EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000039043 (Gene tree)
Gene ID: 105537066
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 94945 bases
Position: chrKN973740.1:1416203-1511147
Accession: 105537066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000029694	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000053253	PSPC1-201	1278	XM_011976544	ENSMLEP00000029694	425 (aa)	XP_011831934	A0A2K5ZPF4

Gene Model

Click here to download ENSMLEG00000039043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000039043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000039043	PSPC1	94	58.647	ENSMLEG00000042452	NONO	87	72.549
ENSMLEG00000039043	PSPC1	90	53.333	ENSMLEG00000010643	-	79	64.336
ENSMLEG00000039043	PSPC1	84	48.767	ENSMLEG00000035352	-	77	60.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000039043	PSPC1	100	99.749	ENSG00000121390	PSPC1	100	99.749	Homo_sapiens
ENSMLEG00000039043	PSPC1	94	70.120	ENSAPOG00000015946	pspc1	67	73.370	Acanthochromis_polyacanthus
ENSMLEG00000039043	PSPC1	100	100.000	ENSAMEG00000017420	PSPC1	100	99.248	Ailuropoda_melanoleuca
ENSMLEG00000039043	PSPC1	94	60.880	ENSACIG00000018695	pspc1	74	57.946	Amphilophus_citrinellus
ENSMLEG00000039043	PSPC1	94	69.065	ENSAOCG00000005279	pspc1	66	72.826	Amphiprion_ocellaris
ENSMLEG00000039043	PSPC1	94	70.343	ENSAPEG00000015927	pspc1	67	72.826	Amphiprion_percula
ENSMLEG00000039043	PSPC1	94	55.990	ENSATEG00000004878	pspc1	64	59.773	Anabas_testudineus
ENSMLEG00000039043	PSPC1	94	94.750	ENSAPLG00000006246	PSPC1	99	94.750	Anas_platyrhynchos
ENSMLEG00000039043	PSPC1	94	59.057	ENSAPLG00000003643	SFPQ	57	68.317	Anas_platyrhynchos
ENSMLEG00000039043	PSPC1	94	90.571	ENSACAG00000002093	PSPC1	76	90.819	Anolis_carolinensis
ENSMLEG00000039043	PSPC1	100	100.000	ENSANAG00000000059	PSPC1	100	99.499	Aotus_nancymaae
ENSMLEG00000039043	PSPC1	94	60.345	ENSACLG00000027220	pspc1	74	56.543	Astatotilapia_calliptera
ENSMLEG00000039043	PSPC1	94	67.225	ENSAMXG00000036881	pspc1	68	72.386	Astyanax_mexicanus
ENSMLEG00000039043	PSPC1	100	98.997	ENSBTAG00000003934	PSPC1	84	98.997	Bos_taurus
ENSMLEG00000039043	PSPC1	100	100.000	ENSCJAG00000004554	PSPC1	100	99.499	Callithrix_jacchus
ENSMLEG00000039043	PSPC1	100	100.000	ENSCAFG00020002009	PSPC1	100	99.248	Canis_lupus_dingo
ENSMLEG00000039043	PSPC1	100	98.997	ENSCHIG00000016708	PSPC1	84	98.997	Capra_hircus
ENSMLEG00000039043	PSPC1	97	89.614	ENSTSYG00000032882	PSPC1	88	89.027	Carlito_syrichta
ENSMLEG00000039043	PSPC1	100	98.246	ENSCPOG00000000395	PSPC1	100	98.246	Cavia_porcellus
ENSMLEG00000039043	PSPC1	100	100.000	ENSCCAG00000033498	PSPC1	100	99.499	Cebus_capucinus
ENSMLEG00000039043	PSPC1	99	100.000	ENSCATG00000036434	PSPC1	100	100.000	Cercocebus_atys
ENSMLEG00000039043	PSPC1	94	98.246	ENSCLAG00000005241	PSPC1	89	98.246	Chinchilla_lanigera
ENSMLEG00000039043	PSPC1	100	100.000	ENSCHOG00000008913	PSPC1	81	100.000	Choloepus_hoffmanni
ENSMLEG00000039043	PSPC1	94	94.000	ENSCPBG00000020859	PSPC1	76	94.000	Chrysemys_picta_bellii
ENSMLEG00000039043	PSPC1	94	86.967	ENSCANG00000018948	PSPC1	87	100.000	Colobus_angolensis_palliatus
ENSMLEG00000039043	PSPC1	100	98.496	ENSCGRG00001018368	Pspc1	100	98.496	Cricetulus_griseus_chok1gshd
ENSMLEG00000039043	PSPC1	100	98.496	ENSCGRG00000011724	Pspc1	100	98.496	Cricetulus_griseus_crigri
ENSMLEG00000039043	PSPC1	94	65.602	ENSCVAG00000007679	-	67	67.760	Cyprinodon_variegatus
ENSMLEG00000039043	PSPC1	94	71.220	ENSDARG00000006621	pspc1	99	67.561	Danio_rerio
ENSMLEG00000039043	PSPC1	100	100.000	ENSDNOG00000011078	PSPC1	81	100.000	Dasypus_novemcinctus
ENSMLEG00000039043	PSPC1	100	100.000	ENSDORG00000016050	Pspc1	82	100.000	Dipodomys_ordii
ENSMLEG00000039043	PSPC1	67	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSMLEG00000039043	PSPC1	53	48.606	ENSEBUG00000010133	pspc1	57	52.273	Eptatretus_burgeri
ENSMLEG00000039043	PSPC1	94	57.820	ENSEBUG00000003964	-	51	73.498	Eptatretus_burgeri
ENSMLEG00000039043	PSPC1	100	99.248	ENSEASG00005000119	PSPC1	100	99.248	Equus_asinus_asinus
ENSMLEG00000039043	PSPC1	100	99.248	ENSECAG00000017286	PSPC1	100	99.248	Equus_caballus
ENSMLEG00000039043	PSPC1	67	100.000	ENSEEUG00000011288	-	88	83.838	Erinaceus_europaeus
ENSMLEG00000039043	PSPC1	94	70.803	ENSELUG00000003746	pspc1	63	83.525	Esox_lucius
ENSMLEG00000039043	PSPC1	100	99.499	ENSFCAG00000027841	PSPC1	100	99.499	Felis_catus
ENSMLEG00000039043	PSPC1	94	94.750	ENSFALG00000008750	PSPC1	76	94.750	Ficedula_albicollis
ENSMLEG00000039043	PSPC1	100	98.246	ENSFDAG00000002617	PSPC1	100	98.246	Fukomys_damarensis
ENSMLEG00000039043	PSPC1	94	64.851	ENSGMOG00000015074	pspc1	74	64.020	Gadus_morhua
ENSMLEG00000039043	PSPC1	94	94.750	ENSGALG00000017142	PSPC1	76	94.750	Gallus_gallus
ENSMLEG00000039043	PSPC1	62	79.323	ENSGAFG00000006327	pspc1	55	79.323	Gambusia_affinis
ENSMLEG00000039043	PSPC1	94	64.925	ENSGACG00000014901	pspc1	74	73.962	Gasterosteus_aculeatus
ENSMLEG00000039043	PSPC1	94	94.000	ENSGAGG00000019164	PSPC1	76	94.000	Gopherus_agassizii
ENSMLEG00000039043	PSPC1	100	99.499	ENSGGOG00000003414	PSPC1	100	99.499	Gorilla_gorilla
ENSMLEG00000039043	PSPC1	94	69.802	ENSHBUG00000001139	pspc1	75	69.059	Haplochromis_burtoni
ENSMLEG00000039043	PSPC1	100	98.246	ENSHGLG00000018811	PSPC1	100	98.246	Heterocephalus_glaber_female
ENSMLEG00000039043	PSPC1	59	100.000	ENSHGLG00100007962	PSPC1	100	100.000	Heterocephalus_glaber_male
ENSMLEG00000039043	PSPC1	75	69.782	ENSHCOG00000013251	pspc1	69	72.436	Hippocampus_comes
ENSMLEG00000039043	PSPC1	94	72.861	ENSIPUG00000013192	pspc1	76	72.616	Ictalurus_punctatus
ENSMLEG00000039043	PSPC1	100	100.000	ENSSTOG00000026833	PSPC1	100	98.747	Ictidomys_tridecemlineatus
ENSMLEG00000039043	PSPC1	100	100.000	ENSJJAG00000018334	Pspc1	100	98.496	Jaculus_jaculus
ENSMLEG00000039043	PSPC1	94	54.364	ENSKMAG00000013525	-	70	52.357	Kryptolebias_marmoratus
ENSMLEG00000039043	PSPC1	94	67.143	ENSLBEG00000004474	pspc1	64	73.088	Labrus_bergylta
ENSMLEG00000039043	PSPC1	94	85.250	ENSLACG00000010762	PSPC1	76	85.250	Latimeria_chalumnae
ENSMLEG00000039043	PSPC1	94	85.213	ENSLOCG00000010832	pspc1	78	85.213	Lepisosteus_oculatus
ENSMLEG00000039043	PSPC1	100	99.248	ENSLAFG00000010968	PSPC1	100	99.248	Loxodonta_africana
ENSMLEG00000039043	PSPC1	99	100.000	ENSMFAG00000032728	PSPC1	100	100.000	Macaca_fascicularis
ENSMLEG00000039043	PSPC1	99	100.000	ENSMMUG00000020262	PSPC1	100	100.000	Macaca_mulatta
ENSMLEG00000039043	PSPC1	99	100.000	ENSMNEG00000027401	PSPC1	100	100.000	Macaca_nemestrina
ENSMLEG00000039043	PSPC1	94	67.139	ENSMAMG00000004333	pspc1	66	71.739	Mastacembelus_armatus
ENSMLEG00000039043	PSPC1	94	60.345	ENSMZEG00005005726	pspc1	74	56.543	Maylandia_zebra
ENSMLEG00000039043	PSPC1	94	94.750	ENSMGAG00000015134	PSPC1	99	94.750	Meleagris_gallopavo
ENSMLEG00000039043	PSPC1	86	91.124	ENSMAUG00000021067	Pspc1	99	91.124	Mesocricetus_auratus
ENSMLEG00000039043	PSPC1	99	100.000	ENSMICG00000013970	PSPC1	100	98.997	Microcebus_murinus
ENSMLEG00000039043	PSPC1	100	98.747	ENSMOCG00000006060	Pspc1	100	98.747	Microtus_ochrogaster
ENSMLEG00000039043	PSPC1	91	97.507	ENSMODG00000008029	PSPC1	78	97.507	Monodelphis_domestica
ENSMLEG00000039043	PSPC1	94	69.554	ENSMALG00000008914	pspc1	75	66.995	Monopterus_albus
ENSMLEG00000039043	PSPC1	100	98.250	MGP_CAROLIEiJ_G0019341	Pspc1	100	98.250	Mus_caroli
ENSMLEG00000039043	PSPC1	100	98.500	ENSMUSG00000021938	Pspc1	100	98.500	Mus_musculus
ENSMLEG00000039043	PSPC1	100	98.250	MGP_PahariEiJ_G0030359	Pspc1	100	98.250	Mus_pahari
ENSMLEG00000039043	PSPC1	100	100.000	MGP_SPRETEiJ_G0020232	Pspc1	100	98.500	Mus_spretus
ENSMLEG00000039043	PSPC1	100	99.248	ENSMPUG00000013347	PSPC1	100	99.248	Mustela_putorius_furo
ENSMLEG00000039043	PSPC1	100	98.010	ENSMLUG00000017663	PSPC1	100	98.010	Myotis_lucifugus
ENSMLEG00000039043	PSPC1	100	98.496	ENSNGAG00000011271	Pspc1	100	98.496	Nannospalax_galili
ENSMLEG00000039043	PSPC1	62	73.004	ENSNBRG00000014059	pspc1	61	68.539	Neolamprologus_brichardi
ENSMLEG00000039043	PSPC1	94	99.749	ENSNLEG00000001294	PSPC1	76	99.749	Nomascus_leucogenys
ENSMLEG00000039043	PSPC1	80	100.000	ENSMEUG00000000476	PSPC1	84	100.000	Notamacropus_eugenii
ENSMLEG00000039043	PSPC1	94	85.250	ENSODEG00000019012	-	76	86.420	Octodon_degus
ENSMLEG00000039043	PSPC1	94	83.960	ENSODEG00000007817	-	75	79.012	Octodon_degus
ENSMLEG00000039043	PSPC1	94	70.050	ENSONIG00000012010	pspc1	75	68.293	Oreochromis_niloticus
ENSMLEG00000039043	PSPC1	94	69.825	ENSOANG00000011381	-	79	67.332	Ornithorhynchus_anatinus
ENSMLEG00000039043	PSPC1	94	97.494	ENSOANG00000009017	-	100	97.494	Ornithorhynchus_anatinus
ENSMLEG00000039043	PSPC1	99	100.000	ENSOCUG00000006153	PSPC1	100	98.997	Oryctolagus_cuniculus
ENSMLEG00000039043	PSPC1	94	70.343	ENSORLG00000004232	-	75	63.420	Oryzias_latipes
ENSMLEG00000039043	PSPC1	94	68.627	ENSORLG00020000578	PSPC1	75	64.578	Oryzias_latipes_hni
ENSMLEG00000039043	PSPC1	94	70.588	ENSORLG00015017480	pspc1	70	68.267	Oryzias_latipes_hsok
ENSMLEG00000039043	PSPC1	99	100.000	ENSOGAG00000012643	PSPC1	100	99.499	Otolemur_garnettii
ENSMLEG00000039043	PSPC1	100	98.504	ENSOARG00000014163	PSPC1	100	98.504	Ovis_aries
ENSMLEG00000039043	PSPC1	94	91.980	ENSPPAG00000009836	PSPC1	83	91.980	Pan_paniscus
ENSMLEG00000039043	PSPC1	100	99.499	ENSPPRG00000008833	PSPC1	100	99.499	Panthera_pardus
ENSMLEG00000039043	PSPC1	100	87.815	ENSPTIG00000016917	PSPC1	100	87.815	Panthera_tigris_altaica
ENSMLEG00000039043	PSPC1	98	97.692	ENSPTRG00000005677	PSPC1	99	99.724	Pan_troglodytes
ENSMLEG00000039043	PSPC1	99	100.000	ENSPANG00000001992	PSPC1	100	100.000	Papio_anubis
ENSMLEG00000039043	PSPC1	85	78.788	ENSPKIG00000003578	pspc1	68	77.989	Paramormyrops_kingsleyae
ENSMLEG00000039043	PSPC1	94	93.750	ENSPSIG00000005168	PSPC1	76	93.750	Pelodiscus_sinensis
ENSMLEG00000039043	PSPC1	53	77.093	ENSPMGG00000015135	pspc1	62	76.991	Periophthalmus_magnuspinnatus
ENSMLEG00000039043	PSPC1	100	100.000	ENSPEMG00000015214	Pspc1	100	98.747	Peromyscus_maniculatus_bairdii
ENSMLEG00000039043	PSPC1	94	97.744	ENSPCIG00000017680	PSPC1	100	97.744	Phascolarctos_cinereus
ENSMLEG00000039043	PSPC1	99	66.898	ENSPFOG00000003362	pspc1	76	67.397	Poecilia_formosa
ENSMLEG00000039043	PSPC1	99	66.898	ENSPLAG00000011540	pspc1	75	67.397	Poecilia_latipinna
ENSMLEG00000039043	PSPC1	99	66.667	ENSPMEG00000008322	pspc1	75	67.153	Poecilia_mexicana
ENSMLEG00000039043	PSPC1	94	69.193	ENSPREG00000007786	pspc1	75	67.397	Poecilia_reticulata
ENSMLEG00000039043	PSPC1	100	99.248	ENSPPYG00000005186	PSPC1	100	99.248	Pongo_abelii
ENSMLEG00000039043	PSPC1	59	100.000	ENSPCAG00000008314	-	66	100.000	Procavia_capensis
ENSMLEG00000039043	PSPC1	99	100.000	ENSPCOG00000014364	PSPC1	100	93.484	Propithecus_coquereli
ENSMLEG00000039043	PSPC1	100	100.000	ENSPVAG00000005036	PSPC1	100	95.489	Pteropus_vampyrus
ENSMLEG00000039043	PSPC1	94	60.345	ENSPNYG00000008893	pspc1	74	56.373	Pundamilia_nyererei
ENSMLEG00000039043	PSPC1	94	71.394	ENSPNAG00000016511	pspc1	77	71.394	Pygocentrus_nattereri
ENSMLEG00000039043	PSPC1	100	100.000	ENSRNOG00000020782	Pspc1	100	98.496	Rattus_norvegicus
ENSMLEG00000039043	PSPC1	94	99.749	ENSRBIG00000036057	PSPC1	82	99.749	Rhinopithecus_bieti
ENSMLEG00000039043	PSPC1	99	100.000	ENSRROG00000036334	PSPC1	100	99.749	Rhinopithecus_roxellana
ENSMLEG00000039043	PSPC1	94	91.729	ENSSBOG00000028172	PSPC1	86	100.000	Saimiri_boliviensis_boliviensis
ENSMLEG00000039043	PSPC1	99	95.833	ENSSHAG00000004696	PSPC1	100	91.022	Sarcophilus_harrisii
ENSMLEG00000039043	PSPC1	85	80.165	ENSSFOG00015001395	pspc1	76	79.235	Scleropages_formosus
ENSMLEG00000039043	PSPC1	94	66.427	ENSSMAG00000001761	pspc1	67	78.439	Scophthalmus_maximus
ENSMLEG00000039043	PSPC1	94	68.445	ENSSDUG00000010651	pspc1	64	74.185	Seriola_dumerili
ENSMLEG00000039043	PSPC1	94	63.092	ENSSLDG00000004284	pspc1	68	59.838	Seriola_lalandi_dorsalis
ENSMLEG00000039043	PSPC1	100	90.727	ENSSARG00000000888	PSPC1	100	90.727	Sorex_araneus
ENSMLEG00000039043	PSPC1	94	78.554	ENSSPUG00000008550	PSPC1	75	78.803	Sphenodon_punctatus
ENSMLEG00000039043	PSPC1	94	68.085	ENSSPAG00000001921	pspc1	66	72.283	Stegastes_partitus
ENSMLEG00000039043	PSPC1	100	100.000	ENSSSCG00000009569	PSPC1	84	99.248	Sus_scrofa
ENSMLEG00000039043	PSPC1	94	94.750	ENSTGUG00000011295	PSPC1	86	94.750	Taeniopygia_guttata
ENSMLEG00000039043	PSPC1	94	63.325	ENSTRUG00000011335	pspc1	65	66.476	Takifugu_rubripes
ENSMLEG00000039043	PSPC1	94	65.347	ENSTNIG00000010358	pspc1	72	66.209	Tetraodon_nigroviridis
ENSMLEG00000039043	PSPC1	94	83.208	ENSTBEG00000002361	PSPC1	77	80.952	Tupaia_belangeri
ENSMLEG00000039043	PSPC1	100	100.000	ENSTTRG00000003343	PSPC1	100	99.248	Tursiops_truncatus
ENSMLEG00000039043	PSPC1	60	100.000	ENSUAMG00000012309	PSPC1	100	100.000	Ursus_americanus
ENSMLEG00000039043	PSPC1	94	98.997	ENSUMAG00000013993	PSPC1	82	98.997	Ursus_maritimus
ENSMLEG00000039043	PSPC1	94	99.248	ENSVPAG00000010029	PSPC1	100	99.248	Vicugna_pacos
ENSMLEG00000039043	PSPC1	100	100.000	ENSVVUG00000006414	PSPC1	100	100.000	Vulpes_vulpes
ENSMLEG00000039043	PSPC1	62	78.195	ENSXCOG00000017438	pspc1	63	78.195	Xiphophorus_couchianus
ENSMLEG00000039043	PSPC1	62	78.571	ENSXMAG00000007929	pspc1	63	78.571	Xiphophorus_maculatus