EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000036301 (Gene tree)
Gene ID: 105541832
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 9451 bases
Position: chrKN974595.1:1962053-1971503
Accession: 105541832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000024284	APOBEC_N	PF08210.11	5.4e-28	1	1
ENSMLEP00000024284	APOBEC_C	PF05240.14	1.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000047807	APOBEC1-201	891	XM_011983073	ENSMLEP00000024284	236 (aa)	XP_011838463	A0A2K5Z8Y4

Gene Model

Click here to download ENSMLEG00000036301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000036301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000036301	APOBEC1	57	41.558	ENSMLEG00000024444	APOBEC3G	54	41.558
ENSMLEG00000036301	APOBEC1	55	30.303	ENSMLEG00000033417	APOBEC3H	66	30.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000036301	APOBEC1	100	94.068	ENSG00000111701	APOBEC1	100	94.068	Homo_sapiens
ENSMLEG00000036301	APOBEC1	98	80.952	ENSAMEG00000007098	APOBEC1	98	80.952	Ailuropoda_melanoleuca
ENSMLEG00000036301	APOBEC1	72	39.181	ENSACAG00000028578	-	93	39.181	Anolis_carolinensis
ENSMLEG00000036301	APOBEC1	100	90.678	ENSANAG00000027743	APOBEC1	95	90.678	Aotus_nancymaae
ENSMLEG00000036301	APOBEC1	100	74.153	ENSBTAG00000014683	APOBEC1	100	74.153	Bos_taurus
ENSMLEG00000036301	APOBEC1	94	89.593	ENSCJAG00000005398	APOBEC1	100	89.593	Callithrix_jacchus
ENSMLEG00000036301	APOBEC1	100	80.085	ENSCAFG00000013901	APOBEC1	100	80.085	Canis_familiaris
ENSMLEG00000036301	APOBEC1	96	79.646	ENSCAFG00020003511	APOBEC1	95	79.646	Canis_lupus_dingo
ENSMLEG00000036301	APOBEC1	98	75.325	ENSCHIG00000011898	APOBEC1	96	75.325	Capra_hircus
ENSMLEG00000036301	APOBEC1	60	83.688	ENSTSYG00000029141	APOBEC1	100	83.688	Carlito_syrichta
ENSMLEG00000036301	APOBEC1	91	70.093	ENSCAPG00000015882	-	99	70.093	Cavia_aperea
ENSMLEG00000036301	APOBEC1	99	68.511	ENSCPOG00000033068	APOBEC1	99	68.511	Cavia_porcellus
ENSMLEG00000036301	APOBEC1	100	92.797	ENSCCAG00000022258	APOBEC1	100	92.797	Cebus_capucinus
ENSMLEG00000036301	APOBEC1	100	100.000	ENSCATG00000021613	APOBEC1	95	100.000	Cercocebus_atys
ENSMLEG00000036301	APOBEC1	97	71.179	ENSCLAG00000014645	APOBEC1	99	71.179	Chinchilla_lanigera
ENSMLEG00000036301	APOBEC1	81	97.382	ENSCSAG00000009817	APOBEC1	100	97.382	Chlorocebus_sabaeus
ENSMLEG00000036301	APOBEC1	79	47.340	ENSCPBG00000014328	-	82	47.340	Chrysemys_picta_bellii
ENSMLEG00000036301	APOBEC1	88	38.967	ENSCPBG00000014327	-	81	38.967	Chrysemys_picta_bellii
ENSMLEG00000036301	APOBEC1	94	42.222	ENSCPBG00000014331	-	90	42.222	Chrysemys_picta_bellii
ENSMLEG00000036301	APOBEC1	78	46.524	ENSCPBG00000014335	-	76	46.524	Chrysemys_picta_bellii
ENSMLEG00000036301	APOBEC1	77	45.455	ENSCPBG00000017398	-	82	45.455	Chrysemys_picta_bellii
ENSMLEG00000036301	APOBEC1	83	50.000	ENSCPBG00000014329	-	54	50.000	Chrysemys_picta_bellii
ENSMLEG00000036301	APOBEC1	97	97.826	ENSCANG00000038359	APOBEC1	100	97.826	Colobus_angolensis_palliatus
ENSMLEG00000036301	APOBEC1	97	71.179	ENSCGRG00001011130	Apobec1	100	71.179	Cricetulus_griseus_chok1gshd
ENSMLEG00000036301	APOBEC1	97	71.179	ENSCGRG00000008644	Apobec1	100	71.179	Cricetulus_griseus_crigri
ENSMLEG00000036301	APOBEC1	100	80.932	ENSDNOG00000010926	APOBEC1	100	80.932	Dasypus_novemcinctus
ENSMLEG00000036301	APOBEC1	90	66.355	ENSDORG00000023717	Apobec1	100	66.355	Dipodomys_ordii
ENSMLEG00000036301	APOBEC1	99	79.149	ENSETEG00000004867	APOBEC1	99	79.149	Echinops_telfairi
ENSMLEG00000036301	APOBEC1	98	83.117	ENSEASG00005015951	APOBEC1	97	83.117	Equus_asinus_asinus
ENSMLEG00000036301	APOBEC1	81	83.770	ENSECAG00000017163	APOBEC1	100	83.770	Equus_caballus
ENSMLEG00000036301	APOBEC1	86	53.922	ENSEEUG00000007530	-	97	53.922	Erinaceus_europaeus
ENSMLEG00000036301	APOBEC1	93	65.611	ENSEEUG00000009112	-	98	65.611	Erinaceus_europaeus
ENSMLEG00000036301	APOBEC1	100	82.627	ENSFCAG00000009350	APOBEC1	100	82.627	Felis_catus
ENSMLEG00000036301	APOBEC1	60	47.183	ENSFALG00000007257	-	70	47.183	Ficedula_albicollis
ENSMLEG00000036301	APOBEC1	88	61.353	ENSFDAG00000018470	APOBEC1	99	61.353	Fukomys_damarensis
ENSMLEG00000036301	APOBEC1	92	46.119	ENSGAGG00000011837	-	88	52.500	Gopherus_agassizii
ENSMLEG00000036301	APOBEC1	68	51.852	ENSGAGG00000004947	-	76	56.557	Gopherus_agassizii
ENSMLEG00000036301	APOBEC1	79	47.368	ENSGAGG00000006624	-	66	47.368	Gopherus_agassizii
ENSMLEG00000036301	APOBEC1	79	44.385	ENSGAGG00000021744	-	73	44.385	Gopherus_agassizii
ENSMLEG00000036301	APOBEC1	72	43.503	ENSGAGG00000021745	-	64	43.503	Gopherus_agassizii
ENSMLEG00000036301	APOBEC1	99	66.809	ENSHGLG00000001495	APOBEC1	99	66.809	Heterocephalus_glaber_female
ENSMLEG00000036301	APOBEC1	99	65.957	ENSHGLG00100002187	APOBEC1	99	65.957	Heterocephalus_glaber_male
ENSMLEG00000036301	APOBEC1	91	64.651	ENSSTOG00000021971	APOBEC1	100	79.592	Ictidomys_tridecemlineatus
ENSMLEG00000036301	APOBEC1	97	75.109	ENSJJAG00000022108	Apobec1	100	75.109	Jaculus_jaculus
ENSMLEG00000036301	APOBEC1	94	78.475	ENSLAFG00000030837	APOBEC1	100	78.475	Loxodonta_africana
ENSMLEG00000036301	APOBEC1	100	99.153	ENSMFAG00000000277	APOBEC1	100	99.153	Macaca_fascicularis
ENSMLEG00000036301	APOBEC1	100	98.729	ENSMNEG00000029670	APOBEC1	100	98.729	Macaca_nemestrina
ENSMLEG00000036301	APOBEC1	92	71.759	ENSMAUG00000022167	Apobec1	97	71.759	Mesocricetus_auratus
ENSMLEG00000036301	APOBEC1	100	84.746	ENSMICG00000043645	APOBEC1	100	84.746	Microcebus_murinus
ENSMLEG00000036301	APOBEC1	100	67.797	ENSMODG00000018004	APOBEC1	100	67.797	Monodelphis_domestica
ENSMLEG00000036301	APOBEC1	97	70.614	ENSMUSG00000040613	Apobec1	99	70.614	Mus_musculus
ENSMLEG00000036301	APOBEC1	97	69.298	MGP_PahariEiJ_G0022580	-	99	69.298	Mus_pahari
ENSMLEG00000036301	APOBEC1	97	70.614	MGP_SPRETEiJ_G0029857	Apobec1	99	70.614	Mus_spretus
ENSMLEG00000036301	APOBEC1	100	78.390	ENSMPUG00000017532	APOBEC1	100	78.390	Mustela_putorius_furo
ENSMLEG00000036301	APOBEC1	97	72.052	ENSNGAG00000022607	Apobec1	100	72.052	Nannospalax_galili
ENSMLEG00000036301	APOBEC1	100	95.763	ENSNLEG00000005342	APOBEC1	100	95.763	Nomascus_leucogenys
ENSMLEG00000036301	APOBEC1	100	66.102	ENSMEUG00000013406	APOBEC1	100	66.102	Notamacropus_eugenii
ENSMLEG00000036301	APOBEC1	77	65.193	ENSOPRG00000009508	-	100	65.193	Ochotona_princeps
ENSMLEG00000036301	APOBEC1	100	77.542	ENSOCUG00000025736	APOBEC1	88	77.542	Oryctolagus_cuniculus
ENSMLEG00000036301	APOBEC1	98	81.818	ENSOGAG00000026415	APOBEC1	98	81.818	Otolemur_garnettii
ENSMLEG00000036301	APOBEC1	100	73.729	ENSOARG00000002072	APOBEC1	99	73.729	Ovis_aries
ENSMLEG00000036301	APOBEC1	98	87.013	ENSPPAG00000027657	APOBEC1	98	87.013	Pan_paniscus
ENSMLEG00000036301	APOBEC1	100	82.203	ENSPPRG00000012182	APOBEC1	100	82.203	Panthera_pardus
ENSMLEG00000036301	APOBEC1	100	82.203	ENSPTIG00000020280	APOBEC1	100	82.203	Panthera_tigris_altaica
ENSMLEG00000036301	APOBEC1	100	94.492	ENSPTRG00000004614	APOBEC1	100	94.492	Pan_troglodytes
ENSMLEG00000036301	APOBEC1	100	99.153	ENSPANG00000021027	APOBEC1	100	99.153	Papio_anubis
ENSMLEG00000036301	APOBEC1	59	49.541	ENSPSIG00000012791	-	76	49.541	Pelodiscus_sinensis
ENSMLEG00000036301	APOBEC1	99	43.220	ENSPSIG00000012568	-	99	43.220	Pelodiscus_sinensis
ENSMLEG00000036301	APOBEC1	97	69.432	ENSPEMG00000023841	Apobec1	100	69.432	Peromyscus_maniculatus_bairdii
ENSMLEG00000036301	APOBEC1	100	69.068	ENSPCIG00000023973	APOBEC1	100	69.068	Phascolarctos_cinereus
ENSMLEG00000036301	APOBEC1	100	94.068	ENSPPYG00000004228	APOBEC1	95	94.068	Pongo_abelii
ENSMLEG00000036301	APOBEC1	79	81.283	ENSPCAG00000008733	APOBEC1	100	81.283	Procavia_capensis
ENSMLEG00000036301	APOBEC1	100	82.627	ENSPCOG00000013957	APOBEC1	100	82.627	Propithecus_coquereli
ENSMLEG00000036301	APOBEC1	100	65.254	ENSPVAG00000010709	APOBEC1	100	65.254	Pteropus_vampyrus
ENSMLEG00000036301	APOBEC1	97	68.860	ENSRNOG00000015411	Apobec1	99	68.860	Rattus_norvegicus
ENSMLEG00000036301	APOBEC1	100	97.034	ENSRBIG00000031161	APOBEC1	100	97.034	Rhinopithecus_bieti
ENSMLEG00000036301	APOBEC1	100	96.610	ENSRROG00000033576	APOBEC1	100	96.610	Rhinopithecus_roxellana
ENSMLEG00000036301	APOBEC1	73	92.486	ENSSBOG00000030587	APOBEC1	98	92.486	Saimiri_boliviensis_boliviensis
ENSMLEG00000036301	APOBEC1	96	70.044	ENSSHAG00000008925	APOBEC1	99	70.044	Sarcophilus_harrisii
ENSMLEG00000036301	APOBEC1	56	72.519	ENSSARG00000011972	-	99	72.519	Sorex_araneus
ENSMLEG00000036301	APOBEC1	73	68.023	ENSSARG00000000032	-	100	68.023	Sorex_araneus
ENSMLEG00000036301	APOBEC1	86	41.546	ENSSPUG00000009044	-	79	41.546	Sphenodon_punctatus
ENSMLEG00000036301	APOBEC1	100	78.814	ENSSSCG00000000668	APOBEC1	100	78.814	Sus_scrofa
ENSMLEG00000036301	APOBEC1	61	50.694	ENSTGUG00000013118	-	99	50.694	Taeniopygia_guttata
ENSMLEG00000036301	APOBEC1	94	77.376	ENSTBEG00000010043	APOBEC1	94	77.376	Tupaia_belangeri
ENSMLEG00000036301	APOBEC1	79	76.471	ENSTTRG00000014015	APOBEC1	100	76.471	Tursiops_truncatus
ENSMLEG00000036301	APOBEC1	98	80.519	ENSUAMG00000011636	APOBEC1	95	80.519	Ursus_americanus
ENSMLEG00000036301	APOBEC1	98	80.519	ENSUMAG00000016552	APOBEC1	95	80.519	Ursus_maritimus
ENSMLEG00000036301	APOBEC1	100	75.847	ENSVPAG00000001343	APOBEC1	100	75.847	Vicugna_pacos
ENSMLEG00000036301	APOBEC1	100	80.932	ENSVVUG00000010522	APOBEC1	100	80.932	Vulpes_vulpes