EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000034688 (Gene tree)
Gene ID: 105539410
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 27116 bases
Position: chrKN974152.1:797510-824625
Accession: 105539410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000020952	zf-C2H2	PF00096.26	5.1e-37	1	6
ENSMLEP00000020952	zf-C2H2	PF00096.26	5.1e-37	2	6
ENSMLEP00000020952	zf-C2H2	PF00096.26	5.1e-37	3	6
ENSMLEP00000020952	zf-C2H2	PF00096.26	5.1e-37	4	6
ENSMLEP00000020952	zf-C2H2	PF00096.26	5.1e-37	5	6
ENSMLEP00000020952	zf-C2H2	PF00096.26	5.1e-37	6	6
ENSMLEP00000020947	zf-C2H2	PF00096.26	1.3e-36	1	6
ENSMLEP00000020947	zf-C2H2	PF00096.26	1.3e-36	2	6
ENSMLEP00000020947	zf-C2H2	PF00096.26	1.3e-36	3	6
ENSMLEP00000020947	zf-C2H2	PF00096.26	1.3e-36	4	6
ENSMLEP00000020947	zf-C2H2	PF00096.26	1.3e-36	5	6
ENSMLEP00000020947	zf-C2H2	PF00096.26	1.3e-36	6	6
ENSMLEP00000020952	zf-met	PF12874.7	0.00016	1	1
ENSMLEP00000020947	zf-met	PF12874.7	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000044451	ZNF550-203	1131	-	ENSMLEP00000020952	376 (aa)	-	A0A2K5YZF7
ENSMLET00000044441	ZNF550-201	375	-	ENSMLEP00000020942	124 (aa)	-	A0A2K5YZE7
ENSMLET00000044447	ZNF550-202	1944	XM_011979679	ENSMLEP00000020947	417 (aa)	XP_011835069	A0A2K5YZF2

Gene Model

Click here to download ENSMLEG00000034688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000034688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000034688	ZNF550	99	56.637	ENSMLEG00000036926	ZNF816	97	56.637
ENSMLEG00000034688	ZNF550	99	59.740	ENSMLEG00000035033	ZNF267	99	59.740
ENSMLEG00000034688	ZNF550	99	62.115	ENSMLEG00000030585	ZNF582	93	62.115
ENSMLEG00000034688	ZNF550	99	55.702	ENSMLEG00000033428	ZNF226	98	55.702
ENSMLEG00000034688	ZNF550	99	56.195	ENSMLEG00000033227	ZNF468	99	56.195
ENSMLEG00000034688	ZNF550	99	55.603	ENSMLEG00000041213	ZNF28	99	55.603
ENSMLEG00000034688	ZNF550	99	53.472	ENSMLEG00000034449	ZNF791	99	53.982
ENSMLEG00000034688	ZNF550	99	55.429	ENSMLEG00000021950	ZFP1	98	55.429
ENSMLEG00000034688	ZNF550	98	57.078	ENSMLEG00000042823	ZNF2	95	57.078
ENSMLEG00000034688	ZNF550	99	56.828	ENSMLEG00000033143	ZNF112	99	56.828
ENSMLEG00000034688	ZNF550	95	55.288	ENSMLEG00000035602	ZNF701	99	55.288
ENSMLEG00000034688	ZNF550	89	60.619	ENSMLEG00000007035	-	98	60.619
ENSMLEG00000034688	ZNF550	100	40.436	ENSMLEG00000029321	ZNF205	74	39.535
ENSMLEG00000034688	ZNF550	99	54.911	ENSMLEG00000038043	ZNF808	96	54.911
ENSMLEG00000034688	ZNF550	81	55.652	ENSMLEG00000038583	-	90	55.652
ENSMLEG00000034688	ZNF550	99	51.190	ENSMLEG00000040922	ZNF317	89	51.190
ENSMLEG00000034688	ZNF550	99	61.674	ENSMLEG00000040920	ZNF850	99	61.674
ENSMLEG00000034688	ZNF550	99	55.752	ENSMLEG00000044333	ZNF845	99	55.752
ENSMLEG00000034688	ZNF550	99	49.115	ENSMLEG00000038695	ZNF225	97	49.115
ENSMLEG00000034688	ZNF550	99	59.204	ENSMLEG00000039955	ZNF454	98	59.204
ENSMLEG00000034688	ZNF550	99	57.558	ENSMLEG00000034727	ZNF836	97	57.558
ENSMLEG00000034688	ZNF550	99	54.626	ENSMLEG00000034346	ZNF235	99	54.626
ENSMLEG00000034688	ZNF550	99	56.995	ENSMLEG00000032862	ZNF670	98	56.995
ENSMLEG00000034688	ZNF550	60	54.745	ENSMLEG00000037240	ZNF768	53	51.542
ENSMLEG00000034688	ZNF550	99	60.500	ENSMLEG00000033785	ZNF829	92	45.966
ENSMLEG00000034688	ZNF550	61	61.951	ENSMLEG00000032640	-	86	61.951
ENSMLEG00000034688	ZNF550	99	50.442	ENSMLEG00000031311	ZNF814	99	51.515
ENSMLEG00000034688	ZNF550	76	53.540	ENSMLEG00000011375	-	83	53.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000034688	ZNF550	100	95.538	ENSG00000251369	ZNF550	100	95.538	Homo_sapiens
ENSMLEG00000034688	ZNF550	100	99.760	ENSCATG00000020915	ZNF550	100	99.760	Cercocebus_atys
ENSMLEG00000034688	ZNF550	100	63.446	ENSCLAG00000000250	ZNF550	95	68.449	Chinchilla_lanigera
ENSMLEG00000034688	ZNF550	98	98.775	ENSCSAG00000001629	ZNF550	100	98.775	Chlorocebus_sabaeus
ENSMLEG00000034688	ZNF550	100	97.606	ENSCANG00000033735	ZNF550	100	97.606	Colobus_angolensis_palliatus
ENSMLEG00000034688	ZNF550	89	72.141	ENSDNOG00000033330	-	99	71.989	Dasypus_novemcinctus
ENSMLEG00000034688	ZNF550	99	68.504	ENSFCAG00000034766	ZNF550	99	68.504	Felis_catus
ENSMLEG00000034688	ZNF550	100	95.013	ENSGGOG00000014068	ZNF550	100	95.013	Gorilla_gorilla
ENSMLEG00000034688	ZNF550	100	71.360	ENSHGLG00000018048	ZNF550	100	71.360	Heterocephalus_glaber_female
ENSMLEG00000034688	ZNF550	100	98.801	ENSMFAG00000036005	ZNF550	100	98.801	Macaca_fascicularis
ENSMLEG00000034688	ZNF550	100	98.404	ENSMMUG00000006122	ZNF550	100	98.404	Macaca_mulatta
ENSMLEG00000034688	ZNF550	100	98.801	ENSMNEG00000041366	ZNF550	100	98.801	Macaca_nemestrina
ENSMLEG00000034688	ZNF550	100	82.984	ENSMICG00000007561	ZNF550	100	82.984	Microcebus_murinus
ENSMLEG00000034688	ZNF550	99	68.241	ENSPPRG00000013475	ZNF550	99	68.241	Panthera_pardus
ENSMLEG00000034688	ZNF550	100	67.219	ENSPTIG00000018007	ZNF550	80	67.066	Panthera_tigris_altaica
ENSMLEG00000034688	ZNF550	100	95.013	ENSPTRG00000011560	ZNF550	100	95.013	Pan_troglodytes
ENSMLEG00000034688	ZNF550	100	99.468	ENSPANG00000030602	ZNF550	100	99.468	Papio_anubis
ENSMLEG00000034688	ZNF550	100	85.106	ENSPCOG00000018751	ZNF550	100	85.106	Propithecus_coquereli
ENSMLEG00000034688	ZNF550	99	71.635	ENSPVAG00000000908	ZNF550	100	71.635	Pteropus_vampyrus
ENSMLEG00000034688	ZNF550	100	98.801	ENSRBIG00000017275	ZNF550	100	98.801	Rhinopithecus_bieti
ENSMLEG00000034688	ZNF550	100	98.801	ENSRROG00000040063	ZNF550	100	98.801	Rhinopithecus_roxellana
ENSMLEG00000034688	ZNF550	98	78.261	ENSTTRG00000000293	ZNF550	100	78.261	Tursiops_truncatus