EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000037170 (Gene tree)
Gene ID: 105550425
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 94132 bases
Position: chrKN977089.1:1134204-1228335
Accession: 105550425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000026233	EST1	PF10374.9	9.7e-25	1	1
ENSMLEP00000026223	EST1	PF10374.9	1e-24	1	1
ENSMLEP00000026256	EST1	PF10374.9	1.1e-24	1	1
ENSMLEP00000026233	EST1_DNA_bind	PF10373.9	1.2e-55	1	1
ENSMLEP00000026223	EST1_DNA_bind	PF10373.9	1.2e-55	1	1
ENSMLEP00000026256	EST1_DNA_bind	PF10373.9	1.3e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000049768	SMG7-202	6087	XM_011995336	ENSMLEP00000026233	1137 (aa)	XP_011850726	A0A2K5ZEM0
ENSMLET00000049792	SMG7-204	3513	-	ENSMLEP00000026256	1170 (aa)	-	A0A2K5ZEK7
ENSMLET00000049758	SMG7-201	6237	XM_011995338	ENSMLEP00000026223	1145 (aa)	XP_011850728	A0A2K5ZEL0
ENSMLET00000049779	SMG7-203	219	-	ENSMLEP00000026244	73 (aa)	-	A0A2K5ZEJ2

Gene Model

Click here to download ENSMLEG00000037170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000037170's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000037170	SMG7	100	99.487	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSMLEG00000037170	SMG7	88	74.584	ENSAPOG00000009611	smg7	95	74.584	Acanthochromis_polyacanthus
ENSMLEG00000037170	SMG7	100	97.031	ENSAMEG00000002357	SMG7	100	97.031	Ailuropoda_melanoleuca
ENSMLEG00000037170	SMG7	100	61.856	ENSACIG00000015152	smg7	100	65.062	Amphilophus_citrinellus
ENSMLEG00000037170	SMG7	100	65.482	ENSAOCG00000013538	smg7	99	66.923	Amphiprion_ocellaris
ENSMLEG00000037170	SMG7	100	65.342	ENSAPEG00000007851	smg7	99	66.781	Amphiprion_percula
ENSMLEG00000037170	SMG7	99	65.874	ENSATEG00000006931	smg7	99	66.384	Anabas_testudineus
ENSMLEG00000037170	SMG7	100	89.064	ENSAPLG00000015811	SMG7	100	88.889	Anas_platyrhynchos
ENSMLEG00000037170	SMG7	100	87.619	ENSACAG00000014989	SMG7	96	88.139	Anolis_carolinensis
ENSMLEG00000037170	SMG7	100	98.777	ENSANAG00000028114	SMG7	100	98.769	Aotus_nancymaae
ENSMLEG00000037170	SMG7	100	64.538	ENSACLG00000022079	smg7	99	66.410	Astatotilapia_calliptera
ENSMLEG00000037170	SMG7	100	67.240	ENSAMXG00000020809	smg7	99	68.202	Astyanax_mexicanus
ENSMLEG00000037170	SMG7	100	96.581	ENSBTAG00000008003	SMG7	100	96.581	Bos_taurus
ENSMLEG00000037170	SMG7	100	98.515	ENSCJAG00000005135	SMG7	100	98.542	Callithrix_jacchus
ENSMLEG00000037170	SMG7	100	97.436	ENSCAFG00000013276	SMG7	100	97.436	Canis_familiaris
ENSMLEG00000037170	SMG7	100	97.436	ENSCAFG00020015475	SMG7	100	97.436	Canis_lupus_dingo
ENSMLEG00000037170	SMG7	97	96.558	ENSCHIG00000018192	SMG7	99	96.558	Capra_hircus
ENSMLEG00000037170	SMG7	100	97.449	ENSTSYG00000002667	SMG7	100	97.449	Carlito_syrichta
ENSMLEG00000037170	SMG7	99	97.770	ENSCPOG00000008906	SMG7	100	97.770	Cavia_porcellus
ENSMLEG00000037170	SMG7	100	98.865	ENSCCAG00000028596	SMG7	100	98.865	Cebus_capucinus
ENSMLEG00000037170	SMG7	100	100.000	ENSCATG00000011063	SMG7	100	100.000	Cercocebus_atys
ENSMLEG00000037170	SMG7	100	97.436	ENSCLAG00000010751	SMG7	100	97.436	Chinchilla_lanigera
ENSMLEG00000037170	SMG7	100	99.829	ENSCSAG00000012654	SMG7	100	99.829	Chlorocebus_sabaeus
ENSMLEG00000037170	SMG7	95	85.819	ENSCHOG00000010522	SMG7	93	89.971	Choloepus_hoffmanni
ENSMLEG00000037170	SMG7	100	92.167	ENSCPBG00000015724	SMG7	100	91.762	Chrysemys_picta_bellii
ENSMLEG00000037170	SMG7	100	99.913	ENSCANG00000015680	SMG7	100	99.913	Colobus_angolensis_palliatus
ENSMLEG00000037170	SMG7	99	96.312	ENSCGRG00001013705	Smg7	100	96.312	Cricetulus_griseus_chok1gshd
ENSMLEG00000037170	SMG7	98	96.258	ENSCGRG00000018401	Smg7	100	96.258	Cricetulus_griseus_crigri
ENSMLEG00000037170	SMG7	97	69.000	ENSCVAG00000011842	smg7	99	69.000	Cyprinodon_variegatus
ENSMLEG00000037170	SMG7	100	67.009	ENSDARG00000060767	smg7	99	67.848	Danio_rerio
ENSMLEG00000037170	SMG7	98	96.780	ENSDORG00000007331	Smg7	100	96.780	Dipodomys_ordii
ENSMLEG00000037170	SMG7	94	96.168	ENSETEG00000002654	SMG7	99	96.168	Echinops_telfairi
ENSMLEG00000037170	SMG7	100	97.949	ENSEASG00005006524	SMG7	100	97.949	Equus_asinus_asinus
ENSMLEG00000037170	SMG7	100	98.034	ENSECAG00000004313	SMG7	100	98.034	Equus_caballus
ENSMLEG00000037170	SMG7	93	96.863	ENSEEUG00000002024	SMG7	92	96.863	Erinaceus_europaeus
ENSMLEG00000037170	SMG7	100	65.424	ENSELUG00000010293	smg7	99	65.959	Esox_lucius
ENSMLEG00000037170	SMG7	99	97.690	ENSFCAG00000010900	SMG7	100	97.690	Felis_catus
ENSMLEG00000037170	SMG7	100	86.198	ENSFALG00000003047	SMG7	98	86.111	Ficedula_albicollis
ENSMLEG00000037170	SMG7	97	97.436	ENSFDAG00000012121	SMG7	99	97.326	Fukomys_damarensis
ENSMLEG00000037170	SMG7	99	64.777	ENSFHEG00000011073	smg7	99	64.140	Fundulus_heteroclitus
ENSMLEG00000037170	SMG7	82	73.320	ENSGMOG00000004916	smg7	92	66.860	Gadus_morhua
ENSMLEG00000037170	SMG7	100	89.423	ENSGALG00000004667	SMG7	100	89.248	Gallus_gallus
ENSMLEG00000037170	SMG7	99	64.828	ENSGAFG00000019000	smg7	99	64.655	Gambusia_affinis
ENSMLEG00000037170	SMG7	97	62.533	ENSGACG00000001634	smg7	99	65.061	Gasterosteus_aculeatus
ENSMLEG00000037170	SMG7	100	99.389	ENSGGOG00000002342	SMG7	100	99.389	Gorilla_gorilla
ENSMLEG00000037170	SMG7	100	65.140	ENSHBUG00000003726	smg7	97	72.589	Haplochromis_burtoni
ENSMLEG00000037170	SMG7	100	97.361	ENSHGLG00000009353	SMG7	100	97.415	Heterocephalus_glaber_female
ENSMLEG00000037170	SMG7	97	89.232	ENSHGLG00100004878	-	99	89.232	Heterocephalus_glaber_male
ENSMLEG00000037170	SMG7	100	97.449	ENSHGLG00100009637	-	100	97.449	Heterocephalus_glaber_male
ENSMLEG00000037170	SMG7	100	68.017	ENSIPUG00000016997	smg7	99	68.586	Ictalurus_punctatus
ENSMLEG00000037170	SMG7	98	98.346	ENSSTOG00000000401	SMG7	100	98.346	Ictidomys_tridecemlineatus
ENSMLEG00000037170	SMG7	97	95.587	ENSJJAG00000012351	Smg7	99	95.587	Jaculus_jaculus
ENSMLEG00000037170	SMG7	93	70.500	ENSKMAG00000004900	smg7	97	70.500	Kryptolebias_marmoratus
ENSMLEG00000037170	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSMLEG00000037170	SMG7	99	66.350	ENSLBEG00000002983	smg7	99	66.523	Labrus_bergylta
ENSMLEG00000037170	SMG7	100	74.700	ENSLACG00000000972	SMG7	99	75.847	Latimeria_chalumnae
ENSMLEG00000037170	SMG7	100	69.244	ENSLOCG00000002010	smg7	99	67.893	Lepisosteus_oculatus
ENSMLEG00000037170	SMG7	98	97.389	ENSLAFG00000008186	SMG7	100	97.389	Loxodonta_africana
ENSMLEG00000037170	SMG7	100	99.915	ENSMFAG00000031653	SMG7	100	99.915	Macaca_fascicularis
ENSMLEG00000037170	SMG7	100	100.000	ENSMMUG00000018458	SMG7	100	100.000	Macaca_mulatta
ENSMLEG00000037170	SMG7	100	100.000	ENSMNEG00000034798	SMG7	100	100.000	Macaca_nemestrina
ENSMLEG00000037170	SMG7	88	65.344	ENSMAMG00000018733	smg7	85	65.571	Mastacembelus_armatus
ENSMLEG00000037170	SMG7	100	65.004	ENSMZEG00005015247	smg7	99	65.983	Maylandia_zebra
ENSMLEG00000037170	SMG7	97	89.308	ENSMGAG00000001561	SMG7	98	89.128	Meleagris_gallopavo
ENSMLEG00000037170	SMG7	100	95.515	ENSMAUG00000019484	Smg7	100	96.693	Mesocricetus_auratus
ENSMLEG00000037170	SMG7	100	98.417	ENSMICG00000007145	SMG7	100	98.417	Microcebus_murinus
ENSMLEG00000037170	SMG7	100	95.515	ENSMOCG00000020748	Smg7	100	96.519	Microtus_ochrogaster
ENSMLEG00000037170	SMG7	99	64.298	ENSMMOG00000001524	smg7	99	64.589	Mola_mola
ENSMLEG00000037170	SMG7	92	93.169	ENSMODG00000007139	SMG7	99	93.169	Monodelphis_domestica
ENSMLEG00000037170	SMG7	97	68.159	ENSMALG00000000061	smg7	95	68.159	Monopterus_albus
ENSMLEG00000037170	SMG7	100	95.163	MGP_CAROLIEiJ_G0014704	Smg7	100	96.258	Mus_caroli
ENSMLEG00000037170	SMG7	100	95.075	ENSMUSG00000042772	Smg7	100	96.171	Mus_musculus
ENSMLEG00000037170	SMG7	100	95.251	MGP_PahariEiJ_G0027940	Smg7	100	96.258	Mus_pahari
ENSMLEG00000037170	SMG7	100	95.163	MGP_SPRETEiJ_G0015511	Smg7	100	96.258	Mus_spretus
ENSMLEG00000037170	SMG7	100	93.537	ENSMPUG00000011732	SMG7	97	97.415	Mustela_putorius_furo
ENSMLEG00000037170	SMG7	97	96.823	ENSMLUG00000015417	SMG7	99	96.823	Myotis_lucifugus
ENSMLEG00000037170	SMG7	100	96.394	ENSNGAG00000009836	Smg7	100	96.693	Nannospalax_galili
ENSMLEG00000037170	SMG7	98	61.391	ENSNBRG00000024343	smg7	98	70.476	Neolamprologus_brichardi
ENSMLEG00000037170	SMG7	100	99.658	ENSNLEG00000018018	SMG7	100	99.658	Nomascus_leucogenys
ENSMLEG00000037170	SMG7	71	92.276	ENSMEUG00000004681	SMG7	73	92.276	Notamacropus_eugenii
ENSMLEG00000037170	SMG7	94	84.932	ENSOPRG00000013942	SMG7	96	84.749	Ochotona_princeps
ENSMLEG00000037170	SMG7	100	97.361	ENSODEG00000010390	SMG7	100	97.476	Octodon_degus
ENSMLEG00000037170	SMG7	99	65.114	ENSONIG00000000277	smg7	99	66.096	Oreochromis_niloticus
ENSMLEG00000037170	SMG7	100	87.391	ENSOANG00000000994	SMG7	100	91.135	Ornithorhynchus_anatinus
ENSMLEG00000037170	SMG7	100	89.829	ENSOCUG00000005887	SMG7	95	90.000	Oryctolagus_cuniculus
ENSMLEG00000037170	SMG7	100	62.799	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSMLEG00000037170	SMG7	100	63.396	ENSORLG00020015779	smg7	99	64.021	Oryzias_latipes_hni
ENSMLEG00000037170	SMG7	100	63.265	ENSORLG00015012289	smg7	99	63.715	Oryzias_latipes_hsok
ENSMLEG00000037170	SMG7	100	63.010	ENSOMEG00000002328	smg7	99	62.604	Oryzias_melastigma
ENSMLEG00000037170	SMG7	94	96.624	ENSOGAG00000003107	SMG7	93	96.533	Otolemur_garnettii
ENSMLEG00000037170	SMG7	100	96.410	ENSOARG00000001352	SMG7	100	96.410	Ovis_aries
ENSMLEG00000037170	SMG7	100	99.651	ENSPPAG00000031619	SMG7	100	99.651	Pan_paniscus
ENSMLEG00000037170	SMG7	100	97.977	ENSPPRG00000011222	SMG7	100	97.977	Panthera_pardus
ENSMLEG00000037170	SMG7	100	97.904	ENSPTIG00000007242	SMG7	100	97.904	Panthera_tigris_altaica
ENSMLEG00000037170	SMG7	100	99.651	ENSPTRG00000001764	SMG7	100	99.651	Pan_troglodytes
ENSMLEG00000037170	SMG7	100	100.000	ENSPANG00000004520	SMG7	100	100.000	Papio_anubis
ENSMLEG00000037170	SMG7	100	65.285	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSMLEG00000037170	SMG7	97	91.996	ENSPSIG00000012201	SMG7	99	91.733	Pelodiscus_sinensis
ENSMLEG00000037170	SMG7	59	57.000	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSMLEG00000037170	SMG7	98	95.387	ENSPEMG00000011315	Smg7	100	95.387	Peromyscus_maniculatus_bairdii
ENSMLEG00000037170	SMG7	100	93.717	ENSPCIG00000003786	SMG7	100	93.497	Phascolarctos_cinereus
ENSMLEG00000037170	SMG7	100	63.714	ENSPFOG00000019219	smg7	99	63.110	Poecilia_formosa
ENSMLEG00000037170	SMG7	99	64.944	ENSPLAG00000001446	smg7	99	64.772	Poecilia_latipinna
ENSMLEG00000037170	SMG7	96	64.235	ENSPMEG00000005218	smg7	99	64.057	Poecilia_mexicana
ENSMLEG00000037170	SMG7	87	62.018	ENSPREG00000019039	smg7	91	61.957	Poecilia_reticulata
ENSMLEG00000037170	SMG7	100	99.736	ENSPPYG00000000427	SMG7	100	99.736	Pongo_abelii
ENSMLEG00000037170	SMG7	97	81.966	ENSPCAG00000008360	SMG7	94	85.793	Procavia_capensis
ENSMLEG00000037170	SMG7	100	98.291	ENSPCOG00000011996	SMG7	100	98.291	Propithecus_coquereli
ENSMLEG00000037170	SMG7	89	91.731	ENSPVAG00000000851	SMG7	89	91.731	Pteropus_vampyrus
ENSMLEG00000037170	SMG7	100	64.996	ENSPNYG00000007643	smg7	99	66.265	Pundamilia_nyererei
ENSMLEG00000037170	SMG7	100	67.808	ENSPNAG00000011374	smg7	98	69.697	Pygocentrus_nattereri
ENSMLEG00000037170	SMG7	100	95.113	ENSRNOG00000027962	Smg7	100	96.429	Rattus_norvegicus
ENSMLEG00000037170	SMG7	100	99.829	ENSRBIG00000036316	SMG7	100	99.829	Rhinopithecus_bieti
ENSMLEG00000037170	SMG7	100	99.829	ENSRROG00000035719	SMG7	100	99.829	Rhinopithecus_roxellana
ENSMLEG00000037170	SMG7	100	98.777	ENSSBOG00000023454	SMG7	100	98.777	Saimiri_boliviensis_boliviensis
ENSMLEG00000037170	SMG7	100	93.152	ENSSHAG00000013147	SMG7	100	92.888	Sarcophilus_harrisii
ENSMLEG00000037170	SMG7	92	76.842	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSMLEG00000037170	SMG7	100	65.444	ENSSMAG00000006067	smg7	99	66.064	Scophthalmus_maximus
ENSMLEG00000037170	SMG7	96	72.504	ENSSDUG00000017543	smg7	99	65.934	Seriola_dumerili
ENSMLEG00000037170	SMG7	99	90.459	ENSSPUG00000002064	SMG7	99	90.283	Sphenodon_punctatus
ENSMLEG00000037170	SMG7	100	66.062	ENSSPAG00000008733	smg7	100	65.978	Stegastes_partitus
ENSMLEG00000037170	SMG7	100	97.521	ENSSSCG00000015558	SMG7	100	97.521	Sus_scrofa
ENSMLEG00000037170	SMG7	99	89.339	ENSTGUG00000003928	SMG7	100	89.251	Taeniopygia_guttata
ENSMLEG00000037170	SMG7	100	60.917	ENSTNIG00000002802	smg7	99	63.613	Tetraodon_nigroviridis
ENSMLEG00000037170	SMG7	78	97.034	ENSTBEG00000003220	SMG7	75	97.034	Tupaia_belangeri
ENSMLEG00000037170	SMG7	94	97.443	ENSTTRG00000014778	SMG7	94	97.443	Tursiops_truncatus
ENSMLEG00000037170	SMG7	96	93.516	ENSUAMG00000017473	SMG7	100	93.516	Ursus_americanus
ENSMLEG00000037170	SMG7	100	93.624	ENSUMAG00000016389	SMG7	100	97.543	Ursus_maritimus
ENSMLEG00000037170	SMG7	100	97.521	ENSVVUG00000008976	SMG7	100	97.521	Vulpes_vulpes
ENSMLEG00000037170	SMG7	100	71.231	ENSXETG00000012528	smg7	100	71.206	Xenopus_tropicalis
ENSMLEG00000037170	SMG7	99	64.549	ENSXMAG00000007123	smg7	99	64.721	Xiphophorus_maculatus