EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000033417 (Gene tree)
Gene ID: 105538859
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 3955 bases
Position: chrKN974095.1:3887071-3891025
Accession: 105538859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000018474	APOBEC_N	PF08210.11	1.1e-35	1	1
ENSMLEP00000018470	APOBEC_N	PF08210.11	1.3e-35	1	1
ENSMLEP00000018477	APOBEC_N	PF08210.11	9.4e-28	1	1
ENSMLEP00000018474	APOBEC_C	PF05240.14	1.6e-27	1	1
ENSMLEP00000018470	APOBEC_C	PF05240.14	1.7e-27	1	1
ENSMLEP00000018477	APOBEC_C	PF05240.14	5.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000041955	APOBEC3H-201	927	XM_011978835	ENSMLEP00000018470	211 (aa)	XP_011834225	A0A2K5YSD6
ENSMLET00000041962	APOBEC3H-203	465	XM_011978838	ENSMLEP00000018477	154 (aa)	XP_011834228	A0A2K5YSE0
ENSMLET00000041959	APOBEC3H-202	603	XM_011978837	ENSMLEP00000018474	200 (aa)	XP_011834227	A0A2K5YSH3

Gene Model

Click here to download ENSMLEG00000033417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000033417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000033417	APOBEC3H	69	37.415	ENSMLEG00000039759	-	99	35.088
ENSMLEG00000033417	APOBEC3H	89	37.173	ENSMLEG00000024444	APOBEC3G	89	35.644
ENSMLEG00000033417	APOBEC3H	66	30.303	ENSMLEG00000036301	APOBEC1	55	30.303
ENSMLEG00000033417	APOBEC3H	93	34.826	ENSMLEG00000040938	AICDA	98	34.826
ENSMLEG00000033417	APOBEC3H	90	35.233	ENSMLEG00000004809	-	97	34.848
ENSMLEG00000033417	APOBEC3H	90	36.364	ENSMLEG00000036992	APOBEC3C	95	36.364
ENSMLEG00000033417	APOBEC3H	92	34.899	ENSMLEG00000029642	APOBEC3F	94	35.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000033417	APOBEC3H	100	84.416	ENSG00000100298	APOBEC3H	100	84.416	Homo_sapiens
ENSMLEG00000033417	APOBEC3H	94	49.261	ENSAMEG00000010818	-	80	49.261	Ailuropoda_melanoleuca
ENSMLEG00000033417	APOBEC3H	94	72.772	ENSANAG00000025410	APOBEC3H	96	71.628	Aotus_nancymaae
ENSMLEG00000033417	APOBEC3H	99	51.111	ENSBTAG00000007755	APOBEC3H	94	51.111	Bos_taurus
ENSMLEG00000033417	APOBEC3H	100	73.000	ENSCJAG00000012524	APOBEC3H	100	73.000	Callithrix_jacchus
ENSMLEG00000033417	APOBEC3H	94	50.505	ENSCAFG00000001361	APOBEC3Z3	100	50.505	Canis_familiaris
ENSMLEG00000033417	APOBEC3H	95	48.500	ENSCAFG00020002584	-	94	50.811	Canis_lupus_dingo
ENSMLEG00000033417	APOBEC3H	94	50.270	ENSCHIG00000026580	-	98	50.270	Capra_hircus
ENSMLEG00000033417	APOBEC3H	99	48.684	ENSTSYG00000032894	-	100	51.685	Carlito_syrichta
ENSMLEG00000033417	APOBEC3H	99	53.140	ENSCPOG00000009257	-	93	53.140	Cavia_porcellus
ENSMLEG00000033417	APOBEC3H	100	74.522	ENSCCAG00000008525	APOBEC3H	100	74.522	Cebus_capucinus
ENSMLEG00000033417	APOBEC3H	100	96.753	ENSCATG00000030302	APOBEC3H	100	96.753	Cercocebus_atys
ENSMLEG00000033417	APOBEC3H	95	53.500	ENSCLAG00000016615	-	98	53.500	Chinchilla_lanigera
ENSMLEG00000033417	APOBEC3H	100	91.943	ENSCSAG00000006371	APOBEC3H	100	91.943	Chlorocebus_sabaeus
ENSMLEG00000033417	APOBEC3H	95	53.431	ENSCGRG00001022976	Apobec3	88	53.431	Cricetulus_griseus_chok1gshd
ENSMLEG00000033417	APOBEC3H	95	53.431	ENSCGRG00000005621	Apobec3	88	53.431	Cricetulus_griseus_crigri
ENSMLEG00000033417	APOBEC3H	91	51.724	ENSDORG00000027271	-	99	43.878	Dipodomys_ordii
ENSMLEG00000033417	APOBEC3H	94	50.000	ENSECAG00000007726	APOBEC3H	85	50.000	Equus_caballus
ENSMLEG00000033417	APOBEC3H	94	52.261	ENSFCAG00000005251	APOBEC3Z3	99	51.515	Felis_catus
ENSMLEG00000033417	APOBEC3H	90	54.348	ENSSTOG00000007125	-	85	52.222	Ictidomys_tridecemlineatus
ENSMLEG00000033417	APOBEC3H	92	50.000	ENSJJAG00000016840	-	71	50.000	Jaculus_jaculus
ENSMLEG00000033417	APOBEC3H	94	52.247	ENSLAFG00000027404	-	96	52.247	Loxodonta_africana
ENSMLEG00000033417	APOBEC3H	100	96.682	ENSMFAG00000031827	APOBEC3H	100	96.682	Macaca_fascicularis
ENSMLEG00000033417	APOBEC3H	100	96.104	ENSMMUG00000001016	APOBEC3H	100	96.104	Macaca_mulatta
ENSMLEG00000033417	APOBEC3H	100	96.209	ENSMNEG00000039259	APOBEC3H	100	96.209	Macaca_nemestrina
ENSMLEG00000033417	APOBEC3H	95	51.471	ENSMAUG00000011683	Apobec3	88	51.471	Mesocricetus_auratus
ENSMLEG00000033417	APOBEC3H	94	50.754	ENSMOCG00000021576	Apobec3	84	50.754	Microtus_ochrogaster
ENSMLEG00000033417	APOBEC3H	95	48.276	MGP_CAROLIEiJ_G0020029	Apobec3	99	48.276	Mus_caroli
ENSMLEG00000033417	APOBEC3H	95	46.535	ENSMUSG00000009585	Apobec3	99	46.535	Mus_musculus
ENSMLEG00000033417	APOBEC3H	95	48.293	MGP_PahariEiJ_G0020031	-	88	48.293	Mus_pahari
ENSMLEG00000033417	APOBEC3H	94	46.500	MGP_SPRETEiJ_G0020927	Apobec3	91	47.568	Mus_spretus
ENSMLEG00000033417	APOBEC3H	97	48.322	ENSMPUG00000013239	-	75	50.000	Mustela_putorius_furo
ENSMLEG00000033417	APOBEC3H	96	47.500	ENSNGAG00000018998	Apobec3	100	47.500	Nannospalax_galili
ENSMLEG00000033417	APOBEC3H	100	85.308	ENSNLEG00000015218	-	100	85.308	Nomascus_leucogenys
ENSMLEG00000033417	APOBEC3H	92	43.972	ENSOCUG00000023913	-	89	43.617	Oryctolagus_cuniculus
ENSMLEG00000033417	APOBEC3H	94	50.556	ENSOARG00000016290	APOBEC3F	97	50.556	Ovis_aries
ENSMLEG00000033417	APOBEC3H	100	83.766	ENSPPAG00000036522	APOBEC3H	100	83.766	Pan_paniscus
ENSMLEG00000033417	APOBEC3H	89	36.806	ENSPPRG00000003675	-	81	37.975	Panthera_pardus
ENSMLEG00000033417	APOBEC3H	92	53.804	ENSPPRG00000003941	-	99	51.759	Panthera_pardus
ENSMLEG00000033417	APOBEC3H	92	53.804	ENSPTIG00000010283	-	99	51.759	Panthera_tigris_altaica
ENSMLEG00000033417	APOBEC3H	100	83.766	ENSPTRG00000014390	APOBEC3H	100	83.766	Pan_troglodytes
ENSMLEG00000033417	APOBEC3H	100	92.417	ENSPANG00000010774	APOBEC3H	100	92.417	Papio_anubis
ENSMLEG00000033417	APOBEC3H	95	48.039	ENSPEMG00000000456	Apobec3	82	48.039	Peromyscus_maniculatus_bairdii
ENSMLEG00000033417	APOBEC3H	95	87.065	ENSPPYG00000011834	-	100	85.308	Pongo_abelii
ENSMLEG00000033417	APOBEC3H	89	44.693	ENSPCAG00000015655	-	99	44.751	Procavia_capensis
ENSMLEG00000033417	APOBEC3H	65	36.923	ENSPVAG00000024267	-	95	36.923	Pteropus_vampyrus
ENSMLEG00000033417	APOBEC3H	64	37.500	ENSPVAG00000024161	-	94	37.500	Pteropus_vampyrus
ENSMLEG00000033417	APOBEC3H	90	50.725	ENSPVAG00000009462	-	98	50.562	Pteropus_vampyrus
ENSMLEG00000033417	APOBEC3H	91	51.075	ENSRNOG00000016852	Apobec3	86	51.075	Rattus_norvegicus
ENSMLEG00000033417	APOBEC3H	100	91.000	ENSRBIG00000029088	APOBEC3H	100	91.000	Rhinopithecus_bieti
ENSMLEG00000033417	APOBEC3H	100	90.500	ENSRROG00000024699	APOBEC3H	100	90.500	Rhinopithecus_roxellana
ENSMLEG00000033417	APOBEC3H	98	67.308	ENSSBOG00000030005	APOBEC3H	100	73.224	Saimiri_boliviensis_boliviensis
ENSMLEG00000033417	APOBEC3H	97	52.143	ENSSSCG00000000091	APOBEC3B	92	51.185	Sus_scrofa
ENSMLEG00000033417	APOBEC3H	84	56.154	ENSTBEG00000001532	-	98	52.907	Tupaia_belangeri
ENSMLEG00000033417	APOBEC3H	88	53.676	ENSTTRG00000001266	-	99	51.111	Tursiops_truncatus
ENSMLEG00000033417	APOBEC3H	91	50.340	ENSUAMG00000004427	-	83	50.267	Ursus_americanus
ENSMLEG00000033417	APOBEC3H	95	53.061	ENSUMAG00000014435	-	99	52.525	Ursus_maritimus
ENSMLEG00000033417	APOBEC3H	65	55.385	ENSVPAG00000011108	-	98	55.385	Vicugna_pacos