00000031743	PARN	100	89.831	ENSSPUG00000007719	PARN	100	85.290	Sphenodon_punctatus
ENSMLEG00000031743	PARN	88	77.966	ENSSPAG00000007095	parn	86	74.906	Stegastes_partitus
ENSMLEG00000031743	PARN	100	98.305	ENSSSCG00000007878	PARN	89	92.488	Sus_scrofa
ENSMLEG00000031743	PARN	99	87.037	ENSTGUG00000004971	PARN	99	83.438	Taeniopygia_guttata
ENSMLEG00000031743	PARN	100	79.661	ENSTNIG00000008252	parn	100	69.243	Tetraodon_nigroviridis
ENSMLEG00000031743	PARN	100	79.758	ENSTBEG00000010407	PARN	100	79.655	Tupaia_belangeri
ENSMLEG00000031743	PARN	98	98.077	ENSTTRG00000002843	PARN	100	88.924	Tursiops_truncatus
ENSMLEG00000031743	PARN	75	83.716	ENSUAMG00000008283	PARN	90	83.716	Ursus_americanus
ENSMLEG00000031743	PARN	100	98.305	ENSUMAG00000004527	PARN	100	93.114	Ursus_maritimus
ENSMLEG00000031743	PARN	95	98.077	ENSVPAG00000008968	PARN	100	90.065	Vicugna_pacos
ENSMLEG00000031743	PARN	100	96.610	ENSVVUG00000019509	PARN	100	93.271	Vulpes_vulpes
ENSMLEG00000031743	PARN	100	81.967	ENSXETG00000010994	parn	100	82.890	Xenopus_tropicalis
ENSMLEG00000031743	PARN	86	79.661	ENSXCOG00000015990	parn	96	69.205	Xiphophorus_couchianus
ENSMLEG00000031743	PARN	88	79.661	ENSXMAG00000014783	parn	84	73.232	Xiphophorus_maculatus