EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000039307 (Gene tree)
Gene ID: 105554189
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 18993 bases
Position: chrKN978558.1:461718-480710
Accession: 105554189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000030349	tRNA-synt_1g	PF09334.11	2.3e-10	1	1
ENSMLEP00000030329	tRNA-synt_1g	PF09334.11	2.3e-10	1	1
ENSMLEP00000030342	tRNA-synt_1g	PF09334.11	2.5e-10	1	1
ENSMLEP00000030349	Anticodon_1	PF08264.13	1.5e-32	1	1
ENSMLEP00000030329	Anticodon_1	PF08264.13	1.5e-32	1	1
ENSMLEP00000030342	Anticodon_1	PF08264.13	1.5e-32	1	1
ENSMLEP00000030329	tRNA-synt_1	PF00133.22	8.3e-201	1	1
ENSMLEP00000030342	tRNA-synt_1	PF00133.22	4.1e-182	1	1
ENSMLEP00000030349	tRNA-synt_1	PF00133.22	1.1e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000053905	VARS-202	3801	-	ENSMLEP00000030342	1266 (aa)	-	A0A2K5ZRA4
ENSMLET00000053912	VARS-203	3747	-	ENSMLEP00000030349	1248 (aa)	-	A0A2K5ZRA3
ENSMLET00000053892	VARS-201	3976	XM_012000543	ENSMLEP00000030329	1264 (aa)	XP_011855933	A0A2K5ZR86

Gene Model

Click here to download ENSMLEG00000039307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000039307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000039307	VARS	81	50.677	ENSMLEG00000041728	VARS2	89	51.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000039307	VARS	100	98.734	ENSG00000204394	VARS	100	98.851	Homo_sapiens
ENSMLEG00000039307	VARS	98	64.876	ENSAPOG00000020921	vars	99	64.555	Acanthochromis_polyacanthus
ENSMLEG00000039307	VARS	98	64.876	ENSAPOG00000020691	vars	99	64.555	Acanthochromis_polyacanthus
ENSMLEG00000039307	VARS	100	95.020	ENSAMEG00000006417	VARS	100	95.020	Ailuropoda_melanoleuca
ENSMLEG00000039307	VARS	100	65.804	ENSACIG00000013752	vars	100	65.490	Amphilophus_citrinellus
ENSMLEG00000039307	VARS	100	64.701	ENSAOCG00000002447	vars	100	64.359	Amphiprion_ocellaris
ENSMLEG00000039307	VARS	100	64.701	ENSAPEG00000010638	vars	99	64.875	Amphiprion_percula
ENSMLEG00000039307	VARS	100	64.724	ENSATEG00000020219	vars	100	64.331	Anabas_testudineus
ENSMLEG00000039307	VARS	90	70.598	ENSACAG00000029133	-	99	71.032	Anolis_carolinensis
ENSMLEG00000039307	VARS	100	97.389	ENSANAG00000015453	VARS	100	97.389	Aotus_nancymaae
ENSMLEG00000039307	VARS	100	65.039	ENSACLG00000025699	vars	97	64.729	Astatotilapia_calliptera
ENSMLEG00000039307	VARS	94	66.222	ENSAMXG00000017716	vars	95	66.222	Astyanax_mexicanus
ENSMLEG00000039307	VARS	100	95.016	ENSBTAG00000005631	VARS	100	95.016	Bos_taurus
ENSMLEG00000039307	VARS	100	97.231	ENSCJAG00000002604	VARS	100	97.231	Callithrix_jacchus
ENSMLEG00000039307	VARS	100	94.620	ENSCAFG00000000636	VARS	100	94.620	Canis_familiaris
ENSMLEG00000039307	VARS	94	94.510	ENSCAFG00020020790	VARS	96	94.510	Canis_lupus_dingo
ENSMLEG00000039307	VARS	100	95.174	ENSCHIG00000011008	VARS	100	95.174	Capra_hircus
ENSMLEG00000039307	VARS	100	95.886	ENSTSYG00000001567	VARS	100	95.886	Carlito_syrichta
ENSMLEG00000039307	VARS	91	90.484	ENSCAPG00000013736	VARS	99	90.484	Cavia_aperea
ENSMLEG00000039307	VARS	100	91.614	ENSCPOG00000000870	VARS	100	91.614	Cavia_porcellus
ENSMLEG00000039307	VARS	100	97.389	ENSCCAG00000035656	VARS	100	97.512	Cebus_capucinus
ENSMLEG00000039307	VARS	100	99.684	ENSCATG00000022394	VARS	100	99.684	Cercocebus_atys
ENSMLEG00000039307	VARS	88	89.676	ENSCLAG00000009470	VARS	92	89.676	Chinchilla_lanigera
ENSMLEG00000039307	VARS	100	99.525	ENSCSAG00000008784	VARS	100	99.525	Chlorocebus_sabaeus
ENSMLEG00000039307	VARS	77	74.435	ENSCPBG00000007943	VARS	96	74.538	Chrysemys_picta_bellii
ENSMLEG00000039307	VARS	100	99.209	ENSCANG00000033570	VARS	100	99.209	Colobus_angolensis_palliatus
ENSMLEG00000039307	VARS	100	92.959	ENSCGRG00001005686	Vars	100	92.959	Cricetulus_griseus_chok1gshd
ENSMLEG00000039307	VARS	92	87.856	ENSCGRG00000013352	Vars	78	87.856	Cricetulus_griseus_crigri
ENSMLEG00000039307	VARS	100	64.585	ENSCSEG00000019652	vars	100	64.664	Cynoglossus_semilaevis
ENSMLEG00000039307	VARS	100	65.268	ENSCVAG00000022398	vars	100	65.116	Cyprinodon_variegatus
ENSMLEG00000039307	VARS	100	65.012	ENSDARG00000044575	vars	100	65.163	Danio_rerio
ENSMLEG00000039307	VARS	84	93.133	ENSDORG00000016433	Vars	95	93.133	Dipodomys_ordii
ENSMLEG00000039307	VARS	69	86.438	ENSETEG00000003824	VARS	76	86.438	Echinops_telfairi
ENSMLEG00000039307	VARS	50	70.652	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSMLEG00000039307	VARS	57	61.951	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSMLEG00000039307	VARS	100	95.649	ENSEASG00005015673	VARS	100	95.649	Equus_asinus_asinus
ENSMLEG00000039307	VARS	100	94.625	ENSECAG00000014620	VARS	100	95.099	Equus_caballus
ENSMLEG00000039307	VARS	83	93.080	ENSEEUG00000004116	VARS	83	93.080	Erinaceus_europaeus
ENSMLEG00000039307	VARS	100	64.379	ENSELUG00000006550	vars	97	64.181	Esox_lucius
ENSMLEG00000039307	VARS	100	94.699	ENSFCAG00000004510	VARS	100	94.699	Felis_catus
ENSMLEG00000039307	VARS	82	91.546	ENSFDAG00000011401	VARS	100	91.546	Fukomys_damarensis
ENSMLEG00000039307	VARS	100	65.346	ENSFHEG00000010672	vars	100	65.194	Fundulus_heteroclitus
ENSMLEG00000039307	VARS	92	66.140	ENSGMOG00000014908	vars	97	66.223	Gadus_morhua
ENSMLEG00000039307	VARS	100	65.603	ENSGAFG00000021630	vars	100	65.579	Gambusia_affinis
ENSMLEG00000039307	VARS	92	66.416	ENSGACG00000009601	vars	98	66.250	Gasterosteus_aculeatus
ENSMLEG00000039307	VARS	50	64.826	ENSGAGG00000006508	-	91	64.196	Gopherus_agassizii
ENSMLEG00000039307	VARS	100	98.813	ENSGGOG00000011364	VARS	100	98.813	Gorilla_gorilla
ENSMLEG00000039307	VARS	100	64.961	ENSHBUG00000017151	vars	97	64.651	Haplochromis_burtoni
ENSMLEG00000039307	VARS	100	90.585	ENSHGLG00000011646	VARS	100	90.269	Heterocephalus_glaber_female
ENSMLEG00000039307	VARS	93	82.973	ENSHGLG00100018062	VARS	100	82.890	Heterocephalus_glaber_male
ENSMLEG00000039307	VARS	99	64.496	ENSHCOG00000012198	vars	99	64.747	Hippocampus_comes
ENSMLEG00000039307	VARS	100	65.447	ENSIPUG00000005218	vars	100	65.447	Ictalurus_punctatus
ENSMLEG00000039307	VARS	100	94.545	ENSSTOG00000013112	VARS	100	94.545	Ictidomys_tridecemlineatus
ENSMLEG00000039307	VARS	100	91.297	ENSJJAG00000019749	-	100	91.297	Jaculus_jaculus
ENSMLEG00000039307	VARS	100	72.152	ENSJJAG00000015343	-	100	72.627	Jaculus_jaculus
ENSMLEG00000039307	VARS	100	65.166	ENSKMAG00000009455	vars	100	65.008	Kryptolebias_marmoratus
ENSMLEG00000039307	VARS	100	63.794	ENSLBEG00000010341	vars	100	64.511	Labrus_bergylta
ENSMLEG00000039307	VARS	94	62.366	ENSLACG00000015232	VARS	99	62.787	Latimeria_chalumnae
ENSMLEG00000039307	VARS	100	67.109	ENSLOCG00000004240	vars	100	67.109	Lepisosteus_oculatus
ENSMLEG00000039307	VARS	100	93.513	ENSLAFG00000023090	VARS	100	93.987	Loxodonta_africana
ENSMLEG00000039307	VARS	100	99.604	ENSMFAG00000001032	VARS	100	99.604	Macaca_fascicularis
ENSMLEG00000039307	VARS	100	99.604	ENSMMUG00000006828	VARS	100	99.604	Macaca_mulatta
ENSMLEG00000039307	VARS	100	99.604	ENSMNEG00000042072	VARS	100	99.604	Macaca_nemestrina
ENSMLEG00000039307	VARS	100	64.646	ENSMAMG00000003949	vars	100	64.977	Mastacembelus_armatus
ENSMLEG00000039307	VARS	100	65.039	ENSMZEG00005018327	vars	100	64.562	Maylandia_zebra
ENSMLEG00000039307	VARS	100	92.484	ENSMAUG00000006715	Vars	100	92.484	Mesocricetus_auratus
ENSMLEG00000039307	VARS	100	94.858	ENSMICG00000003548	VARS	100	95.771	Microcebus_murinus
ENSMLEG00000039307	VARS	100	89.873	ENSMOCG00000015404	Vars	100	90.348	Microtus_ochrogaster
ENSMLEG00000039307	VARS	100	64.443	ENSMMOG00000015801	vars	100	64.443	Mola_mola
ENSMLEG00000039307	VARS	100	86.788	ENSMODG00000015204	-	100	86.788	Monodelphis_domestica
ENSMLEG00000039307	VARS	99	64.933	ENSMALG00000022532	vars	99	64.465	Monopterus_albus
ENSMLEG00000039307	VARS	100	93.275	MGP_CAROLIEiJ_G0021491	Vars	100	93.671	Mus_caroli
ENSMLEG00000039307	VARS	100	93.275	ENSMUSG00000007029	Vars	100	93.671	Mus_musculus
ENSMLEG00000039307	VARS	100	92.801	MGP_PahariEiJ_G0020486	Vars	100	93.196	Mus_pahari
ENSMLEG00000039307	VARS	100	93.354	MGP_SPRETEiJ_G0022396	Vars	100	93.750	Mus_spretus
ENSMLEG00000039307	VARS	100	94.937	ENSMPUG00000010821	VARS	100	94.937	Mustela_putorius_furo
ENSMLEG00000039307	VARS	78	93.320	ENSMLUG00000013126	VARS	100	93.320	Myotis_lucifugus
ENSMLEG00000039307	VARS	100	92.247	ENSNGAG00000012151	Vars	100	92.247	Nannospalax_galili
ENSMLEG00000039307	VARS	100	64.729	ENSNBRG00000020520	vars	100	64.419	Neolamprologus_brichardi
ENSMLEG00000039307	VARS	100	97.943	ENSNLEG00000006351	VARS	100	97.943	Nomascus_leucogenys
ENSMLEG00000039307	VARS	100	83.228	ENSMEUG00000011378	VARS	100	83.228	Notamacropus_eugenii
ENSMLEG00000039307	VARS	100	93.987	ENSOPRG00000003607	VARS	100	93.987	Ochotona_princeps
ENSMLEG00000039307	VARS	100	91.139	ENSODEG00000017681	VARS	100	91.139	Octodon_degus
ENSMLEG00000039307	VARS	100	65.598	ENSONIG00000013064	vars	99	67.910	Oreochromis_niloticus
ENSMLEG00000039307	VARS	77	78.385	ENSOANG00000005400	VARS	98	77.910	Ornithorhynchus_anatinus
ENSMLEG00000039307	VARS	100	92.168	ENSOCUG00000022463	VARS	100	91.956	Oryctolagus_cuniculus
ENSMLEG00000039307	VARS	100	64.450	ENSORLG00000013063	vars	100	64.598	Oryzias_latipes
ENSMLEG00000039307	VARS	100	65.150	ENSORLG00020003504	vars	100	65.127	Oryzias_latipes_hni
ENSMLEG00000039307	VARS	100	65.046	ENSORLG00015009001	vars	100	65.023	Oryzias_latipes_hsok
ENSMLEG00000039307	VARS	100	64.892	ENSOMEG00000015016	vars	100	64.869	Oryzias_melastigma
ENSMLEG00000039307	VARS	100	95.016	ENSOGAG00000007515	VARS	100	95.016	Otolemur_garnettii
ENSMLEG00000039307	VARS	100	98.972	ENSPPAG00000034012	VARS	100	98.972	Pan_paniscus
ENSMLEG00000039307	VARS	100	94.858	ENSPPRG00000014855	VARS	100	94.858	Panthera_pardus
ENSMLEG00000039307	VARS	85	94.796	ENSPTIG00000010462	VARS	95	94.780	Panthera_tigris_altaica
ENSMLEG00000039307	VARS	100	98.892	ENSPTRG00000017985	VARS	100	98.892	Pan_troglodytes
ENSMLEG00000039307	VARS	100	97.950	ENSPANG00000014565	VARS	100	97.950	Papio_anubis
ENSMLEG00000039307	VARS	100	64.015	ENSPKIG00000016304	vars	100	64.170	Paramormyrops_kingsleyae
ENSMLEG00000039307	VARS	100	65.563	ENSPMGG00000023909	vars	100	65.642	Periophthalmus_magnuspinnatus
ENSMLEG00000039307	VARS	100	93.750	ENSPEMG00000006639	Vars	100	93.750	Peromyscus_maniculatus_bairdii
ENSMLEG00000039307	VARS	100	86.313	ENSPCIG00000018553	VARS	100	86.313	Phascolarctos_cinereus
ENSMLEG00000039307	VARS	100	65.759	ENSPFOG00000015690	vars	100	65.734	Poecilia_formosa
ENSMLEG00000039307	VARS	100	66.247	ENSPLAG00000009590	vars	100	66.247	Poecilia_latipinna
ENSMLEG00000039307	VARS	100	65.759	ENSPMEG00000004708	vars	100	65.734	Poecilia_mexicana
ENSMLEG00000039307	VARS	100	64.201	ENSPREG00000013264	vars	100	63.636	Poecilia_reticulata
ENSMLEG00000039307	VARS	100	97.073	ENSPPYG00000016460	VARS	100	97.073	Pongo_abelii
ENSMLEG00000039307	VARS	86	92.280	ENSPCAG00000013565	VARS	86	92.280	Procavia_capensis
ENSMLEG00000039307	VARS	100	95.099	ENSPCOG00000010942	VARS	100	95.573	Propithecus_coquereli
ENSMLEG00000039307	VARS	100	91.377	ENSPVAG00000012403	VARS	100	91.377	Pteropus_vampyrus
ENSMLEG00000039307	VARS	100	64.961	ENSPNYG00000022511	vars	100	64.651	Pundamilia_nyererei
ENSMLEG00000039307	VARS	100	64.856	ENSPNAG00000020962	vars	100	64.624	Pygocentrus_nattereri
ENSMLEG00000039307	VARS	100	93.592	ENSRNOG00000000867	Vars	100	93.592	Rattus_norvegicus
ENSMLEG00000039307	VARS	100	99.446	ENSRBIG00000041669	VARS	100	99.446	Rhinopithecus_bieti
ENSMLEG00000039307	VARS	100	99.446	ENSRROG00000045490	VARS	100	99.446	Rhinopithecus_roxellana
ENSMLEG00000039307	VARS	100	96.915	ENSSBOG00000035402	VARS	100	96.915	Saimiri_boliviensis_boliviensis
ENSMLEG00000039307	VARS	100	81.775	ENSSHAG00000006937	VARS	100	82.011	Sarcophilus_harrisii
ENSMLEG00000039307	VARS	100	64.710	ENSSFOG00015014272	vars	100	64.788	Scleropages_formosus
ENSMLEG00000039307	VARS	100	63.777	ENSSMAG00000009596	vars	99	63.517	Scophthalmus_maximus
ENSMLEG00000039307	VARS	100	64.628	ENSSDUG00000014177	vars	100	64.396	Seriola_dumerili
ENSMLEG00000039307	VARS	100	64.551	ENSSLDG00000025316	vars	100	64.241	Seriola_lalandi_dorsalis
ENSMLEG00000039307	VARS	100	65.087	ENSSPAG00000017068	vars	100	65.187	Stegastes_partitus
ENSMLEG00000039307	VARS	100	93.043	ENSSSCG00000038950	VARS	100	93.518	Sus_scrofa
ENSMLEG00000039307	VARS	82	64.430	ENSTRUG00000012307	vars	98	64.279	Takifugu_rubripes
ENSMLEG00000039307	VARS	100	65.364	ENSTNIG00000008011	vars	100	65.361	Tetraodon_nigroviridis
ENSMLEG00000039307	VARS	54	94.595	ENSTBEG00000004728	-	60	94.595	Tupaia_belangeri
ENSMLEG00000039307	VARS	100	85.918	ENSTTRG00000014128	VARS	100	85.918	Tursiops_truncatus
ENSMLEG00000039307	VARS	100	91.352	ENSUAMG00000010424	VARS	100	91.352	Ursus_americanus
ENSMLEG00000039307	VARS	93	94.603	ENSUMAG00000013486	VARS	98	94.762	Ursus_maritimus
ENSMLEG00000039307	VARS	100	94.229	ENSVVUG00000021323	VARS	100	94.308	Vulpes_vulpes
ENSMLEG00000039307	VARS	96	63.137	ENSXETG00000024076	vars	98	62.945	Xenopus_tropicalis
ENSMLEG00000039307	VARS	100	65.827	ENSXCOG00000019172	vars	100	65.802	Xiphophorus_couchianus
ENSMLEG00000039307	VARS	100	65.525	ENSXMAG00000010927	vars	100	65.501	Xiphophorus_maculatus