EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000033660 (Gene tree)
Gene ID: 105553772
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 397090 bases
Position: chrKN978337.1:1465173-1862262
Accession: 105553772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000018926	CMS1	PF14617.6	1.7e-32	1	1
ENSMLEP00000018930	CMS1	PF14617.6	2.2e-32	1	1
ENSMLEP00000018926	DEAD	PF00270.29	7e-06	1	1
ENSMLEP00000018930	DEAD	PF00270.29	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000042418	CMSS1-202	840	XM_011999907	ENSMLEP00000018930	279 (aa)	XP_011855297	A0A2K5YTR6
ENSMLET00000042414	CMSS1-201	1059	XM_011999908	ENSMLEP00000018926	261 (aa)	XP_011855298	A0A2K5YTN9

Gene Model

Click here to download ENSMLEG00000033660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000033660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000033660	CMSS1	100	96.169	ENSG00000184220	CMSS1	100	96.169	Homo_sapiens
ENSMLEG00000033660	CMSS1	77	64.356	ENSAPOG00000010604	cmss1	82	64.356	Acanthochromis_polyacanthus
ENSMLEG00000033660	CMSS1	99	89.189	ENSAMEG00000004092	CMSS1	100	89.189	Ailuropoda_melanoleuca
ENSMLEG00000033660	CMSS1	77	53.960	ENSACIG00000021854	cmss1	86	48.361	Amphilophus_citrinellus
ENSMLEG00000033660	CMSS1	100	50.495	ENSAOCG00000013361	cmss1	100	51.839	Amphiprion_ocellaris
ENSMLEG00000033660	CMSS1	77	64.356	ENSAPEG00000005829	cmss1	100	51.667	Amphiprion_percula
ENSMLEG00000033660	CMSS1	100	51.557	ENSATEG00000008209	cmss1	100	53.082	Anabas_testudineus
ENSMLEG00000033660	CMSS1	88	68.696	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSMLEG00000033660	CMSS1	99	61.194	ENSACAG00000011065	CMSS1	99	60.741	Anolis_carolinensis
ENSMLEG00000033660	CMSS1	100	93.929	ENSANAG00000023565	CMSS1	100	93.929	Aotus_nancymaae
ENSMLEG00000033660	CMSS1	100	48.684	ENSACLG00000027294	cmss1	100	49.671	Astatotilapia_calliptera
ENSMLEG00000033660	CMSS1	100	46.000	ENSAMXG00000002046	cmss1	100	47.297	Astyanax_mexicanus
ENSMLEG00000033660	CMSS1	100	87.097	ENSBTAG00000013663	CMSS1	100	87.097	Bos_taurus
ENSMLEG00000033660	CMSS1	100	93.929	ENSCJAG00000000610	CMSS1	100	93.929	Callithrix_jacchus
ENSMLEG00000033660	CMSS1	100	90.038	ENSCAFG00000009230	CMSS1	95	90.038	Canis_familiaris
ENSMLEG00000033660	CMSS1	89	84.052	ENSCAFG00020024156	-	76	80.408	Canis_lupus_dingo
ENSMLEG00000033660	CMSS1	98	90.661	ENSCAFG00020009464	-	95	90.347	Canis_lupus_dingo
ENSMLEG00000033660	CMSS1	98	88.327	ENSCHIG00000013003	CMSS1	93	88.327	Capra_hircus
ENSMLEG00000033660	CMSS1	99	89.961	ENSTSYG00000009266	CMSS1	99	89.961	Carlito_syrichta
ENSMLEG00000033660	CMSS1	85	73.246	ENSCAPG00000013584	CMSS1	100	73.684	Cavia_aperea
ENSMLEG00000033660	CMSS1	100	87.097	ENSCPOG00000014680	CMSS1	100	87.097	Cavia_porcellus
ENSMLEG00000033660	CMSS1	100	94.656	ENSCCAG00000034685	CMSS1	100	94.656	Cebus_capucinus
ENSMLEG00000033660	CMSS1	100	99.617	ENSCATG00000031980	CMSS1	100	99.617	Cercocebus_atys
ENSMLEG00000033660	CMSS1	88	93.450	ENSCLAG00000011241	CMSS1	98	93.450	Chinchilla_lanigera
ENSMLEG00000033660	CMSS1	94	99.592	ENSCSAG00000006024	CMSS1	100	99.592	Chlorocebus_sabaeus
ENSMLEG00000033660	CMSS1	100	68.817	ENSCHOG00000012098	CMSS1	100	68.817	Choloepus_hoffmanni
ENSMLEG00000033660	CMSS1	72	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSMLEG00000033660	CMSS1	100	98.925	ENSCANG00000031337	CMSS1	100	98.925	Colobus_angolensis_palliatus
ENSMLEG00000033660	CMSS1	100	82.079	ENSCGRG00001014305	Cmss1	100	82.079	Cricetulus_griseus_chok1gshd
ENSMLEG00000033660	CMSS1	98	83.203	ENSCGRG00000006722	Cmss1	99	83.203	Cricetulus_griseus_crigri
ENSMLEG00000033660	CMSS1	100	50.505	ENSCSEG00000004958	cmss1	100	50.658	Cynoglossus_semilaevis
ENSMLEG00000033660	CMSS1	100	50.865	ENSCVAG00000005039	cmss1	100	52.234	Cyprinodon_variegatus
ENSMLEG00000033660	CMSS1	100	47.138	ENSDARG00000112579	cmss1	100	46.918	Danio_rerio
ENSMLEG00000033660	CMSS1	100	85.115	ENSDNOG00000040418	CMSS1	93	85.115	Dasypus_novemcinctus
ENSMLEG00000033660	CMSS1	100	86.738	ENSDORG00000010461	Cmss1	100	86.738	Dipodomys_ordii
ENSMLEG00000033660	CMSS1	51	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSMLEG00000033660	CMSS1	99	83.462	ENSEASG00005010966	CMSS1	99	92.237	Equus_asinus_asinus
ENSMLEG00000033660	CMSS1	98	89.883	ENSECAG00000015662	CMSS1	99	91.593	Equus_caballus
ENSMLEG00000033660	CMSS1	100	56.272	ENSEEUG00000007624	-	100	56.272	Erinaceus_europaeus
ENSMLEG00000033660	CMSS1	92	57.083	ENSELUG00000019459	cmss1	100	51.000	Esox_lucius
ENSMLEG00000033660	CMSS1	100	92.115	ENSFCAG00000044577	CMSS1	100	92.115	Felis_catus
ENSMLEG00000033660	CMSS1	91	65.401	ENSFALG00000005816	CMSS1	100	65.401	Ficedula_albicollis
ENSMLEG00000033660	CMSS1	87	90.789	ENSFDAG00000012577	CMSS1	100	90.789	Fukomys_damarensis
ENSMLEG00000033660	CMSS1	87	60.173	ENSFHEG00000012008	cmss1	95	60.173	Fundulus_heteroclitus
ENSMLEG00000033660	CMSS1	99	49.492	ENSGMOG00000016729	cmss1	100	52.083	Gadus_morhua
ENSMLEG00000033660	CMSS1	100	63.019	ENSGALG00000015267	CMSS1	100	63.359	Gallus_gallus
ENSMLEG00000033660	CMSS1	79	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSMLEG00000033660	CMSS1	99	48.227	ENSGACG00000002798	cmss1	100	49.645	Gasterosteus_aculeatus
ENSMLEG00000033660	CMSS1	91	70.042	ENSGAGG00000019861	CMSS1	100	62.724	Gopherus_agassizii
ENSMLEG00000033660	CMSS1	100	97.318	ENSGGOG00000014125	CMSS1	100	97.318	Gorilla_gorilla
ENSMLEG00000033660	CMSS1	100	48.845	ENSHBUG00000008431	cmss1	100	49.505	Haplochromis_burtoni
ENSMLEG00000033660	CMSS1	97	84.980	ENSHGLG00000019481	CMSS1	100	84.980	Heterocephalus_glaber_female
ENSMLEG00000033660	CMSS1	98	85.214	ENSHGLG00100010314	CMSS1	100	85.214	Heterocephalus_glaber_male
ENSMLEG00000033660	CMSS1	100	52.980	ENSHCOG00000003222	cmss1	100	53.000	Hippocampus_comes
ENSMLEG00000033660	CMSS1	100	48.276	ENSIPUG00000011591	cmss1	100	48.630	Ictalurus_punctatus
ENSMLEG00000033660	CMSS1	100	89.964	ENSSTOG00000019366	CMSS1	100	89.964	Ictidomys_tridecemlineatus
ENSMLEG00000033660	CMSS1	100	83.154	ENSJJAG00000014894	Cmss1	100	83.154	Jaculus_jaculus
ENSMLEG00000033660	CMSS1	77	53.960	ENSKMAG00000002390	cmss1	81	53.960	Kryptolebias_marmoratus
ENSMLEG00000033660	CMSS1	85	53.750	ENSLBEG00000006298	cmss1	83	59.606	Labrus_bergylta
ENSMLEG00000033660	CMSS1	87	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSMLEG00000033660	CMSS1	100	51.056	ENSLOCG00000009391	cmss1	100	51.761	Lepisosteus_oculatus
ENSMLEG00000033660	CMSS1	87	91.228	ENSLAFG00000017509	CMSS1	100	91.228	Loxodonta_africana
ENSMLEG00000033660	CMSS1	100	99.283	ENSMFAG00000045006	CMSS1	100	99.283	Macaca_fascicularis
ENSMLEG00000033660	CMSS1	100	98.925	ENSMMUG00000002939	CMSS1	100	98.925	Macaca_mulatta
ENSMLEG00000033660	CMSS1	100	98.925	ENSMNEG00000031315	CMSS1	100	98.925	Macaca_nemestrina
ENSMLEG00000033660	CMSS1	100	51.505	ENSMAMG00000017176	cmss1	100	52.218	Mastacembelus_armatus
ENSMLEG00000033660	CMSS1	100	48.684	ENSMZEG00005021886	cmss1	100	49.671	Maylandia_zebra
ENSMLEG00000033660	CMSS1	87	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSMLEG00000033660	CMSS1	100	60.215	ENSMAUG00000020609	Cmss1	100	60.215	Mesocricetus_auratus
ENSMLEG00000033660	CMSS1	100	91.756	ENSMICG00000048977	CMSS1	100	91.756	Microcebus_murinus
ENSMLEG00000033660	CMSS1	100	81.004	ENSMOCG00000021937	Cmss1	100	81.004	Microtus_ochrogaster
ENSMLEG00000033660	CMSS1	77	62.871	ENSMMOG00000019794	cmss1	95	57.940	Mola_mola
ENSMLEG00000033660	CMSS1	97	73.228	ENSMODG00000002275	CMSS1	97	71.923	Monodelphis_domestica
ENSMLEG00000033660	CMSS1	100	52.055	ENSMALG00000004250	cmss1	100	51.546	Monopterus_albus
ENSMLEG00000033660	CMSS1	100	81.786	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.786	Mus_caroli
ENSMLEG00000033660	CMSS1	100	82.500	ENSMUSG00000022748	Cmss1	100	82.500	Mus_musculus
ENSMLEG00000033660	CMSS1	100	81.071	MGP_PahariEiJ_G0016524	Cmss1	100	81.071	Mus_pahari
ENSMLEG00000033660	CMSS1	100	81.786	MGP_SPRETEiJ_G0021724	Cmss1	100	81.786	Mus_spretus
ENSMLEG00000033660	CMSS1	99	91.923	ENSMPUG00000011324	CMSS1	100	91.923	Mustela_putorius_furo
ENSMLEG00000033660	CMSS1	99	90.805	ENSMLUG00000001131	CMSS1	99	91.154	Myotis_lucifugus
ENSMLEG00000033660	CMSS1	99	85.271	ENSNGAG00000020316	Cmss1	100	84.229	Nannospalax_galili
ENSMLEG00000033660	CMSS1	100	48.355	ENSNBRG00000003095	cmss1	100	49.671	Neolamprologus_brichardi
ENSMLEG00000033660	CMSS1	100	98.084	ENSNLEG00000034172	CMSS1	100	98.084	Nomascus_leucogenys
ENSMLEG00000033660	CMSS1	87	66.228	ENSMEUG00000014505	CMSS1	100	66.228	Notamacropus_eugenii
ENSMLEG00000033660	CMSS1	100	91.039	ENSOPRG00000002986	CMSS1	100	91.039	Ochotona_princeps
ENSMLEG00000033660	CMSS1	100	74.552	ENSODEG00000001853	-	100	74.552	Octodon_degus
ENSMLEG00000033660	CMSS1	100	69.892	ENSODEG00000009446	-	100	69.892	Octodon_degus
ENSMLEG00000033660	CMSS1	100	80.783	ENSODEG00000003558	-	100	80.783	Octodon_degus
ENSMLEG00000033660	CMSS1	100	86.022	ENSODEG00000005226	-	100	86.022	Octodon_degus
ENSMLEG00000033660	CMSS1	77	60.891	ENSONIG00000006678	cmss1	88	55.144	Oreochromis_niloticus
ENSMLEG00000033660	CMSS1	98	72.692	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSMLEG00000033660	CMSS1	100	90.805	ENSOCUG00000025366	CMSS1	95	90.805	Oryctolagus_cuniculus
ENSMLEG00000033660	CMSS1	100	53.082	ENSORLG00000020340	cmss1	100	54.082	Oryzias_latipes
ENSMLEG00000033660	CMSS1	88	54.148	ENSORLG00020012235	cmss1	99	54.077	Oryzias_latipes_hni
ENSMLEG00000033660	CMSS1	77	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSMLEG00000033660	CMSS1	100	53.793	ENSOMEG00000012555	cmss1	100	53.979	Oryzias_melastigma
ENSMLEG00000033660	CMSS1	87	91.667	ENSOGAG00000002045	CMSS1	100	91.667	Otolemur_garnettii
ENSMLEG00000033660	CMSS1	98	88.372	ENSOARG00000017899	CMSS1	89	88.372	Ovis_aries
ENSMLEG00000033660	CMSS1	100	96.552	ENSPPAG00000038515	CMSS1	95	97.287	Pan_paniscus
ENSMLEG00000033660	CMSS1	100	92.115	ENSPPRG00000016767	CMSS1	100	92.115	Panthera_pardus
ENSMLEG00000033660	CMSS1	100	91.756	ENSPTIG00000018274	CMSS1	100	91.756	Panthera_tigris_altaica
ENSMLEG00000033660	CMSS1	100	96.552	ENSPTRG00000015157	CMSS1	100	96.735	Pan_troglodytes
ENSMLEG00000033660	CMSS1	100	93.870	ENSPANG00000019980	CMSS1	99	94.574	Papio_anubis
ENSMLEG00000033660	CMSS1	94	55.882	ENSPKIG00000012609	cmss1	97	56.818	Paramormyrops_kingsleyae
ENSMLEG00000033660	CMSS1	88	73.799	ENSPSIG00000003849	CMSS1	100	73.799	Pelodiscus_sinensis
ENSMLEG00000033660	CMSS1	90	55.833	ENSPMGG00000010286	cmss1	100	57.203	Periophthalmus_magnuspinnatus
ENSMLEG00000033660	CMSS1	100	82.857	ENSPEMG00000016384	Cmss1	100	82.857	Peromyscus_maniculatus_bairdii
ENSMLEG00000033660	CMSS1	78	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSMLEG00000033660	CMSS1	100	71.591	ENSPCIG00000015656	CMSS1	100	71.591	Phascolarctos_cinereus
ENSMLEG00000033660	CMSS1	100	51.748	ENSPFOG00000016849	cmss1	100	52.098	Poecilia_formosa
ENSMLEG00000033660	CMSS1	100	51.399	ENSPLAG00000008323	cmss1	100	51.748	Poecilia_latipinna
ENSMLEG00000033660	CMSS1	100	49.836	ENSPMEG00000021020	cmss1	100	52.759	Poecilia_mexicana
ENSMLEG00000033660	CMSS1	77	62.376	ENSPREG00000007618	cmss1	69	62.376	Poecilia_reticulata
ENSMLEG00000033660	CMSS1	100	95.341	ENSPPYG00000013606	CMSS1	100	95.341	Pongo_abelii
ENSMLEG00000033660	CMSS1	100	91.039	ENSPCOG00000020035	CMSS1	100	91.039	Propithecus_coquereli
ENSMLEG00000033660	CMSS1	100	78.136	ENSPVAG00000017031	CMSS1	100	78.136	Pteropus_vampyrus
ENSMLEG00000033660	CMSS1	91	48.561	ENSPNYG00000013428	cmss1	97	49.640	Pundamilia_nyererei
ENSMLEG00000033660	CMSS1	100	47.176	ENSPNAG00000007912	cmss1	100	47.841	Pygocentrus_nattereri
ENSMLEG00000033660	CMSS1	99	81.538	ENSRNOG00000027888	Cmss1	100	81.538	Rattus_norvegicus
ENSMLEG00000033660	CMSS1	100	98.208	ENSRBIG00000037931	CMSS1	100	98.208	Rhinopithecus_bieti
ENSMLEG00000033660	CMSS1	100	98.208	ENSRROG00000042910	CMSS1	100	98.208	Rhinopithecus_roxellana
ENSMLEG00000033660	CMSS1	100	93.893	ENSSBOG00000030980	CMSS1	100	93.893	Saimiri_boliviensis_boliviensis
ENSMLEG00000033660	CMSS1	95	74.206	ENSSHAG00000009321	CMSS1	99	74.206	Sarcophilus_harrisii
ENSMLEG00000033660	CMSS1	100	52.862	ENSSFOG00015001509	cmss1	100	54.639	Scleropages_formosus
ENSMLEG00000033660	CMSS1	100	50.859	ENSSMAG00000001653	cmss1	100	51.505	Scophthalmus_maximus
ENSMLEG00000033660	CMSS1	100	51.864	ENSSDUG00000007719	cmss1	100	53.767	Seriola_dumerili
ENSMLEG00000033660	CMSS1	79	63.285	ENSSLDG00000012300	cmss1	75	58.889	Seriola_lalandi_dorsalis
ENSMLEG00000033660	CMSS1	100	74.643	ENSSARG00000003584	CMSS1	100	74.643	Sorex_araneus
ENSMLEG00000033660	CMSS1	87	69.912	ENSSPUG00000003865	CMSS1	100	69.912	Sphenodon_punctatus
ENSMLEG00000033660	CMSS1	79	63.592	ENSSPAG00000019182	cmss1	82	54.682	Stegastes_partitus
ENSMLEG00000033660	CMSS1	100	92.115	ENSSSCG00000011970	CMSS1	100	92.115	Sus_scrofa
ENSMLEG00000033660	CMSS1	88	66.376	ENSTGUG00000013635	CMSS1	100	66.376	Taeniopygia_guttata
ENSMLEG00000033660	CMSS1	100	51.579	ENSTRUG00000015265	cmss1	100	52.281	Takifugu_rubripes
ENSMLEG00000033660	CMSS1	77	55.941	ENSTNIG00000002880	cmss1	73	55.941	Tetraodon_nigroviridis
ENSMLEG00000033660	CMSS1	100	60.000	ENSTBEG00000016722	CMSS1	100	60.000	Tupaia_belangeri
ENSMLEG00000033660	CMSS1	100	87.097	ENSTTRG00000001562	CMSS1	100	87.097	Tursiops_truncatus
ENSMLEG00000033660	CMSS1	99	90.734	ENSUAMG00000024209	CMSS1	100	93.722	Ursus_americanus
ENSMLEG00000033660	CMSS1	99	90.698	ENSUMAG00000001983	CMSS1	99	90.310	Ursus_maritimus
ENSMLEG00000033660	CMSS1	100	67.742	ENSVPAG00000000263	CMSS1	100	67.742	Vicugna_pacos
ENSMLEG00000033660	CMSS1	83	92.130	ENSVVUG00000007776	-	85	92.130	Vulpes_vulpes
ENSMLEG00000033660	CMSS1	94	89.837	ENSVVUG00000021647	-	100	89.837	Vulpes_vulpes
ENSMLEG00000033660	CMSS1	100	54.804	ENSXETG00000011858	cmss1	100	54.804	Xenopus_tropicalis
ENSMLEG00000033660	CMSS1	80	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSMLEG00000033660	CMSS1	80	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus