EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000034562 (Gene tree)
Gene ID: 105530049
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 36780 bases
Position: chrKN979162.1:3442154-3478933
Accession: 105530049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000020734	RRM_5	PF13893.6	4e-06	1	1
ENSMLEP00000020724	RRM_5	PF13893.6	4.1e-06	1	1
ENSMLEP00000020724	RRM_1	PF00076.22	6.5e-14	1	1
ENSMLEP00000020734	RRM_1	PF00076.22	6.5e-14	1	1
ENSMLEP00000020734	SAP	PF02037.27	2.3e-10	1	1
ENSMLEP00000020724	SAP	PF02037.27	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000044223	SAFB2-201	3398	XM_011967378	ENSMLEP00000020724	953 (aa)	XP_011822768	A0A2K5YYT3
ENSMLET00000044233	SAFB2-202	2838	-	ENSMLEP00000020734	945 (aa)	-	A0A2K5YYU3

Gene Model

Click here to download ENSMLEG00000034562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000034562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000034562	SAFB2	98	67.208	ENSMLEG00000038637	SAFB	100	66.807

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000034562	SAFB2	100	98.741	ENSG00000130254	SAFB2	100	98.741	Homo_sapiens
ENSMLEG00000034562	SAFB2	100	86.674	ENSAMEG00000012146	SAFB2	100	86.569	Ailuropoda_melanoleuca
ENSMLEG00000034562	SAFB2	100	96.720	ENSANAG00000031936	SAFB2	100	96.720	Aotus_nancymaae
ENSMLEG00000034562	SAFB2	100	84.277	ENSBTAG00000001790	SAFB2	99	84.722	Bos_taurus
ENSMLEG00000034562	SAFB2	100	89.110	ENSCAFG00000018814	SAFB2	100	89.110	Canis_familiaris
ENSMLEG00000034562	SAFB2	100	89.110	ENSCAFG00020018939	SAFB2	100	89.110	Canis_lupus_dingo
ENSMLEG00000034562	SAFB2	100	83.857	ENSCHIG00000024547	SAFB2	100	83.857	Capra_hircus
ENSMLEG00000034562	SAFB2	93	67.579	ENSCAPG00000011771	SAFB2	100	68.137	Cavia_aperea
ENSMLEG00000034562	SAFB2	100	79.611	ENSCPOG00000011394	SAFB2	100	79.713	Cavia_porcellus
ENSMLEG00000034562	SAFB2	100	96.825	ENSCCAG00000017348	SAFB2	100	96.825	Cebus_capucinus
ENSMLEG00000034562	SAFB2	100	98.531	ENSCATG00000039497	SAFB2	100	98.531	Cercocebus_atys
ENSMLEG00000034562	SAFB2	100	99.580	ENSCSAG00000009959	SAFB2	100	99.580	Chlorocebus_sabaeus
ENSMLEG00000034562	SAFB2	74	76.695	ENSCHOG00000010684	SAFB2	99	76.836	Choloepus_hoffmanni
ENSMLEG00000034562	SAFB2	100	97.989	ENSCANG00000024675	SAFB2	100	97.989	Colobus_angolensis_palliatus
ENSMLEG00000034562	SAFB2	100	70.080	ENSCGRG00001015833	Safb2	100	69.779	Cricetulus_griseus_chok1gshd
ENSMLEG00000034562	SAFB2	100	70.080	ENSCGRG00000011131	Safb2	100	69.779	Cricetulus_griseus_crigri
ENSMLEG00000034562	SAFB2	95	76.915	ENSDORG00000016199	Safb2	100	77.133	Dipodomys_ordii
ENSMLEG00000034562	SAFB2	86	83.758	ENSEASG00005022952	SAFB2	91	83.254	Equus_asinus_asinus
ENSMLEG00000034562	SAFB2	98	83.885	ENSECAG00000018978	SAFB2	100	84.053	Equus_caballus
ENSMLEG00000034562	SAFB2	100	87.841	ENSFCAG00000011834	SAFB2	100	87.841	Felis_catus
ENSMLEG00000034562	SAFB2	93	83.892	ENSFDAG00000020009	SAFB2	93	84.202	Fukomys_damarensis
ENSMLEG00000034562	SAFB2	100	93.952	ENSGGOG00000015093	SAFB2	100	93.118	Gorilla_gorilla
ENSMLEG00000034562	SAFB2	100	86.550	ENSHGLG00000017442	SAFB2	100	86.550	Heterocephalus_glaber_female
ENSMLEG00000034562	SAFB2	98	82.947	ENSLAFG00000003836	SAFB2	99	82.086	Loxodonta_africana
ENSMLEG00000034562	SAFB2	100	99.790	ENSMFAG00000039706	SAFB2	100	99.790	Macaca_fascicularis
ENSMLEG00000034562	SAFB2	100	99.895	ENSMMUG00000017968	SAFB2	100	99.895	Macaca_mulatta
ENSMLEG00000034562	SAFB2	100	93.730	ENSMNEG00000032042	SAFB2	100	93.340	Macaca_nemestrina
ENSMLEG00000034562	SAFB2	83	75.784	ENSMAUG00000011573	Safb2	93	76.302	Mesocricetus_auratus
ENSMLEG00000034562	SAFB2	100	91.423	ENSMICG00000008711	SAFB2	100	91.423	Microcebus_murinus
ENSMLEG00000034562	SAFB2	100	69.888	ENSMOCG00000006827	Safb2	100	69.442	Microtus_ochrogaster
ENSMLEG00000034562	SAFB2	98	72.756	ENSMODG00000001178	SAFB2	100	72.228	Monodelphis_domestica
ENSMLEG00000034562	SAFB2	100	69.384	MGP_CAROLIEiJ_G0021779	Safb2	100	69.085	Mus_caroli
ENSMLEG00000034562	SAFB2	100	69.652	ENSMUSG00000042625	Safb2	100	69.453	Mus_musculus
ENSMLEG00000034562	SAFB2	100	69.100	MGP_PahariEiJ_G0020768	Safb2	100	68.800	Mus_pahari
ENSMLEG00000034562	SAFB2	100	64.331	MGP_SPRETEiJ_G0022690	Safb2	100	62.462	Mus_spretus
ENSMLEG00000034562	SAFB2	100	87.539	ENSMPUG00000006106	SAFB2	93	87.435	Mustela_putorius_furo
ENSMLEG00000034562	SAFB2	100	83.091	ENSMLUG00000001050	SAFB2	100	81.432	Myotis_lucifugus
ENSMLEG00000034562	SAFB2	100	97.374	ENSNLEG00000013514	SAFB2	100	97.374	Nomascus_leucogenys
ENSMLEG00000034562	SAFB2	93	68.904	ENSMEUG00000002456	SAFB2	100	68.568	Notamacropus_eugenii
ENSMLEG00000034562	SAFB2	98	75.319	ENSOPRG00000011523	-	100	75.600	Ochotona_princeps
ENSMLEG00000034562	SAFB2	100	82.083	ENSODEG00000014751	SAFB2	100	81.979	Octodon_degus
ENSMLEG00000034562	SAFB2	100	89.854	ENSOGAG00000006855	SAFB2	100	89.040	Otolemur_garnettii
ENSMLEG00000034562	SAFB2	97	74.896	ENSOARG00000007982	SAFB2	67	85.137	Ovis_aries
ENSMLEG00000034562	SAFB2	100	98.741	ENSPPAG00000043392	SAFB2	100	98.741	Pan_paniscus
ENSMLEG00000034562	SAFB2	100	87.945	ENSPPRG00000011310	SAFB2	100	87.945	Panthera_pardus
ENSMLEG00000034562	SAFB2	82	88.406	ENSPTIG00000015120	SAFB2	91	88.406	Panthera_tigris_altaica
ENSMLEG00000034562	SAFB2	100	92.655	ENSPTRG00000010334	SAFB2	100	92.655	Pan_troglodytes
ENSMLEG00000034562	SAFB2	100	99.895	ENSPANG00000007004	SAFB2	100	99.895	Papio_anubis
ENSMLEG00000034562	SAFB2	100	67.797	ENSPEMG00000016015	Safb2	100	67.498	Peromyscus_maniculatus_bairdii
ENSMLEG00000034562	SAFB2	65	75.327	ENSPCIG00000009518	-	99	78.821	Phascolarctos_cinereus
ENSMLEG00000034562	SAFB2	100	98.636	ENSPPYG00000009427	SAFB2	100	98.636	Pongo_abelii
ENSMLEG00000034562	SAFB2	100	80.312	ENSPCAG00000006352	SAFB2	99	81.866	Procavia_capensis
ENSMLEG00000034562	SAFB2	100	87.631	ENSPCOG00000023260	SAFB2	100	85.879	Propithecus_coquereli
ENSMLEG00000034562	SAFB2	58	86.957	ENSPVAG00000004902	-	71	86.957	Pteropus_vampyrus
ENSMLEG00000034562	SAFB2	82	69.417	ENSRNOG00000049511	AABR07066522.1	100	67.476	Rattus_norvegicus
ENSMLEG00000034562	SAFB2	83	99.650	ENSRBIG00000033446	SAFB2	100	99.650	Rhinopithecus_bieti
ENSMLEG00000034562	SAFB2	100	99.475	ENSRROG00000006606	SAFB2	100	99.475	Rhinopithecus_roxellana
ENSMLEG00000034562	SAFB2	100	96.296	ENSSBOG00000032315	SAFB2	100	96.296	Saimiri_boliviensis_boliviensis
ENSMLEG00000034562	SAFB2	98	72.145	ENSSHAG00000012703	SAFB2	100	70.981	Sarcophilus_harrisii
ENSMLEG00000034562	SAFB2	81	72.036	ENSSARG00000000649	SAFB2	100	72.036	Sorex_araneus
ENSMLEG00000034562	SAFB2	100	88.901	ENSSSCG00000013523	SAFB2	100	88.901	Sus_scrofa
ENSMLEG00000034562	SAFB2	77	79.696	ENSTBEG00000012709	SAFB2	85	79.696	Tupaia_belangeri
ENSMLEG00000034562	SAFB2	93	80.830	ENSTTRG00000013585	SAFB2	93	80.605	Tursiops_truncatus
ENSMLEG00000034562	SAFB2	98	88.687	ENSUAMG00000024695	SAFB2	97	88.687	Ursus_americanus
ENSMLEG00000034562	SAFB2	86	86.644	ENSUMAG00000009585	SAFB2	90	86.644	Ursus_maritimus
ENSMLEG00000034562	SAFB2	74	90.625	ENSVPAG00000012041	SAFB2	89	90.625	Vicugna_pacos
ENSMLEG00000034562	SAFB2	100	89.005	ENSVVUG00000013695	SAFB2	100	89.005	Vulpes_vulpes