EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000039324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 292 bases
Position: chrKN979131.1:185600-185891
Accession: 105529570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000030234	LSM	PF01423.22	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000053796	-	267	XM_011966738	ENSMLEP00000030234	88 (aa)	XP_011822128	A0A2K5ZQZ8

Gene Model

Click here to download ENSMLEG00000039324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000039324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000039324	-	100	84.375	ENSMLEG00000035828	-	100	84.375
ENSMLEG00000039324	-	91	32.184	ENSMLEG00000034535	LSM1	65	32.184
ENSMLEG00000039324	-	70	35.135	ENSMLEG00000030852	LSM7	73	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000039324	-	100	84.375	ENSG00000128534	LSM8	100	84.375	Homo_sapiens
ENSMLEG00000039324	-	100	78.125	ENSAPOG00000008649	lsm8	100	78.125	Acanthochromis_polyacanthus
ENSMLEG00000039324	-	100	84.375	ENSAMEG00000001162	LSM8	100	84.375	Ailuropoda_melanoleuca
ENSMLEG00000039324	-	76	81.333	ENSACIG00000014694	lsm8	100	81.333	Amphilophus_citrinellus
ENSMLEG00000039324	-	100	78.125	ENSAOCG00000013926	lsm8	100	78.125	Amphiprion_ocellaris
ENSMLEG00000039324	-	100	78.125	ENSAPEG00000023502	lsm8	100	78.125	Amphiprion_percula
ENSMLEG00000039324	-	76	81.333	ENSATEG00000023432	lsm8	100	81.333	Anabas_testudineus
ENSMLEG00000039324	-	94	76.596	ENSAPLG00000005115	LSM8	95	76.596	Anas_platyrhynchos
ENSMLEG00000039324	-	100	84.375	ENSANAG00000027771	LSM8	100	84.375	Aotus_nancymaae
ENSMLEG00000039324	-	100	78.125	ENSACLG00000011253	lsm8	100	78.125	Astatotilapia_calliptera
ENSMLEG00000039324	-	100	79.167	ENSAMXG00000042902	lsm8	100	79.167	Astyanax_mexicanus
ENSMLEG00000039324	-	100	84.375	ENSBTAG00000012649	LSM8	100	84.375	Bos_taurus
ENSMLEG00000039324	-	98	54.255	WBGene00003082	lsm-8	96	54.255	Caenorhabditis_elegans
ENSMLEG00000039324	-	100	84.375	ENSCJAG00000046406	LSM8	100	84.375	Callithrix_jacchus
ENSMLEG00000039324	-	99	84.211	ENSCAFG00000016459	LSM8	96	84.211	Canis_familiaris
ENSMLEG00000039324	-	88	83.529	ENSCAFG00020012800	-	66	83.529	Canis_lupus_dingo
ENSMLEG00000039324	-	100	84.375	ENSCAFG00020007643	-	100	84.375	Canis_lupus_dingo
ENSMLEG00000039324	-	88	83.529	ENSCHIG00000014201	LSM8	90	83.529	Capra_hircus
ENSMLEG00000039324	-	100	84.375	ENSTSYG00000032434	LSM8	100	84.375	Carlito_syrichta
ENSMLEG00000039324	-	75	81.081	ENSCAPG00000008253	LSM8	100	81.081	Cavia_aperea
ENSMLEG00000039324	-	100	84.375	ENSCPOG00000035673	LSM8	100	84.375	Cavia_porcellus
ENSMLEG00000039324	-	100	84.375	ENSCCAG00000021329	LSM8	100	84.375	Cebus_capucinus
ENSMLEG00000039324	-	100	84.375	ENSCATG00000045302	LSM8	100	84.375	Cercocebus_atys
ENSMLEG00000039324	-	100	84.375	ENSCLAG00000003726	LSM8	100	84.375	Chinchilla_lanigera
ENSMLEG00000039324	-	100	84.375	ENSCSAG00000010802	-	100	84.375	Chlorocebus_sabaeus
ENSMLEG00000039324	-	100	85.417	ENSCSAG00000019007	-	100	85.417	Chlorocebus_sabaeus
ENSMLEG00000039324	-	88	83.529	ENSCPBG00000008154	LSM8	87	83.529	Chrysemys_picta_bellii
ENSMLEG00000039324	-	100	63.542	ENSCING00000024877	-	100	63.542	Ciona_intestinalis
ENSMLEG00000039324	-	100	84.375	ENSCANG00000040728	LSM8	100	84.375	Colobus_angolensis_palliatus
ENSMLEG00000039324	-	100	84.375	ENSCGRG00001000450	Lsm8	100	84.375	Cricetulus_griseus_chok1gshd
ENSMLEG00000039324	-	88	83.529	ENSCGRG00000005587	Lsm8	100	83.529	Cricetulus_griseus_crigri
ENSMLEG00000039324	-	100	68.750	ENSCSEG00000004164	lsm8	100	68.750	Cynoglossus_semilaevis
ENSMLEG00000039324	-	100	78.125	ENSCVAG00000020547	lsm8	100	78.125	Cyprinodon_variegatus
ENSMLEG00000039324	-	100	76.042	ENSDARG00000091656	lsm8	100	76.042	Danio_rerio
ENSMLEG00000039324	-	100	84.375	ENSDNOG00000034613	LSM8	100	84.375	Dasypus_novemcinctus
ENSMLEG00000039324	-	100	84.375	ENSDORG00000027868	Lsm8	100	84.375	Dipodomys_ordii
ENSMLEG00000039324	-	98	60.638	FBgn0035271	CG2021	99	60.638	Drosophila_melanogaster
ENSMLEG00000039324	-	100	83.333	ENSETEG00000011594	LSM8	100	83.333	Echinops_telfairi
ENSMLEG00000039324	-	75	77.027	ENSEBUG00000012017	lsm8	100	77.027	Eptatretus_burgeri
ENSMLEG00000039324	-	100	84.375	ENSEASG00005008932	LSM8	62	84.375	Equus_asinus_asinus
ENSMLEG00000039324	-	88	83.529	ENSECAG00000024025	LSM8	77	83.529	Equus_caballus
ENSMLEG00000039324	-	100	79.167	ENSELUG00000010138	lsm8	100	79.167	Esox_lucius
ENSMLEG00000039324	-	100	84.375	ENSFCAG00000036620	-	100	84.375	Felis_catus
ENSMLEG00000039324	-	84	81.081	ENSFCAG00000044794	-	83	81.081	Felis_catus
ENSMLEG00000039324	-	100	83.333	ENSFALG00000010023	LSM8	100	83.333	Ficedula_albicollis
ENSMLEG00000039324	-	100	84.375	ENSFDAG00000019530	LSM8	100	84.375	Fukomys_damarensis
ENSMLEG00000039324	-	100	78.125	ENSFHEG00000013729	lsm8	100	78.125	Fundulus_heteroclitus
ENSMLEG00000039324	-	100	83.333	ENSGALG00000009110	LSM8	100	83.333	Gallus_gallus
ENSMLEG00000039324	-	100	78.125	ENSGAFG00000001135	lsm8	100	78.125	Gambusia_affinis
ENSMLEG00000039324	-	100	84.375	ENSGAGG00000017366	LSM8	100	84.375	Gopherus_agassizii
ENSMLEG00000039324	-	100	84.375	ENSGGOG00000041883	LSM8	100	84.375	Gorilla_gorilla
ENSMLEG00000039324	-	100	78.125	ENSHBUG00000003646	lsm8	100	78.125	Haplochromis_burtoni
ENSMLEG00000039324	-	100	80.208	ENSHGLG00000019782	-	100	80.208	Heterocephalus_glaber_female
ENSMLEG00000039324	-	68	82.353	ENSHGLG00000001988	-	99	82.353	Heterocephalus_glaber_female
ENSMLEG00000039324	-	99	81.053	ENSHGLG00100003934	-	95	81.053	Heterocephalus_glaber_male
ENSMLEG00000039324	-	100	80.208	ENSHGLG00100012166	-	100	80.208	Heterocephalus_glaber_male
ENSMLEG00000039324	-	100	78.125	ENSHCOG00000005037	lsm8	100	78.125	Hippocampus_comes
ENSMLEG00000039324	-	100	79.167	ENSIPUG00000019811	NAA38	100	79.167	Ictalurus_punctatus
ENSMLEG00000039324	-	100	84.375	ENSSTOG00000009039	LSM8	100	84.375	Ictidomys_tridecemlineatus
ENSMLEG00000039324	-	91	72.727	ENSSTOG00000034801	-	81	72.727	Ictidomys_tridecemlineatus
ENSMLEG00000039324	-	100	84.375	ENSJJAG00000009031	Lsm8	99	84.375	Jaculus_jaculus
ENSMLEG00000039324	-	100	78.125	ENSKMAG00000018983	lsm8	100	78.125	Kryptolebias_marmoratus
ENSMLEG00000039324	-	100	80.208	ENSLACG00000010231	LSM8	100	80.208	Latimeria_chalumnae
ENSMLEG00000039324	-	100	79.167	ENSLOCG00000015580	lsm8	100	79.167	Lepisosteus_oculatus
ENSMLEG00000039324	-	100	83.505	ENSLAFG00000011242	LSM8	100	83.505	Loxodonta_africana
ENSMLEG00000039324	-	100	84.375	ENSMFAG00000035798	LSM8	100	84.375	Macaca_fascicularis
ENSMLEG00000039324	-	100	85.417	ENSMFAG00000013044	-	100	85.417	Macaca_fascicularis
ENSMLEG00000039324	-	100	84.375	ENSMMUG00000046401	LSM8	100	81.081	Macaca_mulatta
ENSMLEG00000039324	-	100	84.375	ENSMNEG00000036764	-	100	84.375	Macaca_nemestrina
ENSMLEG00000039324	-	76	82.667	ENSMNEG00000011141	-	100	82.667	Macaca_nemestrina
ENSMLEG00000039324	-	76	81.333	ENSMAMG00000018839	lsm8	100	81.333	Mastacembelus_armatus
ENSMLEG00000039324	-	100	78.125	ENSMZEG00005019138	lsm8	100	78.125	Maylandia_zebra
ENSMLEG00000039324	-	100	83.333	ENSMGAG00000008808	LSM8	100	83.333	Meleagris_gallopavo
ENSMLEG00000039324	-	100	80.682	ENSMAUG00000015356	-	100	80.682	Mesocricetus_auratus
ENSMLEG00000039324	-	100	79.167	ENSMAUG00000015721	-	100	79.167	Mesocricetus_auratus
ENSMLEG00000039324	-	77	73.684	ENSMAUG00000020287	-	100	75.676	Mesocricetus_auratus
ENSMLEG00000039324	-	100	84.375	ENSMICG00000042730	LSM8	100	84.375	Microcebus_murinus
ENSMLEG00000039324	-	100	84.375	ENSMOCG00000001688	Lsm8	100	84.375	Microtus_ochrogaster
ENSMLEG00000039324	-	76	81.333	ENSMMOG00000006046	lsm8	100	81.333	Mola_mola
ENSMLEG00000039324	-	74	72.000	ENSMODG00000015729	LSM8	96	72.000	Monodelphis_domestica
ENSMLEG00000039324	-	100	79.167	ENSMALG00000000405	lsm8	100	79.167	Monopterus_albus
ENSMLEG00000039324	-	100	84.375	MGP_CAROLIEiJ_G0028125	-	100	84.375	Mus_caroli
ENSMLEG00000039324	-	100	84.375	ENSMUSG00000044155	Lsm8	100	84.375	Mus_musculus
ENSMLEG00000039324	-	100	84.375	MGP_PahariEiJ_G0021881	Lsm8	100	84.375	Mus_pahari
ENSMLEG00000039324	-	100	84.375	MGP_SPRETEiJ_G0029125	-	100	84.375	Mus_spretus
ENSMLEG00000039324	-	100	84.375	ENSMLUG00000006837	-	100	84.375	Myotis_lucifugus
ENSMLEG00000039324	-	100	83.333	ENSMLUG00000027762	-	100	83.333	Myotis_lucifugus
ENSMLEG00000039324	-	100	84.375	ENSNGAG00000016554	Lsm8	100	84.375	Nannospalax_galili
ENSMLEG00000039324	-	100	78.125	ENSNBRG00000014441	lsm8	100	78.125	Neolamprologus_brichardi
ENSMLEG00000039324	-	100	84.375	ENSNLEG00000011768	LSM8	100	84.375	Nomascus_leucogenys
ENSMLEG00000039324	-	100	73.958	ENSMEUG00000007801	LSM8	100	73.958	Notamacropus_eugenii
ENSMLEG00000039324	-	88	83.529	ENSOPRG00000014809	LSM8	100	83.529	Ochotona_princeps
ENSMLEG00000039324	-	100	84.375	ENSODEG00000000418	-	100	84.375	Octodon_degus
ENSMLEG00000039324	-	89	68.605	ENSODEG00000020290	-	100	68.605	Octodon_degus
ENSMLEG00000039324	-	100	83.333	ENSOANG00000014536	LSM8	100	83.333	Ornithorhynchus_anatinus
ENSMLEG00000039324	-	100	83.505	ENSOCUG00000017359	LSM8	100	83.505	Oryctolagus_cuniculus
ENSMLEG00000039324	-	100	68.750	ENSORLG00000017432	lsm8	100	68.750	Oryzias_latipes
ENSMLEG00000039324	-	100	68.750	ENSORLG00020004376	lsm8	100	68.750	Oryzias_latipes_hni
ENSMLEG00000039324	-	100	78.125	ENSORLG00015003757	lsm8	100	78.125	Oryzias_latipes_hsok
ENSMLEG00000039324	-	100	68.750	ENSOMEG00000022509	lsm8	100	68.750	Oryzias_melastigma
ENSMLEG00000039324	-	100	84.375	ENSOGAG00000013377	LSM8	100	84.375	Otolemur_garnettii
ENSMLEG00000039324	-	100	84.375	ENSOARG00000017974	LSM8	100	84.375	Ovis_aries
ENSMLEG00000039324	-	76	82.667	ENSPPAG00000043228	-	100	82.667	Pan_paniscus
ENSMLEG00000039324	-	100	84.375	ENSPPRG00000006444	LSM8	100	84.375	Panthera_pardus
ENSMLEG00000039324	-	100	84.375	ENSPTIG00000004722	LSM8	100	84.375	Panthera_tigris_altaica
ENSMLEG00000039324	-	76	82.667	ENSPTRG00000046596	-	100	82.667	Pan_troglodytes
ENSMLEG00000039324	-	100	84.375	ENSPANG00000019395	-	100	84.375	Papio_anubis
ENSMLEG00000039324	-	100	84.375	ENSPANG00000035470	-	100	84.375	Papio_anubis
ENSMLEG00000039324	-	88	82.353	ENSPKIG00000006092	lsm8	86	82.353	Paramormyrops_kingsleyae
ENSMLEG00000039324	-	76	82.667	ENSPSIG00000017054	LSM8	100	82.667	Pelodiscus_sinensis
ENSMLEG00000039324	-	76	81.333	ENSPMGG00000016442	lsm8	100	81.333	Periophthalmus_magnuspinnatus
ENSMLEG00000039324	-	75	81.081	ENSPEMG00000009153	Lsm8	100	81.081	Peromyscus_maniculatus_bairdii
ENSMLEG00000039324	-	97	84.946	ENSPCIG00000021467	LSM8	98	84.946	Phascolarctos_cinereus
ENSMLEG00000039324	-	100	78.125	ENSPFOG00000012340	lsm8	100	78.125	Poecilia_formosa
ENSMLEG00000039324	-	100	72.917	ENSPLAG00000000516	lsm8	100	72.917	Poecilia_latipinna
ENSMLEG00000039324	-	100	78.125	ENSPMEG00000022567	lsm8	100	78.125	Poecilia_mexicana
ENSMLEG00000039324	-	74	72.500	ENSPREG00000005527	lsm8	72	72.500	Poecilia_reticulata
ENSMLEG00000039324	-	100	84.375	ENSPPYG00000017942	LSM8	100	84.375	Pongo_abelii
ENSMLEG00000039324	-	100	84.375	ENSPCOG00000003309	-	100	84.375	Propithecus_coquereli
ENSMLEG00000039324	-	99	66.667	ENSPCOG00000017982	-	99	66.667	Propithecus_coquereli
ENSMLEG00000039324	-	88	83.529	ENSPVAG00000000990	LSM8	100	83.529	Pteropus_vampyrus
ENSMLEG00000039324	-	100	78.125	ENSPNYG00000011448	lsm8	100	78.125	Pundamilia_nyererei
ENSMLEG00000039324	-	100	79.167	ENSPNAG00000010252	lsm8	100	79.167	Pygocentrus_nattereri
ENSMLEG00000039324	-	100	84.375	ENSRNOG00000058677	Lsm8	100	84.375	Rattus_norvegicus
ENSMLEG00000039324	-	100	84.375	ENSRBIG00000032851	LSM8	100	84.375	Rhinopithecus_bieti
ENSMLEG00000039324	-	100	84.375	ENSRROG00000039618	LSM8	100	84.375	Rhinopithecus_roxellana
ENSMLEG00000039324	-	100	84.375	ENSSBOG00000023223	LSM8	100	84.375	Saimiri_boliviensis_boliviensis
ENSMLEG00000039324	-	100	84.375	ENSSHAG00000018435	-	100	84.375	Sarcophilus_harrisii
ENSMLEG00000039324	-	100	77.083	ENSSFOG00015004412	lsm8	100	77.083	Scleropages_formosus
ENSMLEG00000039324	-	76	81.333	ENSSMAG00000009458	lsm8	100	81.333	Scophthalmus_maximus
ENSMLEG00000039324	-	100	78.125	ENSSDUG00000014702	lsm8	100	78.125	Seriola_dumerili
ENSMLEG00000039324	-	76	81.333	ENSSLDG00000016870	lsm8	100	81.333	Seriola_lalandi_dorsalis
ENSMLEG00000039324	-	73	83.333	ENSSARG00000009628	-	100	83.333	Sorex_araneus
ENSMLEG00000039324	-	100	84.375	ENSSPUG00000017419	LSM8	100	84.375	Sphenodon_punctatus
ENSMLEG00000039324	-	100	78.125	ENSSPAG00000021422	lsm8	100	78.125	Stegastes_partitus
ENSMLEG00000039324	-	100	84.375	ENSSSCG00000021652	LSM8	100	84.375	Sus_scrofa
ENSMLEG00000039324	-	100	81.250	ENSTGUG00000016823	-	100	81.250	Taeniopygia_guttata
ENSMLEG00000039324	-	100	82.292	ENSTGUG00000004730	-	100	82.292	Taeniopygia_guttata
ENSMLEG00000039324	-	100	78.125	ENSTRUG00000025192	lsm8	100	78.125	Takifugu_rubripes
ENSMLEG00000039324	-	100	78.125	ENSTNIG00000002864	lsm8	100	78.125	Tetraodon_nigroviridis
ENSMLEG00000039324	-	100	84.375	ENSTTRG00000001023	LSM8	100	84.375	Tursiops_truncatus
ENSMLEG00000039324	-	91	81.818	ENSUAMG00000006943	-	92	81.818	Ursus_americanus
ENSMLEG00000039324	-	91	81.818	ENSUMAG00000003073	LSM8	94	81.818	Ursus_maritimus
ENSMLEG00000039324	-	100	84.375	ENSVPAG00000001530	LSM8	100	84.375	Vicugna_pacos
ENSMLEG00000039324	-	76	80.000	ENSVVUG00000013248	-	82	80.000	Vulpes_vulpes
ENSMLEG00000039324	-	92	79.775	ENSXETG00000021829	lsm8	92	79.775	Xenopus_tropicalis
ENSMLEG00000039324	-	100	76.042	ENSXCOG00000012938	lsm8	100	76.042	Xiphophorus_couchianus
ENSMLEG00000039324	-	100	78.125	ENSXMAG00000025919	lsm8	100	78.125	Xiphophorus_maculatus