EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000033618 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 22471 bases
Position: chrKN974639.1:2079262-2101732
Accession: 105542043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000018979	CSD	PF00313.22	5.7e-26	1	1
ENSMLEP00000018977	CSD	PF00313.22	6.7e-26	1	1
ENSMLEP00000019004	CSD	PF00313.22	7.1e-26	1	1
ENSMLEP00000019028	CSD	PF00313.22	7.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000042516	YBX3-204	1095	XM_011983403	ENSMLEP00000019028	364 (aa)	XP_011838793	A0A2K5YTY1
ENSMLET00000042467	YBX3-202	855	-	ENSMLEP00000018979	284 (aa)	-	A0A2K5YTW9
ENSMLET00000042465	YBX3-201	1062	-	ENSMLEP00000018977	353 (aa)	-	A0A2K5YTT5
ENSMLET00000042492	YBX3-203	1083	-	ENSMLEP00000019004	360 (aa)	-	A0A2K5YTZ3

Gene Model

Click here to download ENSMLEG00000033618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000033618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000033618	YBX3	79	98.606	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSMLEG00000033618	YBX3	94	82.436	ENSAMEG00000009393	YBX3	100	82.906	Ailuropoda_melanoleuca
ENSMLEG00000033618	YBX3	76	98.077	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSMLEG00000033618	YBX3	99	80.000	ENSANAG00000024492	-	91	97.561	Aotus_nancymaae
ENSMLEG00000033618	YBX3	76	68.750	ENSANAG00000033366	-	86	83.846	Aotus_nancymaae
ENSMLEG00000033618	YBX3	81	90.210	ENSBTAG00000009663	YBX3	89	77.976	Bos_taurus
ENSMLEG00000033618	YBX3	75	92.405	ENSCJAG00000033824	-	84	91.781	Callithrix_jacchus
ENSMLEG00000033618	YBX3	79	96.864	ENSCJAG00000021660	-	95	82.621	Callithrix_jacchus
ENSMLEG00000033618	YBX3	82	93.426	ENSCAFG00000013401	YBX3	100	95.392	Canis_familiaris
ENSMLEG00000033618	YBX3	81	90.909	ENSCAFG00020006412	YBX3	91	81.050	Canis_lupus_dingo
ENSMLEG00000033618	YBX3	81	90.210	ENSCHIG00000010863	YBX3	94	80.655	Capra_hircus
ENSMLEG00000033618	YBX3	96	85.632	ENSTSYG00000004204	-	96	91.111	Carlito_syrichta
ENSMLEG00000033618	YBX3	76	81.651	ENSTSYG00000035821	-	70	95.455	Carlito_syrichta
ENSMLEG00000033618	YBX3	83	88.396	ENSCAPG00000015039	YBX3	97	86.957	Cavia_aperea
ENSMLEG00000033618	YBX3	81	88.462	ENSCPOG00000011329	YBX3	84	88.462	Cavia_porcellus
ENSMLEG00000033618	YBX3	79	96.864	ENSCCAG00000016469	YBX3	94	82.906	Cebus_capucinus
ENSMLEG00000033618	YBX3	79	99.652	ENSCATG00000034411	YBX3	92	86.006	Cercocebus_atys
ENSMLEG00000033618	YBX3	84	88.215	ENSCLAG00000016030	YBX3	97	88.215	Chinchilla_lanigera
ENSMLEG00000033618	YBX3	79	99.303	ENSCSAG00000008744	YBX3	92	85.714	Chlorocebus_sabaeus
ENSMLEG00000033618	YBX3	81	79.443	ENSCPBG00000014147	YBX3	94	70.501	Chrysemys_picta_bellii
ENSMLEG00000033618	YBX3	58	57.738	ENSCING00000010654	yb1/2/3	72	49.528	Ciona_intestinalis
ENSMLEG00000033618	YBX3	81	98.258	ENSCANG00000036801	YBX3	91	98.606	Colobus_angolensis_palliatus
ENSMLEG00000033618	YBX3	81	91.608	ENSCGRG00001016148	Ybx3	93	82.006	Cricetulus_griseus_chok1gshd
ENSMLEG00000033618	YBX3	83	89.899	ENSCGRG00000004563	Ybx3	100	89.899	Cricetulus_griseus_crigri
ENSMLEG00000033618	YBX3	80	92.254	ENSDORG00000009103	Ybx3	92	84.639	Dipodomys_ordii
ENSMLEG00000033618	YBX3	80	84.211	ENSETEG00000002557	YBX3	99	83.803	Echinops_telfairi
ENSMLEG00000033618	YBX3	81	87.063	ENSEASG00005014726	YBX3	87	90.566	Equus_asinus_asinus
ENSMLEG00000033618	YBX3	81	90.909	ENSECAG00000013777	YBX3	92	81.341	Equus_caballus
ENSMLEG00000033618	YBX3	78	91.549	ENSEEUG00000010415	YBX3	100	91.549	Erinaceus_europaeus
ENSMLEG00000033618	YBX3	79	94.774	ENSFCAG00000027748	YBX3	94	82.051	Felis_catus
ENSMLEG00000033618	YBX3	76	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSMLEG00000033618	YBX3	86	83.168	ENSFDAG00000021192	YBX3	95	85.085	Fukomys_damarensis
ENSMLEG00000033618	YBX3	76	82.028	ENSGALG00000031890	YBX3	69	98.864	Gallus_gallus
ENSMLEG00000033618	YBX3	76	84.793	ENSGAGG00000017780	YBX3	75	84.793	Gopherus_agassizii
ENSMLEG00000033618	YBX3	79	98.606	ENSGGOG00000001352	YBX3	92	85.131	Gorilla_gorilla
ENSMLEG00000033618	YBX3	75	78.195	ENSHGLG00000015495	-	99	66.469	Heterocephalus_glaber_female
ENSMLEG00000033618	YBX3	81	75.172	ENSHGLG00000014798	-	85	75.862	Heterocephalus_glaber_female
ENSMLEG00000033618	YBX3	81	90.086	ENSHGLG00100003589	YBX3	93	85.345	Heterocephalus_glaber_male
ENSMLEG00000033618	YBX3	81	87.762	ENSSTOG00000032577	-	81	87.762	Ictidomys_tridecemlineatus
ENSMLEG00000033618	YBX3	84	85.763	ENSSTOG00000002108	-	98	81.250	Ictidomys_tridecemlineatus
ENSMLEG00000033618	YBX3	81	67.708	ENSJJAG00000014239	Ybx3	92	83.750	Jaculus_jaculus
ENSMLEG00000033618	YBX3	81	94.056	ENSLAFG00000017247	YBX3	95	82.000	Loxodonta_africana
ENSMLEG00000033618	YBX3	79	98.955	ENSMFAG00000039369	YBX3	92	85.423	Macaca_fascicularis
ENSMLEG00000033618	YBX3	81	98.606	ENSMMUG00000022469	YBX3	88	98.955	Macaca_mulatta
ENSMLEG00000033618	YBX3	79	98.955	ENSMNEG00000045109	YBX3	94	84.615	Macaca_nemestrina
ENSMLEG00000033618	YBX3	74	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSMLEG00000033618	YBX3	93	82.121	ENSMAUG00000012185	Ybx3	89	91.259	Mesocricetus_auratus
ENSMLEG00000033618	YBX3	76	79.724	ENSMICG00000031459	-	76	77.419	Microcebus_murinus
ENSMLEG00000033618	YBX3	81	95.105	ENSMICG00000038002	-	94	83.429	Microcebus_murinus
ENSMLEG00000033618	YBX3	81	91.608	ENSMOCG00000016291	Ybx3	93	91.608	Microtus_ochrogaster
ENSMLEG00000033618	YBX3	83	84.354	ENSMODG00000018248	YBX3	93	84.354	Monodelphis_domestica
ENSMLEG00000033618	YBX3	81	91.608	MGP_CAROLIEiJ_G0028947	Ybx3	93	82.006	Mus_caroli
ENSMLEG00000033618	YBX3	81	91.608	ENSMUSG00000030189	Ybx3	93	82.006	Mus_musculus
ENSMLEG00000033618	YBX3	81	91.608	MGP_PahariEiJ_G0022709	Ybx3	93	82.006	Mus_pahari
ENSMLEG00000033618	YBX3	81	91.958	MGP_SPRETEiJ_G0029994	Ybx3	93	82.301	Mus_spretus
ENSMLEG00000033618	YBX3	75	83.036	ENSMPUG00000011810	YBX3	94	65.460	Mustela_putorius_furo
ENSMLEG00000033618	YBX3	75	92.193	ENSMLUG00000007476	YBX3	100	90.706	Myotis_lucifugus
ENSMLEG00000033618	YBX3	80	88.732	ENSNGAG00000000710	Ybx3	88	87.442	Nannospalax_galili
ENSMLEG00000033618	YBX3	81	94.425	ENSNLEG00000034844	YBX3	81	94.774	Nomascus_leucogenys
ENSMLEG00000033618	YBX3	79	83.566	ENSODEG00000017957	YBX3	96	75.988	Octodon_degus
ENSMLEG00000033618	YBX3	81	88.112	ENSOCUG00000001889	YBX3	83	88.112	Oryctolagus_cuniculus
ENSMLEG00000033618	YBX3	81	92.833	ENSOGAG00000013245	YBX3	94	82.073	Otolemur_garnettii
ENSMLEG00000033618	YBX3	70	98.864	ENSOARG00000020919	YBX3	97	82.639	Ovis_aries
ENSMLEG00000033618	YBX3	79	98.606	ENSPPAG00000039068	YBX3	80	98.606	Pan_paniscus
ENSMLEG00000033618	YBX3	79	94.425	ENSPPRG00000005859	YBX3	94	81.766	Panthera_pardus
ENSMLEG00000033618	YBX3	99	85.042	ENSPTIG00000005322	YBX3	100	84.211	Panthera_tigris_altaica
ENSMLEG00000033618	YBX3	79	98.606	ENSPTRG00000004681	YBX3	92	85.131	Pan_troglodytes
ENSMLEG00000033618	YBX3	79	99.652	ENSPANG00000010280	YBX3	92	86.006	Papio_anubis
ENSMLEG00000033618	YBX3	76	84.651	ENSPSIG00000009247	YBX3	95	100.000	Pelodiscus_sinensis
ENSMLEG00000033618	YBX3	76	91.705	ENSPEMG00000010391	-	82	91.705	Peromyscus_maniculatus_bairdii
ENSMLEG00000033618	YBX3	81	91.958	ENSPEMG00000012132	-	90	91.958	Peromyscus_maniculatus_bairdii
ENSMLEG00000033618	YBX3	73	81.853	ENSPCIG00000029949	YBX3	100	81.853	Phascolarctos_cinereus
ENSMLEG00000033618	YBX3	79	98.258	ENSPPYG00000004279	YBX3	92	84.840	Pongo_abelii
ENSMLEG00000033618	YBX3	59	93.720	ENSPCAG00000001397	YBX3	70	93.564	Procavia_capensis
ENSMLEG00000033618	YBX3	50	90.857	ENSPCOG00000011663	YBX3	67	90.857	Propithecus_coquereli
ENSMLEG00000033618	YBX3	81	77.003	ENSPVAG00000006740	YBX3	69	80.769	Pteropus_vampyrus
ENSMLEG00000033618	YBX3	81	91.958	ENSRNOG00000005480	Ybx3	93	82.301	Rattus_norvegicus
ENSMLEG00000033618	YBX3	79	98.606	ENSRBIG00000039208	YBX3	92	85.131	Rhinopithecus_bieti
ENSMLEG00000033618	YBX3	79	98.606	ENSRROG00000029638	YBX3	92	85.131	Rhinopithecus_roxellana
ENSMLEG00000033618	YBX3	100	88.366	ENSSBOG00000030573	YBX3	100	92.754	Saimiri_boliviensis_boliviensis
ENSMLEG00000033618	YBX3	69	98.837	ENSSHAG00000003262	YBX3	98	81.787	Sarcophilus_harrisii
ENSMLEG00000033618	YBX3	79	94.077	ENSSSCG00000000633	YBX3	75	94.077	Sus_scrofa
ENSMLEG00000033618	YBX3	75	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSMLEG00000033618	YBX3	94	82.059	ENSTBEG00000012570	YBX3	93	82.353	Tupaia_belangeri
ENSMLEG00000033618	YBX3	74	82.331	ENSTTRG00000008045	YBX3	100	83.835	Tursiops_truncatus
ENSMLEG00000033618	YBX3	78	89.892	ENSUAMG00000016662	YBX3	100	89.892	Ursus_americanus
ENSMLEG00000033618	YBX3	84	93.355	ENSUMAG00000016118	YBX3	99	93.355	Ursus_maritimus
ENSMLEG00000033618	YBX3	61	100.000	ENSVPAG00000000876	YBX3	100	71.831	Vicugna_pacos
ENSMLEG00000033618	YBX3	78	91.336	ENSVVUG00000004956	YBX3	100	91.336	Vulpes_vulpes
ENSMLEG00000033618	YBX3	76	71.233	ENSXETG00000016239	ybx3	88	66.210	Xenopus_tropicalis