EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000033436 (Gene tree)
Gene ID: 105545224
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 111464 bases
Position: chrKN972984.1:11415117-11526580
Accession: 105545224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000018744	Ago_hook	PF10427.9	2.2e-21	1	1
ENSMLEP00000018739	Ago_hook	PF10427.9	2.4e-21	1	1
ENSMLEP00000018782	Ago_hook	PF10427.9	3.4e-21	1	1
ENSMLEP00000018791	Ago_hook	PF10427.9	4.9e-21	1	1
ENSMLEP00000018791	RRM_1	PF00076.22	0.00031	1	1
ENSMLEP00000018782	RRM_1	PF00076.22	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000042269	TNRC6C-203	9145	XM_011988095	ENSMLEP00000018782	1725 (aa)	XP_011843485	A0A2K5YT84
ENSMLET00000042226	TNRC6C-201	5832	-	ENSMLEP00000018739	1943 (aa)	-	A0A2K5YTA9
ENSMLET00000042231	TNRC6C-202	5760	-	ENSMLEP00000018744	1919 (aa)	-	A0A2K5YTB2
ENSMLET00000042278	TNRC6C-204	9037	XM_011988168	ENSMLEP00000018791	1689 (aa)	XP_011843558	A0A2K5YT95

Gene Model

Click here to download ENSMLEG00000033436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000033436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000033436	TNRC6C	99	37.188	ENSMLEG00000041780	TNRC6B	91	53.012
ENSMLEG00000033436	TNRC6C	98	43.799	ENSMLEG00000042737	TNRC6A	93	43.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000033436	TNRC6C	100	99.015	ENSG00000078687	TNRC6C	100	99.015	Homo_sapiens
ENSMLEG00000033436	TNRC6C	80	54.617	ENSAPOG00000019749	tnrc6c1	98	49.157	Acanthochromis_polyacanthus
ENSMLEG00000033436	TNRC6C	100	89.667	ENSAMEG00000013756	TNRC6C	99	89.120	Ailuropoda_melanoleuca
ENSMLEG00000033436	TNRC6C	94	50.359	ENSACIG00000008075	tnrc6c1	98	54.440	Amphilophus_citrinellus
ENSMLEG00000033436	TNRC6C	77	68.960	ENSAOCG00000023968	tnrc6c1	99	49.104	Amphiprion_ocellaris
ENSMLEG00000033436	TNRC6C	80	54.334	ENSAPEG00000009020	tnrc6c1	99	49.002	Amphiprion_percula
ENSMLEG00000033436	TNRC6C	100	87.049	ENSAPLG00000005456	TNRC6C	100	86.474	Anas_platyrhynchos
ENSMLEG00000033436	TNRC6C	100	87.731	ENSACAG00000016198	TNRC6C	98	86.823	Anolis_carolinensis
ENSMLEG00000033436	TNRC6C	100	98.147	ENSANAG00000021554	TNRC6C	100	98.147	Aotus_nancymaae
ENSMLEG00000033436	TNRC6C	100	49.390	ENSACLG00000000424	tnrc6c1	99	48.660	Astatotilapia_calliptera
ENSMLEG00000033436	TNRC6C	97	90.961	ENSBTAG00000018658	TNRC6C	100	88.246	Bos_taurus
ENSMLEG00000033436	TNRC6C	100	98.046	ENSCJAG00000019431	TNRC6C	100	98.046	Callithrix_jacchus
ENSMLEG00000033436	TNRC6C	100	91.488	ENSCAFG00000005224	TNRC6C	99	90.999	Canis_familiaris
ENSMLEG00000033436	TNRC6C	100	91.124	ENSCAFG00020006661	TNRC6C	100	90.420	Canis_lupus_dingo
ENSMLEG00000033436	TNRC6C	100	87.633	ENSCHIG00000026004	TNRC6C	100	86.176	Capra_hircus
ENSMLEG00000033436	TNRC6C	100	96.000	ENSTSYG00000005403	TNRC6C	100	96.000	Carlito_syrichta
ENSMLEG00000033436	TNRC6C	100	84.882	ENSCAPG00000007307	TNRC6C	99	83.971	Cavia_aperea
ENSMLEG00000033436	TNRC6C	100	90.172	ENSCPOG00000000467	TNRC6C	100	88.222	Cavia_porcellus
ENSMLEG00000033436	TNRC6C	100	98.319	ENSCCAG00000030524	TNRC6C	100	98.319	Cebus_capucinus
ENSMLEG00000033436	TNRC6C	100	99.942	ENSCATG00000033135	TNRC6C	100	99.942	Cercocebus_atys
ENSMLEG00000033436	TNRC6C	100	93.310	ENSCLAG00000011139	TNRC6C	99	90.573	Chinchilla_lanigera
ENSMLEG00000033436	TNRC6C	100	99.768	ENSCSAG00000005167	TNRC6C	100	99.331	Chlorocebus_sabaeus
ENSMLEG00000033436	TNRC6C	75	91.892	ENSCHOG00000000088	TNRC6C	72	91.011	Choloepus_hoffmanni
ENSMLEG00000033436	TNRC6C	100	88.069	ENSCPBG00000027960	TNRC6C	100	88.069	Chrysemys_picta_bellii
ENSMLEG00000033436	TNRC6C	100	99.177	ENSCANG00000041771	TNRC6C	100	99.177	Colobus_angolensis_palliatus
ENSMLEG00000033436	TNRC6C	100	89.864	ENSCGRG00001022686	Tnrc6c	100	88.686	Cricetulus_griseus_chok1gshd
ENSMLEG00000033436	TNRC6C	100	90.290	ENSCGRG00000018041	Tnrc6c	100	88.686	Cricetulus_griseus_crigri
ENSMLEG00000033436	TNRC6C	80	53.408	ENSCSEG00000012744	tnrc6c1	98	45.914	Cynoglossus_semilaevis
ENSMLEG00000033436	TNRC6C	100	54.252	ENSDARG00000076847	tnrc6c1	99	54.313	Danio_rerio
ENSMLEG00000033436	TNRC6C	100	91.151	ENSDNOG00000003247	TNRC6C	99	88.981	Dasypus_novemcinctus
ENSMLEG00000033436	TNRC6C	100	86.109	ENSDORG00000004558	Tnrc6c	100	85.992	Dipodomys_ordii
ENSMLEG00000033436	TNRC6C	90	82.957	ENSETEG00000005527	TNRC6C	86	83.539	Echinops_telfairi
ENSMLEG00000033436	TNRC6C	100	91.124	ENSEASG00005004799	TNRC6C	100	91.183	Equus_asinus_asinus
ENSMLEG00000033436	TNRC6C	100	91.251	ENSECAG00000012486	TNRC6C	99	90.501	Equus_caballus
ENSMLEG00000033436	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.217	Erinaceus_europaeus
ENSMLEG00000033436	TNRC6C	100	89.309	ENSFCAG00000028358	TNRC6C	100	89.250	Felis_catus
ENSMLEG00000033436	TNRC6C	100	87.067	ENSFALG00000000848	TNRC6C	100	86.387	Ficedula_albicollis
ENSMLEG00000033436	TNRC6C	100	91.356	ENSFDAG00000010368	TNRC6C	100	89.680	Fukomys_damarensis
ENSMLEG00000033436	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	45.943	Fundulus_heteroclitus
ENSMLEG00000033436	TNRC6C	100	88.992	ENSGALG00000001725	TNRC6C	100	88.521	Gallus_gallus
ENSMLEG00000033436	TNRC6C	100	48.868	ENSGAFG00000019019	tnrc6c1	100	49.172	Gambusia_affinis
ENSMLEG00000033436	TNRC6C	95	52.632	ENSGACG00000012320	tnrc6c1	97	47.966	Gasterosteus_aculeatus
ENSMLEG00000033436	TNRC6C	100	87.688	ENSGAGG00000022043	TNRC6C	99	87.486	Gopherus_agassizii
ENSMLEG00000033436	TNRC6C	100	98.302	ENSGGOG00000011304	TNRC6C	100	98.302	Gorilla_gorilla
ENSMLEG00000033436	TNRC6C	100	49.525	ENSHBUG00000010846	tnrc6c1	99	48.784	Haplochromis_burtoni
ENSMLEG00000033436	TNRC6C	100	92.777	ENSHGLG00000004809	TNRC6C	99	89.953	Heterocephalus_glaber_female
ENSMLEG00000033436	TNRC6C	100	91.750	ENSHGLG00100012597	TNRC6C	99	90.109	Heterocephalus_glaber_male
ENSMLEG00000033436	TNRC6C	99	51.068	ENSIPUG00000000818	tnrc6c1	98	51.605	Ictalurus_punctatus
ENSMLEG00000033436	TNRC6C	100	91.189	ENSSTOG00000009101	TNRC6C	100	88.852	Ictidomys_tridecemlineatus
ENSMLEG00000033436	TNRC6C	100	88.922	ENSJJAG00000017055	Tnrc6c	99	87.097	Jaculus_jaculus
ENSMLEG00000033436	TNRC6C	99	48.089	ENSKMAG00000021023	tnrc6c1	100	50.690	Kryptolebias_marmoratus
ENSMLEG00000033436	TNRC6C	100	75.601	ENSLACG00000015283	TNRC6C	100	74.138	Latimeria_chalumnae
ENSMLEG00000033436	TNRC6C	99	56.641	ENSLOCG00000013377	tnrc6c1	99	55.604	Lepisosteus_oculatus
ENSMLEG00000033436	TNRC6C	100	90.748	ENSLAFG00000011122	TNRC6C	99	88.958	Loxodonta_africana
ENSMLEG00000033436	TNRC6C	100	99.948	ENSMFAG00000043943	TNRC6C	100	99.948	Macaca_fascicularis
ENSMLEG00000033436	TNRC6C	100	99.942	ENSMMUG00000011924	TNRC6C	100	99.941	Macaca_mulatta
ENSMLEG00000033436	TNRC6C	100	99.897	ENSMNEG00000030405	TNRC6C	100	99.897	Macaca_nemestrina
ENSMLEG00000033436	TNRC6C	94	55.108	ENSMAMG00000023613	tnrc6c1	100	51.314	Mastacembelus_armatus
ENSMLEG00000033436	TNRC6C	100	49.390	ENSMZEG00005010920	tnrc6c1	99	48.660	Maylandia_zebra
ENSMLEG00000033436	TNRC6C	100	80.183	ENSMGAG00000003906	TNRC6C	100	80.662	Meleagris_gallopavo
ENSMLEG00000033436	TNRC6C	100	89.629	ENSMAUG00000021618	Tnrc6c	100	89.570	Mesocricetus_auratus
ENSMLEG00000033436	TNRC6C	100	94.377	ENSMICG00000003952	TNRC6C	100	94.261	Microcebus_murinus
ENSMLEG00000033436	TNRC6C	100	91.829	ENSMOCG00000015879	Tnrc6c	100	89.344	Microtus_ochrogaster
ENSMLEG00000033436	TNRC6C	79	55.899	ENSMMOG00000005203	tnrc6c1	100	50.480	Mola_mola
ENSMLEG00000033436	TNRC6C	100	87.176	ENSMODG00000001785	TNRC6C	99	85.231	Monodelphis_domestica
ENSMLEG00000033436	TNRC6C	100	91.297	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.839	Mus_caroli
ENSMLEG00000033436	TNRC6C	100	91.060	ENSMUSG00000025571	Tnrc6c	100	88.615	Mus_musculus
ENSMLEG00000033436	TNRC6C	100	91.001	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.559	Mus_pahari
ENSMLEG00000033436	TNRC6C	100	91.119	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.671	Mus_spretus
ENSMLEG00000033436	TNRC6C	100	89.056	ENSMPUG00000013348	TNRC6C	98	88.658	Mustela_putorius_furo
ENSMLEG00000033436	TNRC6C	100	82.377	ENSMLUG00000014431	TNRC6C	98	82.047	Myotis_lucifugus
ENSMLEG00000033436	TNRC6C	100	90.748	ENSNGAG00000012203	Tnrc6c	99	89.167	Nannospalax_galili
ENSMLEG00000033436	TNRC6C	100	50.028	ENSNBRG00000005344	tnrc6c1	99	49.232	Neolamprologus_brichardi
ENSMLEG00000033436	TNRC6C	100	95.788	ENSNLEG00000000047	TNRC6C	99	96.393	Nomascus_leucogenys
ENSMLEG00000033436	TNRC6C	97	81.879	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSMLEG00000033436	TNRC6C	100	92.066	ENSODEG00000012499	TNRC6C	100	92.244	Octodon_degus
ENSMLEG00000033436	TNRC6C	94	51.399	ENSONIG00000002210	tnrc6c1	96	52.326	Oreochromis_niloticus
ENSMLEG00000033436	TNRC6C	99	63.546	ENSOANG00000009758	-	100	61.154	Ornithorhynchus_anatinus
ENSMLEG00000033436	TNRC6C	81	88.421	ENSOCUG00000006122	TNRC6C	95	79.452	Oryctolagus_cuniculus
ENSMLEG00000033436	TNRC6C	91	50.306	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSMLEG00000033436	TNRC6C	92	50.180	ENSORLG00020016510	tnrc6c1	100	49.335	Oryzias_latipes_hni
ENSMLEG00000033436	TNRC6C	72	45.305	ENSORLG00015000171	tnrc6c1	98	44.921	Oryzias_latipes_hsok
ENSMLEG00000033436	TNRC6C	92	51.050	ENSOMEG00000000357	tnrc6c1	99	48.173	Oryzias_melastigma
ENSMLEG00000033436	TNRC6C	100	93.159	ENSOGAG00000007197	TNRC6C	100	93.159	Otolemur_garnettii
ENSMLEG00000033436	TNRC6C	96	84.867	ENSOARG00000006041	TNRC6C	97	85.052	Ovis_aries
ENSMLEG00000033436	TNRC6C	100	98.957	ENSPPAG00000027160	TNRC6C	100	98.957	Pan_paniscus
ENSMLEG00000033436	TNRC6C	100	89.309	ENSPPRG00000018881	TNRC6C	100	89.250	Panthera_pardus
ENSMLEG00000033436	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	81	96.429	Panthera_tigris_altaica
ENSMLEG00000033436	TNRC6C	100	98.957	ENSPTRG00000009699	TNRC6C	100	98.957	Pan_troglodytes
ENSMLEG00000033436	TNRC6C	100	99.897	ENSPANG00000019994	TNRC6C	100	99.897	Papio_anubis
ENSMLEG00000033436	TNRC6C	96	52.779	ENSPKIG00000005428	tnrc6c1	100	51.688	Paramormyrops_kingsleyae
ENSMLEG00000033436	TNRC6C	100	86.458	ENSPSIG00000018069	TNRC6C	100	84.060	Pelodiscus_sinensis
ENSMLEG00000033436	TNRC6C	79	54.194	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSMLEG00000033436	TNRC6C	100	90.925	ENSPEMG00000009785	Tnrc6c	100	88.509	Peromyscus_maniculatus_bairdii
ENSMLEG00000033436	TNRC6C	58	86.154	ENSPCIG00000017421	-	99	86.008	Phascolarctos_cinereus
ENSMLEG00000033436	TNRC6C	100	48.681	ENSPFOG00000012560	tnrc6c1	97	57.427	Poecilia_formosa
ENSMLEG00000033436	TNRC6C	100	50.000	ENSPLAG00000021055	tnrc6c1	100	49.916	Poecilia_latipinna
ENSMLEG00000033436	TNRC6C	100	99.246	ENSPPYG00000008679	TNRC6C	99	98.765	Pongo_abelii
ENSMLEG00000033436	TNRC6C	93	92.654	ENSPCAG00000012510	TNRC6C	91	92.654	Procavia_capensis
ENSMLEG00000033436	TNRC6C	100	94.841	ENSPCOG00000021451	TNRC6C	100	94.841	Propithecus_coquereli
ENSMLEG00000033436	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSMLEG00000033436	TNRC6C	100	49.194	ENSPNYG00000014477	tnrc6c1	99	48.421	Pundamilia_nyererei
ENSMLEG00000033436	TNRC6C	100	90.420	ENSRNOG00000022395	Tnrc6c	100	90.420	Rattus_norvegicus
ENSMLEG00000033436	TNRC6C	100	99.420	ENSRBIG00000027777	TNRC6C	100	99.420	Rhinopithecus_bieti
ENSMLEG00000033436	TNRC6C	100	99.537	ENSRROG00000042912	TNRC6C	100	99.537	Rhinopithecus_roxellana
ENSMLEG00000033436	TNRC6C	100	97.913	ENSSBOG00000023981	TNRC6C	100	97.913	Saimiri_boliviensis_boliviensis
ENSMLEG00000033436	TNRC6C	54	90.378	ENSSHAG00000018330	-	100	89.730	Sarcophilus_harrisii
ENSMLEG00000033436	TNRC6C	76	56.394	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSMLEG00000033436	TNRC6C	93	57.641	ENSSFOG00015006475	tnrc6c1	99	51.752	Scleropages_formosus
ENSMLEG00000033436	TNRC6C	100	48.947	ENSSMAG00000012761	tnrc6c1	99	50.546	Scophthalmus_maximus
ENSMLEG00000033436	TNRC6C	100	50.828	ENSSDUG00000002366	tnrc6c1	99	49.552	Seriola_dumerili
ENSMLEG00000033436	TNRC6C	100	49.057	ENSSLDG00000025613	tnrc6c1	100	50.139	Seriola_lalandi_dorsalis
ENSMLEG00000033436	TNRC6C	91	89.655	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSMLEG00000033436	TNRC6C	83	86.944	ENSSPUG00000007341	TNRC6C	98	87.014	Sphenodon_punctatus
ENSMLEG00000033436	TNRC6C	79	54.089	ENSSPAG00000014977	tnrc6c1	97	49.196	Stegastes_partitus
ENSMLEG00000033436	TNRC6C	97	90.722	ENSSSCG00000034373	TNRC6C	100	87.987	Sus_scrofa
ENSMLEG00000033436	TNRC6C	100	88.527	ENSTGUG00000007733	TNRC6C	100	86.130	Taeniopygia_guttata
ENSMLEG00000033436	TNRC6C	79	54.986	ENSTRUG00000011685	tnrc6c1	100	49.834	Takifugu_rubripes
ENSMLEG00000033436	TNRC6C	89	52.867	ENSTNIG00000005273	tnrc6c1	100	60.980	Tetraodon_nigroviridis
ENSMLEG00000033436	TNRC6C	67	82.058	ENSTBEG00000005046	TNRC6C	100	82.410	Tupaia_belangeri
ENSMLEG00000033436	TNRC6C	100	90.952	ENSTTRG00000010828	TNRC6C	97	91.011	Tursiops_truncatus
ENSMLEG00000033436	TNRC6C	100	89.292	ENSUMAG00000013614	TNRC6C	99	89.652	Ursus_maritimus
ENSMLEG00000033436	TNRC6C	52	80.979	ENSVPAG00000006765	-	99	80.985	Vicugna_pacos
ENSMLEG00000033436	TNRC6C	100	91.780	ENSVVUG00000015268	TNRC6C	100	91.780	Vulpes_vulpes
ENSMLEG00000033436	TNRC6C	100	75.264	ENSXETG00000019470	tnrc6c	100	74.618	Xenopus_tropicalis
ENSMLEG00000033436	TNRC6C	100	49.828	ENSXMAG00000025971	tnrc6c1	100	49.089	Xiphophorus_maculatus