EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000036120 (Gene tree)
Gene ID: 105535701
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 131549 bases
Position: chrKN973540.1:3260462-3392010
Accession: 105535701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000024005	Upf2	PF04050.14	1e-32	1	1
ENSMLEP00000024024	Upf2	PF04050.14	1.2e-32	1	1
ENSMLEP00000024024	MIF4G	PF02854.19	1.5e-80	1	3
ENSMLEP00000024024	MIF4G	PF02854.19	1.5e-80	2	3
ENSMLEP00000024024	MIF4G	PF02854.19	1.5e-80	3	3
ENSMLEP00000024005	MIF4G	PF02854.19	6e-62	1	3
ENSMLEP00000024005	MIF4G	PF02854.19	6e-62	2	3
ENSMLEP00000024005	MIF4G	PF02854.19	6e-62	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000047526	UPF2-201	3615	XM_011974896	ENSMLEP00000024005	1204 (aa)	XP_011830286	A0A2K5Z8D6
ENSMLET00000047545	UPF2-202	3789	-	ENSMLEP00000024024	1262 (aa)	-	A0A2K5Z878

Gene Model

Click here to download ENSMLEG00000036120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000036120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000036120	UPF2	100	100.000	ENSG00000151461	UPF2	99	96.560	Homo_sapiens
ENSMLEG00000036120	UPF2	100	76.299	ENSAPOG00000015837	UPF2	100	77.087	Acanthochromis_polyacanthus
ENSMLEG00000036120	UPF2	100	99.517	ENSAMEG00000004586	UPF2	95	99.517	Ailuropoda_melanoleuca
ENSMLEG00000036120	UPF2	100	80.484	ENSACIG00000018078	UPF2	100	80.499	Amphilophus_citrinellus
ENSMLEG00000036120	UPF2	100	80.172	ENSAOCG00000016766	UPF2	100	79.843	Amphiprion_ocellaris
ENSMLEG00000036120	UPF2	100	80.250	ENSAPEG00000019084	UPF2	100	79.921	Amphiprion_percula
ENSMLEG00000036120	UPF2	100	80.389	ENSATEG00000021677	UPF2	99	78.692	Anabas_testudineus
ENSMLEG00000036120	UPF2	100	87.440	ENSAPLG00000010287	UPF2	99	85.940	Anas_platyrhynchos
ENSMLEG00000036120	UPF2	100	89.528	ENSACAG00000009259	UPF2	95	95.181	Anolis_carolinensis
ENSMLEG00000036120	UPF2	99	99.272	ENSANAG00000028451	UPF2	94	99.031	Aotus_nancymaae
ENSMLEG00000036120	UPF2	100	78.923	ENSACLG00000012696	UPF2	99	80.733	Astatotilapia_calliptera
ENSMLEG00000036120	UPF2	100	80.829	ENSAMXG00000013700	UPF2	99	80.420	Astyanax_mexicanus
ENSMLEG00000036120	UPF2	100	99.275	ENSBTAG00000000288	UPF2	95	99.275	Bos_taurus
ENSMLEG00000036120	UPF2	100	99.517	ENSCJAG00000020685	UPF2	99	97.385	Callithrix_jacchus
ENSMLEG00000036120	UPF2	100	99.275	ENSCAFG00000004839	UPF2	95	99.275	Canis_familiaris
ENSMLEG00000036120	UPF2	100	96.355	ENSCAFG00020005882	UPF2	100	96.355	Canis_lupus_dingo
ENSMLEG00000036120	UPF2	100	99.275	ENSCHIG00000020359	UPF2	95	99.275	Capra_hircus
ENSMLEG00000036120	UPF2	100	99.275	ENSTSYG00000000935	UPF2	100	95.880	Carlito_syrichta
ENSMLEG00000036120	UPF2	92	84.609	ENSCAPG00000016658	UPF2	100	83.063	Cavia_aperea
ENSMLEG00000036120	UPF2	99	98.301	ENSCPOG00000008809	UPF2	95	98.063	Cavia_porcellus
ENSMLEG00000036120	UPF2	100	94.312	ENSCCAG00000035991	UPF2	100	94.312	Cebus_capucinus
ENSMLEG00000036120	UPF2	100	100.000	ENSCATG00000032679	UPF2	100	100.000	Cercocebus_atys
ENSMLEG00000036120	UPF2	100	98.309	ENSCLAG00000011434	UPF2	95	98.309	Chinchilla_lanigera
ENSMLEG00000036120	UPF2	100	100.000	ENSCSAG00000013372	UPF2	99	96.873	Chlorocebus_sabaeus
ENSMLEG00000036120	UPF2	87	99.554	ENSCHOG00000000422	UPF2	89	99.554	Choloepus_hoffmanni
ENSMLEG00000036120	UPF2	99	97.330	ENSCPBG00000027823	UPF2	95	97.094	Chrysemys_picta_bellii
ENSMLEG00000036120	UPF2	79	48.814	ENSCSAVG00000007772	-	79	50.446	Ciona_savignyi
ENSMLEG00000036120	UPF2	99	99.874	ENSCANG00000040396	UPF2	100	96.754	Colobus_angolensis_palliatus
ENSMLEG00000036120	UPF2	100	99.034	ENSCGRG00001019347	Upf2	95	99.034	Cricetulus_griseus_chok1gshd
ENSMLEG00000036120	UPF2	100	99.034	ENSCGRG00000017993	Upf2	95	99.034	Cricetulus_griseus_crigri
ENSMLEG00000036120	UPF2	91	77.461	ENSCSEG00000003520	UPF2	99	71.125	Cynoglossus_semilaevis
ENSMLEG00000036120	UPF2	99	80.110	ENSCVAG00000006167	UPF2	100	79.969	Cyprinodon_variegatus
ENSMLEG00000036120	UPF2	100	99.034	ENSDNOG00000018160	UPF2	95	99.034	Dasypus_novemcinctus
ENSMLEG00000036120	UPF2	100	97.585	ENSDORG00000002478	Upf2	99	94.053	Dipodomys_ordii
ENSMLEG00000036120	UPF2	89	36.349	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSMLEG00000036120	UPF2	71	100.000	ENSETEG00000011583	-	67	100.000	Echinops_telfairi
ENSMLEG00000036120	UPF2	73	68.256	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSMLEG00000036120	UPF2	100	100.000	ENSEASG00005019274	UPF2	99	96.853	Equus_asinus_asinus
ENSMLEG00000036120	UPF2	100	100.000	ENSECAG00000017022	UPF2	95	100.000	Equus_caballus
ENSMLEG00000036120	UPF2	86	95.208	ENSEEUG00000007819	UPF2	82	95.208	Erinaceus_europaeus
ENSMLEG00000036120	UPF2	99	83.614	ENSELUG00000012014	UPF2	99	79.128	Esox_lucius
ENSMLEG00000036120	UPF2	100	99.448	ENSFCAG00000005785	UPF2	95	99.275	Felis_catus
ENSMLEG00000036120	UPF2	100	96.377	ENSFALG00000001889	UPF2	93	96.145	Ficedula_albicollis
ENSMLEG00000036120	UPF2	100	97.101	ENSFDAG00000014348	UPF2	99	93.349	Fukomys_damarensis
ENSMLEG00000036120	UPF2	99	80.315	ENSFHEG00000009826	UPF2	99	80.252	Fundulus_heteroclitus
ENSMLEG00000036120	UPF2	90	84.172	ENSGMOG00000005557	UPF2	100	78.555	Gadus_morhua
ENSMLEG00000036120	UPF2	100	96.618	ENSGALG00000033772	UPF2	95	96.386	Gallus_gallus
ENSMLEG00000036120	UPF2	100	77.440	ENSGAFG00000020867	UPF2	99	79.563	Gambusia_affinis
ENSMLEG00000036120	UPF2	90	82.053	ENSGACG00000001080	UPF2	100	79.690	Gasterosteus_aculeatus
ENSMLEG00000036120	UPF2	100	96.860	ENSGAGG00000002700	UPF2	95	96.627	Gopherus_agassizii
ENSMLEG00000036120	UPF2	100	100.000	ENSGGOG00000001479	UPF2	100	99.683	Gorilla_gorilla
ENSMLEG00000036120	UPF2	100	78.923	ENSHBUG00000004249	UPF2	100	80.733	Haplochromis_burtoni
ENSMLEG00000036120	UPF2	100	98.309	ENSHGLG00000015176	-	95	98.309	Heterocephalus_glaber_female
ENSMLEG00000036120	UPF2	99	89.104	ENSHGLG00000003822	-	94	87.923	Heterocephalus_glaber_female
ENSMLEG00000036120	UPF2	99	97.573	ENSHGLG00100010036	UPF2	95	97.579	Heterocephalus_glaber_male
ENSMLEG00000036120	UPF2	100	81.384	ENSHCOG00000004025	UPF2	99	78.632	Hippocampus_comes
ENSMLEG00000036120	UPF2	100	82.100	ENSIPUG00000015524	UPF2	95	81.556	Ictalurus_punctatus
ENSMLEG00000036120	UPF2	100	98.792	ENSSTOG00000013075	UPF2	95	98.792	Ictidomys_tridecemlineatus
ENSMLEG00000036120	UPF2	100	95.652	ENSJJAG00000004913	Upf2	99	92.958	Jaculus_jaculus
ENSMLEG00000036120	UPF2	99	79.937	ENSKMAG00000001071	UPF2	99	80.298	Kryptolebias_marmoratus
ENSMLEG00000036120	UPF2	80	82.237	ENSLBEG00000000728	-	93	82.336	Labrus_bergylta
ENSMLEG00000036120	UPF2	100	80.560	ENSLBEG00000016394	-	100	79.701	Labrus_bergylta
ENSMLEG00000036120	UPF2	99	82.057	ENSLACG00000015945	UPF2	100	79.232	Latimeria_chalumnae
ENSMLEG00000036120	UPF2	91	86.293	ENSLOCG00000015698	UPF2	99	83.924	Lepisosteus_oculatus
ENSMLEG00000036120	UPF2	100	100.000	ENSMFAG00000043865	UPF2	100	97.940	Macaca_fascicularis
ENSMLEG00000036120	UPF2	100	100.000	ENSMMUG00000008241	UPF2	99	96.873	Macaca_mulatta
ENSMLEG00000036120	UPF2	81	99.610	ENSMNEG00000008062	UPF2	100	99.610	Macaca_nemestrina
ENSMLEG00000036120	UPF2	100	79.922	ENSMAMG00000018276	UPF2	99	78.251	Mastacembelus_armatus
ENSMLEG00000036120	UPF2	100	78.923	ENSMZEG00005021595	UPF2	99	80.733	Maylandia_zebra
ENSMLEG00000036120	UPF2	99	96.368	ENSMGAG00000004573	UPF2	95	96.135	Meleagris_gallopavo
ENSMLEG00000036120	UPF2	100	99.034	ENSMAUG00000016512	Upf2	95	99.034	Mesocricetus_auratus
ENSMLEG00000036120	UPF2	99	97.851	ENSMICG00000001716	UPF2	100	93.502	Microcebus_murinus
ENSMLEG00000036120	UPF2	100	97.826	ENSMOCG00000008263	Upf2	95	97.826	Microtus_ochrogaster
ENSMLEG00000036120	UPF2	99	80.928	ENSMMOG00000006528	UPF2	100	79.134	Mola_mola
ENSMLEG00000036120	UPF2	100	93.071	ENSMODG00000016794	UPF2	99	92.338	Monodelphis_domestica
ENSMLEG00000036120	UPF2	100	79.844	ENSMALG00000002663	UPF2	100	80.189	Monopterus_albus
ENSMLEG00000036120	UPF2	100	97.585	MGP_CAROLIEiJ_G0023157	Upf2	99	94.700	Mus_caroli
ENSMLEG00000036120	UPF2	100	98.068	ENSMUSG00000043241	Upf2	99	94.366	Mus_musculus
ENSMLEG00000036120	UPF2	100	97.585	MGP_PahariEiJ_G0019217	Upf2	99	94.053	Mus_pahari
ENSMLEG00000036120	UPF2	100	98.068	MGP_SPRETEiJ_G0024075	Upf2	99	94.601	Mus_spretus
ENSMLEG00000036120	UPF2	100	100.000	ENSMPUG00000001064	UPF2	95	100.000	Mustela_putorius_furo
ENSMLEG00000036120	UPF2	99	99.272	ENSMLUG00000000228	UPF2	95	99.272	Myotis_lucifugus
ENSMLEG00000036120	UPF2	100	78.923	ENSNBRG00000013629	UPF2	99	80.733	Neolamprologus_brichardi
ENSMLEG00000036120	UPF2	100	99.758	ENSNLEG00000012058	UPF2	100	97.623	Nomascus_leucogenys
ENSMLEG00000036120	UPF2	61	97.927	ENSMEUG00000002180	-	59	97.927	Notamacropus_eugenii
ENSMLEG00000036120	UPF2	76	100.000	ENSOPRG00000006801	-	78	100.000	Ochotona_princeps
ENSMLEG00000036120	UPF2	100	97.343	ENSODEG00000001290	UPF2	95	97.108	Octodon_degus
ENSMLEG00000036120	UPF2	100	79.001	ENSONIG00000017991	UPF2	99	80.811	Oreochromis_niloticus
ENSMLEG00000036120	UPF2	99	98.786	ENSOCUG00000006230	UPF2	95	98.786	Oryctolagus_cuniculus
ENSMLEG00000036120	UPF2	100	79.517	ENSORLG00000017189	UPF2	99	80.328	Oryzias_latipes
ENSMLEG00000036120	UPF2	100	79.517	ENSORLG00020005969	UPF2	99	80.328	Oryzias_latipes_hni
ENSMLEG00000036120	UPF2	100	79.517	ENSORLG00015005713	UPF2	99	80.328	Oryzias_latipes_hsok
ENSMLEG00000036120	UPF2	100	76.228	ENSOMEG00000023420	UPF2	98	77.049	Oryzias_melastigma
ENSMLEG00000036120	UPF2	100	99.275	ENSOGAG00000005796	UPF2	99	95.543	Otolemur_garnettii
ENSMLEG00000036120	UPF2	100	98.798	ENSOARG00000014587	UPF2	95	98.798	Ovis_aries
ENSMLEG00000036120	UPF2	100	98.970	ENSPPAG00000037953	UPF2	100	98.970	Pan_paniscus
ENSMLEG00000036120	UPF2	100	99.275	ENSPPRG00000000690	UPF2	95	99.275	Panthera_pardus
ENSMLEG00000036120	UPF2	100	99.275	ENSPTIG00000008867	UPF2	95	99.275	Panthera_tigris_altaica
ENSMLEG00000036120	UPF2	100	100.000	ENSPTRG00000002291	UPF2	100	99.683	Pan_troglodytes
ENSMLEG00000036120	UPF2	100	100.000	ENSPANG00000023399	UPF2	100	99.921	Papio_anubis
ENSMLEG00000036120	UPF2	100	78.750	ENSPKIG00000025502	UPF2	99	80.109	Paramormyrops_kingsleyae
ENSMLEG00000036120	UPF2	63	91.512	ENSPSIG00000015158	UPF2	95	91.512	Pelodiscus_sinensis
ENSMLEG00000036120	UPF2	100	77.551	ENSPMGG00000005259	UPF2	100	73.705	Periophthalmus_magnuspinnatus
ENSMLEG00000036120	UPF2	93	94.186	ENSPEMG00000015731	Upf2	99	94.186	Peromyscus_maniculatus_bairdii
ENSMLEG00000036120	UPF2	100	97.343	ENSPCIG00000006656	UPF2	95	97.108	Phascolarctos_cinereus
ENSMLEG00000036120	UPF2	100	77.752	ENSPFOG00000017118	UPF2	99	79.875	Poecilia_formosa
ENSMLEG00000036120	UPF2	100	77.752	ENSPLAG00000005094	UPF2	99	79.875	Poecilia_latipinna
ENSMLEG00000036120	UPF2	100	77.752	ENSPMEG00000017009	UPF2	99	79.875	Poecilia_mexicana
ENSMLEG00000036120	UPF2	100	77.543	ENSPREG00000021880	UPF2	100	78.800	Poecilia_reticulata
ENSMLEG00000036120	UPF2	64	100.000	ENSPPYG00000002089	-	99	95.255	Pongo_abelii
ENSMLEG00000036120	UPF2	95	98.068	ENSPCAG00000000684	UPF2	91	97.831	Procavia_capensis
ENSMLEG00000036120	UPF2	99	97.851	ENSPCOG00000021656	UPF2	100	96.434	Propithecus_coquereli
ENSMLEG00000036120	UPF2	100	98.792	ENSPVAG00000017286	UPF2	95	98.554	Pteropus_vampyrus
ENSMLEG00000036120	UPF2	100	76.503	ENSPNYG00000017096	UPF2	100	78.315	Pundamilia_nyererei
ENSMLEG00000036120	UPF2	100	80.938	ENSPNAG00000009357	UPF2	99	80.217	Pygocentrus_nattereri
ENSMLEG00000036120	UPF2	99	91.551	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSMLEG00000036120	UPF2	100	98.811	ENSRBIG00000037780	UPF2	100	98.811	Rhinopithecus_bieti
ENSMLEG00000036120	UPF2	100	99.874	ENSRROG00000043547	UPF2	100	99.842	Rhinopithecus_roxellana
ENSMLEG00000036120	UPF2	100	99.517	ENSSBOG00000020012	UPF2	99	96.910	Saimiri_boliviensis_boliviensis
ENSMLEG00000036120	UPF2	100	79.641	ENSSFOG00015023788	upf2	100	78.462	Scleropages_formosus
ENSMLEG00000036120	UPF2	89	83.033	ENSSMAG00000007637	UPF2	100	77.829	Scophthalmus_maximus
ENSMLEG00000036120	UPF2	100	79.685	ENSSDUG00000017244	UPF2	100	79.921	Seriola_dumerili
ENSMLEG00000036120	UPF2	100	79.403	ENSSLDG00000016866	UPF2	100	74.257	Seriola_lalandi_dorsalis
ENSMLEG00000036120	UPF2	100	97.826	ENSSARG00000008615	UPF2	95	97.590	Sorex_araneus
ENSMLEG00000036120	UPF2	99	95.157	ENSSPUG00000014544	UPF2	93	94.928	Sphenodon_punctatus
ENSMLEG00000036120	UPF2	67	99.758	ENSSSCG00000011117	-	99	94.178	Sus_scrofa
ENSMLEG00000036120	UPF2	99	96.350	ENSTGUG00000002163	-	95	96.117	Taeniopygia_guttata
ENSMLEG00000036120	UPF2	100	79.657	ENSTRUG00000007519	UPF2	99	80.109	Takifugu_rubripes
ENSMLEG00000036120	UPF2	100	78.395	ENSTNIG00000004453	UPF2	99	78.207	Tetraodon_nigroviridis
ENSMLEG00000036120	UPF2	93	96.839	ENSTBEG00000012679	UPF2	88	96.839	Tupaia_belangeri
ENSMLEG00000036120	UPF2	100	99.517	ENSTTRG00000016388	UPF2	95	99.517	Tursiops_truncatus
ENSMLEG00000036120	UPF2	94	100.000	ENSUAMG00000023560	UPF2	100	97.639	Ursus_americanus
ENSMLEG00000036120	UPF2	100	99.758	ENSUMAG00000012953	UPF2	95	94.762	Ursus_maritimus
ENSMLEG00000036120	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMLEG00000036120	UPF2	100	99.275	ENSVVUG00000006166	UPF2	95	99.275	Vulpes_vulpes
ENSMLEG00000036120	UPF2	100	84.964	ENSXETG00000033103	UPF2	91	88.908	Xenopus_tropicalis
ENSMLEG00000036120	UPF2	92	82.097	ENSXCOG00000011604	UPF2	100	79.563	Xiphophorus_couchianus
ENSMLEG00000036120	UPF2	92	82.408	ENSXMAG00000017209	UPF2	99	79.563	Xiphophorus_maculatus