EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000037455 (Gene tree)
Gene ID: 105540718
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 63110 bases
Position: chrKN974384.1:262523-325632
Accession: 105540718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000026513	zf-CCCH	PF00642.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000050053	RC3H1-201	5115	XM_011981414	ENSMLEP00000026513	1133 (aa)	XP_011836804	A0A2K5ZFD8

Gene Model

Click here to download ENSMLEG00000037455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000037455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000037455	RC3H1	96	52.572	ENSMLEG00000033809	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000037455	RC3H1	100	99.206	ENSG00000135870	RC3H1	100	99.206	Homo_sapiens
ENSMLEG00000037455	RC3H1	100	96.999	ENSAMEG00000015657	RC3H1	100	96.999	Ailuropoda_melanoleuca
ENSMLEG00000037455	RC3H1	100	88.492	ENSAPLG00000005341	RC3H1	100	88.492	Anas_platyrhynchos
ENSMLEG00000037455	RC3H1	100	85.515	ENSACAG00000015271	RC3H1	100	85.515	Anolis_carolinensis
ENSMLEG00000037455	RC3H1	100	99.029	ENSANAG00000036716	RC3H1	100	99.029	Aotus_nancymaae
ENSMLEG00000037455	RC3H1	100	95.940	ENSBTAG00000052708	RC3H1	100	95.940	Bos_taurus
ENSMLEG00000037455	RC3H1	100	98.676	ENSCJAG00000009106	RC3H1	100	98.676	Callithrix_jacchus
ENSMLEG00000037455	RC3H1	100	97.087	ENSCAFG00000014434	RC3H1	100	97.087	Canis_familiaris
ENSMLEG00000037455	RC3H1	100	97.002	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSMLEG00000037455	RC3H1	100	96.293	ENSCHIG00000002873	RC3H1	100	96.293	Capra_hircus
ENSMLEG00000037455	RC3H1	99	95.410	ENSTSYG00000003913	RC3H1	99	95.410	Carlito_syrichta
ENSMLEG00000037455	RC3H1	100	91.446	ENSCPOG00000004349	RC3H1	100	91.358	Cavia_porcellus
ENSMLEG00000037455	RC3H1	100	96.646	ENSCCAG00000025652	RC3H1	98	98.660	Cebus_capucinus
ENSMLEG00000037455	RC3H1	100	99.912	ENSCATG00000033497	RC3H1	100	99.912	Cercocebus_atys
ENSMLEG00000037455	RC3H1	100	94.974	ENSCLAG00000011267	RC3H1	100	94.974	Chinchilla_lanigera
ENSMLEG00000037455	RC3H1	96	99.448	ENSCSAG00000011823	RC3H1	85	99.448	Chlorocebus_sabaeus
ENSMLEG00000037455	RC3H1	100	90.000	ENSCPBG00000014670	RC3H1	100	90.000	Chrysemys_picta_bellii
ENSMLEG00000037455	RC3H1	100	99.559	ENSCANG00000032120	RC3H1	100	99.559	Colobus_angolensis_palliatus
ENSMLEG00000037455	RC3H1	100	94.263	ENSCGRG00001020812	Rc3h1	100	93.822	Cricetulus_griseus_chok1gshd
ENSMLEG00000037455	RC3H1	100	94.263	ENSCGRG00000011952	Rc3h1	100	93.822	Cricetulus_griseus_crigri
ENSMLEG00000037455	RC3H1	55	95.659	ENSDNOG00000011494	RC3H1	99	95.659	Dasypus_novemcinctus
ENSMLEG00000037455	RC3H1	100	95.940	ENSDORG00000004855	Rc3h1	100	95.940	Dipodomys_ordii
ENSMLEG00000037455	RC3H1	81	96.766	ENSETEG00000012064	RC3H1	87	96.766	Echinops_telfairi
ENSMLEG00000037455	RC3H1	100	96.028	ENSEASG00005017000	RC3H1	100	96.028	Equus_asinus_asinus
ENSMLEG00000037455	RC3H1	100	95.852	ENSECAG00000021208	RC3H1	100	95.852	Equus_caballus
ENSMLEG00000037455	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSMLEG00000037455	RC3H1	100	97.440	ENSFCAG00000014924	RC3H1	100	97.440	Felis_catus
ENSMLEG00000037455	RC3H1	100	87.511	ENSFALG00000002947	RC3H1	100	86.987	Ficedula_albicollis
ENSMLEG00000037455	RC3H1	100	95.150	ENSFDAG00000013303	RC3H1	100	95.150	Fukomys_damarensis
ENSMLEG00000037455	RC3H1	100	87.467	ENSGALG00000004587	RC3H1	100	87.467	Gallus_gallus
ENSMLEG00000037455	RC3H1	100	88.344	ENSGAGG00000018194	RC3H1	100	88.606	Gopherus_agassizii
ENSMLEG00000037455	RC3H1	100	92.260	ENSGGOG00000005735	RC3H1	100	92.260	Gorilla_gorilla
ENSMLEG00000037455	RC3H1	88	88.769	ENSHGLG00000004183	-	99	88.723	Heterocephalus_glaber_female
ENSMLEG00000037455	RC3H1	100	94.533	ENSHGLG00100008577	RC3H1	100	94.533	Heterocephalus_glaber_male
ENSMLEG00000037455	RC3H1	100	96.561	ENSSTOG00000016033	RC3H1	100	96.561	Ictidomys_tridecemlineatus
ENSMLEG00000037455	RC3H1	100	95.146	ENSJJAG00000018915	Rc3h1	100	94.969	Jaculus_jaculus
ENSMLEG00000037455	RC3H1	100	75.478	ENSLACG00000016186	RC3H1	100	78.594	Latimeria_chalumnae
ENSMLEG00000037455	RC3H1	97	97.541	ENSLAFG00000004367	RC3H1	100	97.541	Loxodonta_africana
ENSMLEG00000037455	RC3H1	100	99.823	ENSMFAG00000033725	RC3H1	100	99.823	Macaca_fascicularis
ENSMLEG00000037455	RC3H1	100	99.735	ENSMMUG00000000630	RC3H1	100	99.735	Macaca_mulatta
ENSMLEG00000037455	RC3H1	100	99.912	ENSMNEG00000035968	RC3H1	100	99.912	Macaca_nemestrina
ENSMLEG00000037455	RC3H1	97	94.456	ENSMAUG00000020864	Rc3h1	100	93.952	Mesocricetus_auratus
ENSMLEG00000037455	RC3H1	100	97.529	ENSMICG00000003000	RC3H1	100	97.529	Microcebus_murinus
ENSMLEG00000037455	RC3H1	93	92.898	ENSMOCG00000016587	Rc3h1	98	92.519	Microtus_ochrogaster
ENSMLEG00000037455	RC3H1	100	92.328	ENSMODG00000004289	RC3H1	100	92.416	Monodelphis_domestica
ENSMLEG00000037455	RC3H1	100	93.822	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.380	Mus_caroli
ENSMLEG00000037455	RC3H1	100	93.645	ENSMUSG00000040423	Rc3h1	100	93.204	Mus_musculus
ENSMLEG00000037455	RC3H1	100	93.469	MGP_PahariEiJ_G0027992	Rc3h1	100	93.027	Mus_pahari
ENSMLEG00000037455	RC3H1	100	93.469	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.027	Mus_spretus
ENSMLEG00000037455	RC3H1	100	96.737	ENSMPUG00000004747	RC3H1	100	96.737	Mustela_putorius_furo
ENSMLEG00000037455	RC3H1	100	95.763	ENSMLUG00000011127	RC3H1	100	95.763	Myotis_lucifugus
ENSMLEG00000037455	RC3H1	100	95.852	ENSNGAG00000011135	Rc3h1	100	95.410	Nannospalax_galili
ENSMLEG00000037455	RC3H1	100	99.117	ENSNLEG00000015327	RC3H1	100	99.117	Nomascus_leucogenys
ENSMLEG00000037455	RC3H1	99	83.024	ENSOPRG00000013068	RC3H1	99	83.112	Ochotona_princeps
ENSMLEG00000037455	RC3H1	100	94.797	ENSODEG00000014185	RC3H1	100	94.797	Octodon_degus
ENSMLEG00000037455	RC3H1	100	91.878	ENSOANG00000000924	RC3H1	100	91.790	Ornithorhynchus_anatinus
ENSMLEG00000037455	RC3H1	99	96.061	ENSOCUG00000004930	RC3H1	98	96.061	Oryctolagus_cuniculus
ENSMLEG00000037455	RC3H1	100	90.308	ENSOGAG00000004044	RC3H1	100	90.308	Otolemur_garnettii
ENSMLEG00000037455	RC3H1	100	96.579	ENSOARG00000013011	RC3H1	100	96.579	Ovis_aries
ENSMLEG00000037455	RC3H1	100	99.206	ENSPPAG00000039253	RC3H1	100	99.206	Pan_paniscus
ENSMLEG00000037455	RC3H1	100	96.734	ENSPPRG00000009007	RC3H1	100	96.734	Panthera_pardus
ENSMLEG00000037455	RC3H1	100	97.100	ENSPTIG00000015326	RC3H1	100	97.100	Panthera_tigris_altaica
ENSMLEG00000037455	RC3H1	100	99.206	ENSPTRG00000001702	RC3H1	100	99.206	Pan_troglodytes
ENSMLEG00000037455	RC3H1	100	99.823	ENSPANG00000008886	RC3H1	100	99.823	Papio_anubis
ENSMLEG00000037455	RC3H1	100	89.045	ENSPSIG00000016181	RC3H1	100	89.308	Pelodiscus_sinensis
ENSMLEG00000037455	RC3H1	100	93.822	ENSPEMG00000011966	Rc3h1	100	93.469	Peromyscus_maniculatus_bairdii
ENSMLEG00000037455	RC3H1	70	94.304	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSMLEG00000037455	RC3H1	100	95.852	ENSPPYG00000000490	RC3H1	98	98.469	Pongo_abelii
ENSMLEG00000037455	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSMLEG00000037455	RC3H1	83	96.795	ENSPCOG00000021795	RC3H1	96	96.795	Propithecus_coquereli
ENSMLEG00000037455	RC3H1	100	88.085	ENSPVAG00000007593	RC3H1	100	88.085	Pteropus_vampyrus
ENSMLEG00000037455	RC3H1	97	61.627	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSMLEG00000037455	RC3H1	100	99.647	ENSRBIG00000037743	RC3H1	100	99.647	Rhinopithecus_bieti
ENSMLEG00000037455	RC3H1	100	99.559	ENSRROG00000036546	RC3H1	100	99.559	Rhinopithecus_roxellana
ENSMLEG00000037455	RC3H1	93	89.489	ENSSBOG00000010664	RC3H1	100	92.431	Saimiri_boliviensis_boliviensis
ENSMLEG00000037455	RC3H1	100	91.189	ENSSHAG00000007589	RC3H1	100	91.278	Sarcophilus_harrisii
ENSMLEG00000037455	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSMLEG00000037455	RC3H1	100	84.676	ENSSPUG00000018472	RC3H1	100	84.137	Sphenodon_punctatus
ENSMLEG00000037455	RC3H1	100	97.440	ENSSSCG00000015498	RC3H1	100	97.440	Sus_scrofa
ENSMLEG00000037455	RC3H1	100	87.807	ENSTGUG00000004090	RC3H1	100	87.807	Taeniopygia_guttata
ENSMLEG00000037455	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSMLEG00000037455	RC3H1	100	96.652	ENSTTRG00000008572	RC3H1	100	96.652	Tursiops_truncatus
ENSMLEG00000037455	RC3H1	100	96.381	ENSUAMG00000019525	RC3H1	100	96.381	Ursus_americanus
ENSMLEG00000037455	RC3H1	100	96.914	ENSUMAG00000020087	RC3H1	100	96.914	Ursus_maritimus
ENSMLEG00000037455	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSMLEG00000037455	RC3H1	100	96.746	ENSVVUG00000014201	RC3H1	100	96.746	Vulpes_vulpes
ENSMLEG00000037455	RC3H1	100	79.199	ENSXETG00000020030	rc3h1	100	78.746	Xenopus_tropicalis