EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000039674 (Gene tree)
Gene ID: 105545974
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 36048 bases
Position: chrKN975681.1:1464133-1500180
Accession: 105545974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000031105	RRM_1	PF00076.22	3.7e-09	1	1
ENSMLEP00000031103	RRM_1	PF00076.22	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000054667	SCAF4-201	3426	XM_011989051	ENSMLEP00000031103	1141 (aa)	XP_011844441	A0A2K5ZTJ2
ENSMLET00000054671	SCAF4-202	3381	-	ENSMLEP00000031105	1126 (aa)	-	A0A2K5ZTG2

Gene Model

Click here to download ENSMLEG00000039674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000039674's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000039674	SCAF4	100	98.338	ENSG00000156304	SCAF4	99	98.338	Homo_sapiens
ENSMLEG00000039674	SCAF4	78	52.216	ENSAPOG00000002946	scaf4a	54	58.615	Acanthochromis_polyacanthus
ENSMLEG00000039674	SCAF4	51	59.848	ENSAPOG00000019615	scaf4b	62	59.848	Acanthochromis_polyacanthus
ENSMLEG00000039674	SCAF4	74	93.190	ENSAMEG00000014987	SCAF4	96	93.190	Ailuropoda_melanoleuca
ENSMLEG00000039674	SCAF4	78	53.081	ENSAOCG00000000615	scaf4a	54	58.308	Amphiprion_ocellaris
ENSMLEG00000039674	SCAF4	68	56.183	ENSAPEG00000021229	scaf4a	54	58.154	Amphiprion_percula
ENSMLEG00000039674	SCAF4	100	75.304	ENSAPLG00000002509	SCAF4	59	83.746	Anas_platyrhynchos
ENSMLEG00000039674	SCAF4	96	69.838	ENSACAG00000002569	SCAF4	51	84.146	Anolis_carolinensis
ENSMLEG00000039674	SCAF4	100	97.988	ENSANAG00000037494	SCAF4	99	97.988	Aotus_nancymaae
ENSMLEG00000039674	SCAF4	93	48.873	ENSAMXG00000008585	scaf4a	59	62.043	Astyanax_mexicanus
ENSMLEG00000039674	SCAF4	100	92.140	ENSBTAG00000018855	SCAF4	99	91.354	Bos_taurus
ENSMLEG00000039674	SCAF4	100	97.900	ENSCJAG00000008993	SCAF4	99	98.180	Callithrix_jacchus
ENSMLEG00000039674	SCAF4	100	93.351	ENSCAFG00000008863	SCAF4	99	93.001	Canis_familiaris
ENSMLEG00000039674	SCAF4	99	90.781	ENSCAFG00020026019	SCAF4	100	92.157	Canis_lupus_dingo
ENSMLEG00000039674	SCAF4	100	91.036	ENSCHIG00000008385	SCAF4	99	91.036	Capra_hircus
ENSMLEG00000039674	SCAF4	91	95.800	ENSTSYG00000011344	SCAF4	99	95.800	Carlito_syrichta
ENSMLEG00000039674	SCAF4	100	89.574	ENSCPOG00000012443	SCAF4	99	89.401	Cavia_porcellus
ENSMLEG00000039674	SCAF4	100	97.550	ENSCCAG00000033727	SCAF4	99	97.550	Cebus_capucinus
ENSMLEG00000039674	SCAF4	100	99.301	ENSCATG00000030379	SCAF4	100	99.298	Cercocebus_atys
ENSMLEG00000039674	SCAF4	99	91.667	ENSCLAG00000006298	SCAF4	100	91.753	Chinchilla_lanigera
ENSMLEG00000039674	SCAF4	100	98.864	ENSCSAG00000009438	SCAF4	99	98.864	Chlorocebus_sabaeus
ENSMLEG00000039674	SCAF4	100	98.775	ENSCANG00000029847	SCAF4	99	98.775	Colobus_angolensis_palliatus
ENSMLEG00000039674	SCAF4	69	90.347	ENSCGRG00001020821	Scaf4	99	82.591	Cricetulus_griseus_chok1gshd
ENSMLEG00000039674	SCAF4	69	89.770	ENSCGRG00000014360	Scaf4	69	85.731	Cricetulus_griseus_crigri
ENSMLEG00000039674	SCAF4	78	52.309	ENSCSEG00000019549	scaf4a	52	55.023	Cynoglossus_semilaevis
ENSMLEG00000039674	SCAF4	57	56.877	ENSCSEG00000012808	-	60	61.244	Cynoglossus_semilaevis
ENSMLEG00000039674	SCAF4	100	90.114	ENSDNOG00000019014	SCAF4	94	89.676	Dasypus_novemcinctus
ENSMLEG00000039674	SCAF4	92	96.552	ENSETEG00000000583	SCAF4	93	96.552	Echinops_telfairi
ENSMLEG00000039674	SCAF4	100	93.526	ENSEASG00005007756	SCAF4	99	93.438	Equus_asinus_asinus
ENSMLEG00000039674	SCAF4	100	93.526	ENSECAG00000014248	SCAF4	99	93.263	Equus_caballus
ENSMLEG00000039674	SCAF4	58	52.098	ENSELUG00000002779	SCAF8	59	68.116	Esox_lucius
ENSMLEG00000039674	SCAF4	100	92.422	ENSFCAG00000002228	SCAF4	99	92.247	Felis_catus
ENSMLEG00000039674	SCAF4	99	88.937	ENSFDAG00000017780	SCAF4	100	89.022	Fukomys_damarensis
ENSMLEG00000039674	SCAF4	100	76.087	ENSGALG00000033965	SCAF4	58	83.282	Gallus_gallus
ENSMLEG00000039674	SCAF4	91	95.666	ENSGGOG00000015557	SCAF4	99	98.762	Gorilla_gorilla
ENSMLEG00000039674	SCAF4	100	90.138	ENSHGLG00000010582	SCAF4	99	90.830	Heterocephalus_glaber_female
ENSMLEG00000039674	SCAF4	99	90.104	ENSHGLG00100009441	SCAF4	100	90.799	Heterocephalus_glaber_male
ENSMLEG00000039674	SCAF4	68	49.770	ENSIPUG00000011285	scaf4	62	62.290	Ictalurus_punctatus
ENSMLEG00000039674	SCAF4	99	87.168	ENSSTOG00000004450	SCAF4	100	87.434	Ictidomys_tridecemlineatus
ENSMLEG00000039674	SCAF4	100	88.734	ENSJJAG00000019447	Scaf4	99	88.821	Jaculus_jaculus
ENSMLEG00000039674	SCAF4	98	59.773	ENSLACG00000013913	SCAF4	59	69.279	Latimeria_chalumnae
ENSMLEG00000039674	SCAF4	95	56.575	ENSLOCG00000009162	scaf4a	58	66.717	Lepisosteus_oculatus
ENSMLEG00000039674	SCAF4	100	92.049	ENSLAFG00000010710	SCAF4	99	91.608	Loxodonta_africana
ENSMLEG00000039674	SCAF4	100	99.650	ENSMFAG00000037668	SCAF4	99	99.650	Macaca_fascicularis
ENSMLEG00000039674	SCAF4	100	99.563	ENSMMUG00000001712	SCAF4	99	99.563	Macaca_mulatta
ENSMLEG00000039674	SCAF4	100	99.476	ENSMNEG00000032966	SCAF4	99	99.476	Macaca_nemestrina
ENSMLEG00000039674	SCAF4	100	76.021	ENSMGAG00000014515	SCAF4	59	83.437	Meleagris_gallopavo
ENSMLEG00000039674	SCAF4	99	88.519	ENSMAUG00000013307	Scaf4	100	87.905	Mesocricetus_auratus
ENSMLEG00000039674	SCAF4	100	96.413	ENSMICG00000005256	SCAF4	99	96.413	Microcebus_murinus
ENSMLEG00000039674	SCAF4	100	85.789	ENSMOCG00000012087	Scaf4	99	86.186	Microtus_ochrogaster
ENSMLEG00000039674	SCAF4	100	84.293	ENSMODG00000021040	SCAF4	99	83.246	Monodelphis_domestica
ENSMLEG00000039674	SCAF4	100	82.759	MGP_CAROLIEiJ_G0020944	Scaf4	99	85.850	Mus_caroli
ENSMLEG00000039674	SCAF4	100	83.251	ENSMUSG00000022983	Scaf4	95	89.770	Mus_musculus
ENSMLEG00000039674	SCAF4	100	82.502	MGP_PahariEiJ_G0016649	Scaf4	99	85.526	Mus_pahari
ENSMLEG00000039674	SCAF4	100	83.842	MGP_SPRETEiJ_G0021850	Scaf4	99	86.038	Mus_spretus
ENSMLEG00000039674	SCAF4	100	92.857	ENSMPUG00000001078	SCAF4	99	93.031	Mustela_putorius_furo
ENSMLEG00000039674	SCAF4	99	77.898	ENSMLUG00000011472	SCAF4	78	84.009	Myotis_lucifugus
ENSMLEG00000039674	SCAF4	100	89.583	ENSNGAG00000005214	Scaf4	99	90.418	Nannospalax_galili
ENSMLEG00000039674	SCAF4	100	98.163	ENSNLEG00000003569	SCAF4	99	98.163	Nomascus_leucogenys
ENSMLEG00000039674	SCAF4	85	90.761	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSMLEG00000039674	SCAF4	100	89.451	ENSODEG00000002718	SCAF4	99	89.194	Octodon_degus
ENSMLEG00000039674	SCAF4	70	57.895	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSMLEG00000039674	SCAF4	100	89.111	ENSOCUG00000008336	SCAF4	99	88.850	Oryctolagus_cuniculus
ENSMLEG00000039674	SCAF4	51	57.480	ENSORLG00000003420	scaf4b	65	58.650	Oryzias_latipes
ENSMLEG00000039674	SCAF4	99	94.743	ENSOGAG00000014653	SCAF4	93	94.869	Otolemur_garnettii
ENSMLEG00000039674	SCAF4	99	90.513	ENSOARG00000013894	SCAF4	98	90.460	Ovis_aries
ENSMLEG00000039674	SCAF4	100	98.338	ENSPPAG00000028535	SCAF4	99	98.338	Pan_paniscus
ENSMLEG00000039674	SCAF4	100	92.583	ENSPPRG00000000635	SCAF4	100	92.496	Panthera_pardus
ENSMLEG00000039674	SCAF4	100	90.376	ENSPTIG00000021578	SCAF4	99	88.056	Panthera_tigris_altaica
ENSMLEG00000039674	SCAF4	100	98.338	ENSPTRG00000013848	SCAF4	99	98.338	Pan_troglodytes
ENSMLEG00000039674	SCAF4	100	99.650	ENSPANG00000017332	SCAF4	99	99.650	Papio_anubis
ENSMLEG00000039674	SCAF4	64	63.770	ENSPKIG00000022408	scaf4a	89	66.161	Paramormyrops_kingsleyae
ENSMLEG00000039674	SCAF4	100	76.655	ENSPSIG00000014242	SCAF4	57	84.211	Pelodiscus_sinensis
ENSMLEG00000039674	SCAF4	61	87.069	ENSPCIG00000028183	SCAF4	91	81.349	Phascolarctos_cinereus
ENSMLEG00000039674	SCAF4	100	98.513	ENSPPYG00000011355	SCAF4	100	98.507	Pongo_abelii
ENSMLEG00000039674	SCAF4	100	95.626	ENSPCOG00000018710	SCAF4	99	95.451	Propithecus_coquereli
ENSMLEG00000039674	SCAF4	100	92.388	ENSPVAG00000005220	SCAF4	99	91.951	Pteropus_vampyrus
ENSMLEG00000039674	SCAF4	75	57.110	ENSPNAG00000016892	scaf4a	59	62.918	Pygocentrus_nattereri
ENSMLEG00000039674	SCAF4	98	85.205	ENSRNOG00000002104	Scaf4	97	85.000	Rattus_norvegicus
ENSMLEG00000039674	SCAF4	100	96.500	ENSRBIG00000040007	SCAF4	99	96.500	Rhinopithecus_bieti
ENSMLEG00000039674	SCAF4	100	98.863	ENSRROG00000029488	SCAF4	100	98.108	Rhinopithecus_roxellana
ENSMLEG00000039674	SCAF4	100	84.353	ENSSHAG00000001581	SCAF4	99	83.042	Sarcophilus_harrisii
ENSMLEG00000039674	SCAF4	89	46.286	ENSSFOG00015006338	scaf4a	54	57.856	Scleropages_formosus
ENSMLEG00000039674	SCAF4	65	56.204	ENSSMAG00000003738	scaf4b	52	71.519	Scophthalmus_maximus
ENSMLEG00000039674	SCAF4	79	53.175	ENSSMAG00000017901	scaf4a	52	52.915	Scophthalmus_maximus
ENSMLEG00000039674	SCAF4	56	60.223	ENSSDUG00000012380	scaf4b	53	70.886	Seriola_dumerili
ENSMLEG00000039674	SCAF4	56	60.223	ENSSLDG00000023152	-	53	70.886	Seriola_lalandi_dorsalis
ENSMLEG00000039674	SCAF4	100	89.607	ENSSARG00000009994	SCAF4	99	89.345	Sorex_araneus
ENSMLEG00000039674	SCAF4	100	89.757	ENSSSCG00000021023	SCAF4	99	90.104	Sus_scrofa
ENSMLEG00000039674	SCAF4	74	72.246	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSMLEG00000039674	SCAF4	50	57.299	ENSTRUG00000009536	-	63	57.604	Takifugu_rubripes
ENSMLEG00000039674	SCAF4	100	92.038	ENSTTRG00000010963	SCAF4	100	91.689	Tursiops_truncatus
ENSMLEG00000039674	SCAF4	100	91.076	ENSUAMG00000008860	SCAF4	99	90.639	Ursus_americanus
ENSMLEG00000039674	SCAF4	99	90.781	ENSUMAG00000016962	SCAF4	100	91.484	Ursus_maritimus
ENSMLEG00000039674	SCAF4	99	93.327	ENSVVUG00000002953	SCAF4	100	92.976	Vulpes_vulpes
ENSMLEG00000039674	SCAF4	99	54.742	ENSXETG00000007351	scaf4	75	65.991	Xenopus_tropicalis