EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000032492 (Gene tree)
Gene ID: 105533832
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 38996 bases
Position: chrKN973307.1:1326601-1365596
Accession: 105533832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000016755	RRM_1	PF00076.22	1.9e-30	1	3
ENSMLEP00000016755	RRM_1	PF00076.22	1.9e-30	2	3
ENSMLEP00000016755	RRM_1	PF00076.22	1.9e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000040233	RBM12-204	2195	XM_011972384	ENSMLEP00000016762	542 (aa)	XP_011827774	A0A2K5YMG2
ENSMLET00000040207	RBM12-202	2010	XM_011972387	ENSMLEP00000016736	569 (aa)	XP_011827777	A0A2K5YMF9
ENSMLET00000040226	RBM12-203	2865	-	ENSMLEP00000016755	954 (aa)	-	A0A2K5YMI4
ENSMLET00000040237	RBM12-205	1659	-	ENSMLEP00000016766	552 (aa)	-	A0A2K5YMJ0
ENSMLET00000040197	RBM12-201	1782	-	ENSMLEP00000016726	593 (aa)	-	A0A2K5YME9

Gene Model

Click here to download ENSMLEG00000032492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000032492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000032492	RBM12	54	72.414	ENSMLEG00000037288	RBM12B	57	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000032492	RBM12	98	99.571	ENSG00000244462	RBM12	100	99.571	Homo_sapiens
ENSMLEG00000032492	RBM12	98	96.030	ENSAMEG00000019189	RBM12	100	96.030	Ailuropoda_melanoleuca
ENSMLEG00000032492	RBM12	99	78.504	ENSACAG00000006330	RBM12	99	78.504	Anolis_carolinensis
ENSMLEG00000032492	RBM12	100	98.532	ENSANAG00000032596	RBM12	100	98.532	Aotus_nancymaae
ENSMLEG00000032492	RBM12	98	92.059	ENSBTAG00000044015	RBM12	100	91.432	Bos_taurus
ENSMLEG00000032492	RBM12	100	95.283	ENSCAFG00000008256	RBM12	100	94.549	Canis_familiaris
ENSMLEG00000032492	RBM12	98	94.635	ENSCAFG00020005650	RBM12	100	94.421	Canis_lupus_dingo
ENSMLEG00000032492	RBM12	98	94.313	ENSCHIG00000024592	RBM12	100	93.562	Capra_hircus
ENSMLEG00000032492	RBM12	100	94.654	ENSTSYG00000030563	RBM12	100	94.759	Carlito_syrichta
ENSMLEG00000032492	RBM12	82	86.792	ENSCAPG00000006176	RBM12	80	93.581	Cavia_aperea
ENSMLEG00000032492	RBM12	98	87.688	ENSCPOG00000035170	RBM12	100	93.626	Cavia_porcellus
ENSMLEG00000032492	RBM12	94	94.843	ENSCCAG00000036056	-	98	94.843	Cebus_capucinus
ENSMLEG00000032492	RBM12	91	89.418	ENSCCAG00000035899	-	100	76.395	Cebus_capucinus
ENSMLEG00000032492	RBM12	100	99.895	ENSCATG00000030934	RBM12	100	99.895	Cercocebus_atys
ENSMLEG00000032492	RBM12	98	93.455	ENSCLAG00000017230	RBM12	100	93.455	Chinchilla_lanigera
ENSMLEG00000032492	RBM12	100	99.581	ENSCANG00000030552	RBM12	100	99.581	Colobus_angolensis_palliatus
ENSMLEG00000032492	RBM12	98	81.000	ENSCGRG00001021144	Rbm12	100	86.131	Cricetulus_griseus_chok1gshd
ENSMLEG00000032492	RBM12	98	81.000	ENSCGRG00000012719	Rbm12	100	86.131	Cricetulus_griseus_crigri
ENSMLEG00000032492	RBM12	73	86.733	ENSDORG00000000606	-	100	81.672	Dipodomys_ordii
ENSMLEG00000032492	RBM12	98	94.017	ENSDORG00000028509	-	100	93.376	Dipodomys_ordii
ENSMLEG00000032492	RBM12	52	85.870	ENSEBUG00000016806	rbm12	89	65.649	Eptatretus_burgeri
ENSMLEG00000032492	RBM12	98	94.957	ENSECAG00000021997	RBM12	100	94.099	Equus_caballus
ENSMLEG00000032492	RBM12	98	94.099	ENSFDAG00000014663	RBM12	100	93.670	Fukomys_damarensis
ENSMLEG00000032492	RBM12	98	79.207	ENSGALG00000030253	RBM12	100	79.636	Gallus_gallus
ENSMLEG00000032492	RBM12	100	99.581	ENSGGOG00000028500	RBM12	100	99.581	Gorilla_gorilla
ENSMLEG00000032492	RBM12	98	94.421	ENSHGLG00000013208	RBM12	100	93.991	Heterocephalus_glaber_female
ENSMLEG00000032492	RBM12	88	97.492	ENSHGLG00100019158	RBM12	90	97.492	Heterocephalus_glaber_male
ENSMLEG00000032492	RBM12	98	90.336	ENSSTOG00000019739	RBM12	100	90.126	Ictidomys_tridecemlineatus
ENSMLEG00000032492	RBM12	98	93.991	ENSLAFG00000010341	RBM12	100	93.562	Loxodonta_africana
ENSMLEG00000032492	RBM12	100	99.895	ENSMFAG00000032583	RBM12	100	99.895	Macaca_fascicularis
ENSMLEG00000032492	RBM12	98	100.000	ENSMMUG00000020960	CPNE1	100	100.000	Macaca_mulatta
ENSMLEG00000032492	RBM12	100	100.000	ENSMNEG00000045365	RBM12	100	100.000	Macaca_nemestrina
ENSMLEG00000032492	RBM12	99	78.105	ENSMGAG00000001502	RBM12	100	79.479	Meleagris_gallopavo
ENSMLEG00000032492	RBM12	98	86.734	ENSMAUG00000012800	Rbm12	100	87.337	Mesocricetus_auratus
ENSMLEG00000032492	RBM12	100	93.396	ENSMICG00000032761	-	100	93.920	Microcebus_murinus
ENSMLEG00000032492	RBM12	98	85.408	ENSMICG00000029540	-	72	84.604	Microcebus_murinus
ENSMLEG00000032492	RBM12	98	80.120	ENSMOCG00000012950	Rbm12	100	92.493	Microtus_ochrogaster
ENSMLEG00000032492	RBM12	100	85.010	ENSMODG00000001591	RBM12	100	84.801	Monodelphis_domestica
ENSMLEG00000032492	RBM12	98	77.581	MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	Mus_caroli
ENSMLEG00000032492	RBM12	98	85.155	ENSMUSG00000089824	Rbm12	100	92.582	Mus_musculus
ENSMLEG00000032492	RBM12	98	78.175	MGP_PahariEiJ_G0025996	Rbm12	100	93.010	Mus_pahari
ENSMLEG00000032492	RBM12	71	94.118	MGP_SPRETEiJ_G0025473	Rbm12	99	92.725	Mus_spretus
ENSMLEG00000032492	RBM12	98	94.742	ENSMPUG00000017789	-	100	93.991	Mustela_putorius_furo
ENSMLEG00000032492	RBM12	100	94.235	ENSMLUG00000011217	RBM12	100	93.501	Myotis_lucifugus
ENSMLEG00000032492	RBM12	98	80.704	ENSNGAG00000015846	Rbm12	100	86.660	Nannospalax_galili
ENSMLEG00000032492	RBM12	100	99.266	ENSNLEG00000010268	RBM12	100	99.266	Nomascus_leucogenys
ENSMLEG00000032492	RBM12	98	84.657	ENSMEUG00000007621	RBM12	100	84.442	Notamacropus_eugenii
ENSMLEG00000032492	RBM12	98	92.144	ENSOPRG00000005687	RBM12	100	91.720	Ochotona_princeps
ENSMLEG00000032492	RBM12	84	89.398	ENSODEG00000013870	RBM12	100	86.646	Octodon_degus
ENSMLEG00000032492	RBM12	100	99.581	ENSPPAG00000040719	RBM12	100	99.581	Pan_paniscus
ENSMLEG00000032492	RBM12	100	99.581	ENSPTRG00000013446	RBM12	100	99.581	Pan_troglodytes
ENSMLEG00000032492	RBM12	100	99.581	ENSPTRG00000040708	-	100	99.581	Pan_troglodytes
ENSMLEG00000032492	RBM12	100	100.000	ENSPANG00000020003	CPNE1	100	100.000	Papio_anubis
ENSMLEG00000032492	RBM12	88	85.970	ENSPSIG00000007369	RBM12	92	93.103	Pelodiscus_sinensis
ENSMLEG00000032492	RBM12	98	79.860	ENSPEMG00000017769	Rbm12	100	81.647	Peromyscus_maniculatus_bairdii
ENSMLEG00000032492	RBM12	58	78.571	ENSPFOG00000023551	rbm12	93	78.873	Poecilia_formosa
ENSMLEG00000032492	RBM12	98	99.465	ENSPPYG00000010960	RBM12	100	99.465	Pongo_abelii
ENSMLEG00000032492	RBM12	98	92.382	ENSPCAG00000008653	RBM12	100	91.631	Procavia_capensis
ENSMLEG00000032492	RBM12	100	96.226	ENSPCOG00000023724	RBM12	100	96.226	Propithecus_coquereli
ENSMLEG00000032492	RBM12	81	94.156	ENSPVAG00000014937	RBM12	100	93.670	Pteropus_vampyrus
ENSMLEG00000032492	RBM12	73	92.439	ENSRNOG00000049913	LOC100910990	97	92.439	Rattus_norvegicus
ENSMLEG00000032492	RBM12	73	92.439	ENSRNOG00000019723	Rbm12	97	92.439	Rattus_norvegicus
ENSMLEG00000032492	RBM12	100	99.790	ENSRBIG00000042965	RBM12	100	99.790	Rhinopithecus_bieti
ENSMLEG00000032492	RBM12	100	99.790	ENSRROG00000037485	RBM12	100	99.790	Rhinopithecus_roxellana
ENSMLEG00000032492	RBM12	100	98.428	ENSSBOG00000027633	RBM12	100	98.428	Saimiri_boliviensis_boliviensis
ENSMLEG00000032492	RBM12	98	85.408	ENSSHAG00000018585	RBM12	100	85.193	Sarcophilus_harrisii
ENSMLEG00000032492	RBM12	98	94.984	ENSSSCG00000036156	RBM12	100	94.237	Sus_scrofa
ENSMLEG00000032492	RBM12	98	79.828	ENSTGUG00000003002	RBM12	100	79.292	Taeniopygia_guttata
ENSMLEG00000032492	RBM12	98	94.635	ENSTTRG00000017035	RBM12	100	93.884	Tursiops_truncatus
ENSMLEG00000032492	RBM12	98	93.562	ENSUAMG00000010430	RBM12	100	94.313	Ursus_americanus
ENSMLEG00000032492	RBM12	86	100.000	ENSVPAG00000003812	RBM12	87	100.000	Vicugna_pacos
ENSMLEG00000032492	RBM12	98	60.232	ENSXETG00000033541	RBM12	74	65.620	Xenopus_tropicalis