EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMLEG00000040009 (Gene tree)
Gene ID
105536309
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Mandrillus_leucophaeus
Status
putative
Strand
Minus strand
Length
12465 bases
Position
chrKN973629.1:1375663-1388127
Accession
105536309
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMLEP00000031623RRM_1PF00076.222.2e-4312
ENSMLEP00000031623RRM_1PF00076.222.2e-4322
ENSMLEP00000031643RRM_1PF00076.222.6e-4312
ENSMLEP00000031643RRM_1PF00076.222.6e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMLET00000055215PUF60-2021951XM_011975673ENSMLEP00000031643516 (aa)XP_011831063A0A2K5ZV27
ENSMLET00000055195PUF60-2011785XM_011975675ENSMLEP00000031623499 (aa)XP_011831065A0A2K5ZV09
Gene Model
Click here to download ENSMLEG00000040009's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000040009's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMLEG00000040009PUF605436.000ENSMLEG00000032219U2AF25637.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMLEG00000040009PUF60100100.000ENSG00000179950PUF60100100.000Homo_sapiens
ENSMLEG00000040009PUF6010086.180ENSAPOG00000001713puf60b9886.180Acanthochromis_polyacanthus
ENSMLEG00000040009PUF6010097.481ENSAMEG00000006406PUF609297.481Ailuropoda_melanoleuca
ENSMLEG00000040009PUF6010085.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSMLEG00000040009PUF6010077.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSMLEG00000040009PUF6010086.180ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSMLEG00000040009PUF6010081.923ENSAOCG00000015558-9782.500Amphiprion_ocellaris
ENSMLEG00000040009PUF6010075.198ENSAPEG00000001836-9976.471Amphiprion_percula
ENSMLEG00000040009PUF6010083.333ENSAPEG00000011923puf60b9783.333Amphiprion_percula
ENSMLEG00000040009PUF6010085.988ENSATEG00000001730puf60b9885.988Anabas_testudineus
ENSMLEG00000040009PUF6010081.503ENSATEG00000006303-9881.888Anabas_testudineus
ENSMLEG00000040009PUF6010098.256ENSAPLG00000010150PUF609998.256Anas_platyrhynchos
ENSMLEG00000040009PUF6010096.917ENSACAG00000001645PUF609696.917Anolis_carolinensis
ENSMLEG00000040009PUF6010099.612ENSANAG00000018626PUF6010099.612Aotus_nancymaae
ENSMLEG00000040009PUF6010085.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSMLEG00000040009PUF6010076.449ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSMLEG00000040009PUF6010085.799ENSAMXG00000036570puf60a9785.602Astyanax_mexicanus
ENSMLEG00000040009PUF6010099.225ENSBTAG00000037493PUF609899.225Bos_taurus
ENSMLEG00000040009PUF608052.650WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSMLEG00000040009PUF6010099.806ENSCJAG00000021485PUF609799.806Callithrix_jacchus
ENSMLEG00000040009PUF6010099.599ENSCAFG00000001400PUF609299.599Canis_familiaris
ENSMLEG00000040009PUF6010099.612ENSCAFG00020018754PUF609799.612Canis_lupus_dingo
ENSMLEG00000040009PUF6010099.225ENSCHIG00000001618PUF608699.225Capra_hircus
ENSMLEG00000040009PUF6010099.612ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSMLEG00000040009PUF6010093.462ENSCPOG00000014613PUF609393.462Cavia_porcellus
ENSMLEG00000040009PUF6010099.612ENSCCAG00000007744PUF609799.612Cebus_capucinus
ENSMLEG00000040009PUF60100100.000ENSCATG00000035405PUF6097100.000Cercocebus_atys
ENSMLEG00000040009PUF6010099.419ENSCLAG00000009154PUF609199.419Chinchilla_lanigera
ENSMLEG00000040009PUF60100100.000ENSCSAG00000008878PUF60100100.000Chlorocebus_sabaeus
ENSMLEG00000040009PUF6010098.256ENSCPBG00000005595PUF609798.256Chrysemys_picta_bellii
ENSMLEG00000040009PUF609849.904ENSCING00000008436-9550.295Ciona_intestinalis
ENSMLEG00000040009PUF606363.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSMLEG00000040009PUF609750.205ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSMLEG00000040009PUF609755.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSMLEG00000040009PUF6081100.000ENSCANG00000041843PUF60100100.000Colobus_angolensis_palliatus
ENSMLEG00000040009PUF6010098.837ENSCGRG00001017442Puf609198.837Cricetulus_griseus_chok1gshd
ENSMLEG00000040009PUF6010098.837ENSCGRG00000003717Puf609298.837Cricetulus_griseus_crigri
ENSMLEG00000040009PUF6010075.099ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSMLEG00000040009PUF6010085.221ENSCSEG00000019887puf60b9185.029Cynoglossus_semilaevis
ENSMLEG00000040009PUF6010084.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSMLEG00000040009PUF609080.795ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSMLEG00000040009PUF6010087.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSMLEG00000040009PUF6010078.759ENSDARG00000001241puf60b9996.032Danio_rerio
ENSMLEG00000040009PUF609883.826ENSDNOG00000043278PUF609083.826Dasypus_novemcinctus
ENSMLEG00000040009PUF6010099.225ENSDORG00000004585Puf609499.225Dipodomys_ordii
ENSMLEG00000040009PUF609750.796FBgn0028577hfp9947.523Drosophila_melanogaster
ENSMLEG00000040009PUF609872.279ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSMLEG00000040009PUF6010063.176ENSEBUG00000014291puf60b8466.314Eptatretus_burgeri
ENSMLEG00000040009PUF6010099.612ENSEASG00005009695PUF609799.612Equus_asinus_asinus
ENSMLEG00000040009PUF6010099.612ENSECAG00000024681PUF609699.612Equus_caballus
ENSMLEG00000040009PUF6010085.687ENSELUG00000018443-9985.602Esox_lucius
ENSMLEG00000040009PUF6010084.038ENSELUG00000006507puf60b9980.220Esox_lucius
ENSMLEG00000040009PUF6010099.225ENSFCAG00000001045PUF6010099.225Felis_catus
ENSMLEG00000040009PUF6010085.465ENSFALG00000001136PUF609786.628Ficedula_albicollis
ENSMLEG00000040009PUF6010099.225ENSFDAG00000017177PUF609199.225Fukomys_damarensis
ENSMLEG00000040009PUF6010084.837ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSMLEG00000040009PUF609679.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSMLEG00000040009PUF6010071.673ENSGMOG00000006392puf60b9970.913Gadus_morhua
ENSMLEG00000040009PUF606797.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSMLEG00000040009PUF6010084.261ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSMLEG00000040009PUF6010079.441ENSGAFG00000004334-9978.842Gambusia_affinis
ENSMLEG00000040009PUF6010073.805ENSGACG00000004717puf60b9773.129Gasterosteus_aculeatus
ENSMLEG00000040009PUF6010070.600ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSMLEG00000040009PUF6010098.256ENSGAGG00000013289PUF609198.256Gopherus_agassizii
ENSMLEG00000040009PUF60100100.000ENSGGOG00000004646PUF6097100.000Gorilla_gorilla
ENSMLEG00000040009PUF6010082.540ENSHBUG00000009634-10082.540Haplochromis_burtoni
ENSMLEG00000040009PUF6010085.413ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSMLEG00000040009PUF6010099.225ENSHGLG00000006111PUF609199.225Heterocephalus_glaber_female
ENSMLEG00000040009PUF6010099.225ENSHGLG00100012362PUF609199.225Heterocephalus_glaber_male
ENSMLEG00000040009PUF6010082.255ENSHCOG00000015541puf60b9981.852Hippocampus_comes
ENSMLEG00000040009PUF609866.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSMLEG00000040009PUF6010082.806ENSIPUG00000002453puf60a9983.202Ictalurus_punctatus
ENSMLEG00000040009PUF6010078.571ENSIPUG00000004660puf60b9978.343Ictalurus_punctatus
ENSMLEG00000040009PUF6010099.419ENSSTOG00000025037PUF609299.419Ictidomys_tridecemlineatus
ENSMLEG00000040009PUF6010099.031ENSJJAG00000001076Puf609299.031Jaculus_jaculus
ENSMLEG00000040009PUF6010084.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSMLEG00000040009PUF6010078.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSMLEG00000040009PUF6010083.493ENSLBEG00000012505puf60b10083.493Labrus_bergylta
ENSMLEG00000040009PUF607390.984ENSLACG00000005456PUF6010090.710Latimeria_chalumnae
ENSMLEG00000040009PUF6010091.137ENSLOCG00000010106puf60b9889.981Lepisosteus_oculatus
ENSMLEG00000040009PUF6010098.062ENSLAFG00000022929PUF609398.062Loxodonta_africana
ENSMLEG00000040009PUF60100100.000ENSMFAG00000043373PUF6098100.000Macaca_fascicularis
ENSMLEG00000040009PUF60100100.000ENSMMUG00000013558PUF6097100.000Macaca_mulatta
ENSMLEG00000040009PUF60100100.000ENSMNEG00000031099PUF6097100.000Macaca_nemestrina
ENSMLEG00000040009PUF6010085.797ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSMLEG00000040009PUF6010083.109ENSMAMG00000019476-9882.726Mastacembelus_armatus
ENSMLEG00000040009PUF6010085.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSMLEG00000040009PUF6010082.534ENSMZEG00005019425-9882.534Maylandia_zebra
ENSMLEG00000040009PUF6010098.256ENSMGAG00000013070PUF609798.256Meleagris_gallopavo
ENSMLEG00000040009PUF607098.889ENSMAUG00000014267-8898.889Mesocricetus_auratus
ENSMLEG00000040009PUF609683.195ENSMAUG00000018549-9583.195Mesocricetus_auratus
ENSMLEG00000040009PUF6010099.612ENSMICG00000012226PUF609899.612Microcebus_murinus
ENSMLEG00000040009PUF6010099.031ENSMOCG00000018780Puf609299.031Microtus_ochrogaster
ENSMLEG00000040009PUF6010085.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSMLEG00000040009PUF6010075.800ENSMMOG00000018059-9976.484Mola_mola
ENSMLEG00000040009PUF6010099.399ENSMODG00000009161PUF609399.399Monodelphis_domestica
ENSMLEG00000040009PUF6010081.190ENSMALG00000000200-9879.771Monopterus_albus
ENSMLEG00000040009PUF6010078.311ENSMALG00000006797puf60b9778.311Monopterus_albus
ENSMLEG00000040009PUF6010098.837MGP_CAROLIEiJ_G0019910Puf609198.837Mus_caroli
ENSMLEG00000040009PUF6010098.837ENSMUSG00000002524Puf609198.837Mus_musculus
ENSMLEG00000040009PUF6010098.837MGP_PahariEiJ_G0019920Puf609198.837Mus_pahari
ENSMLEG00000040009PUF6010098.837MGP_SPRETEiJ_G0020812Puf609198.837Mus_spretus
ENSMLEG00000040009PUF6010099.225ENSMPUG00000008137PUF609199.225Mustela_putorius_furo
ENSMLEG00000040009PUF6010098.450ENSMLUG00000000238-9298.450Myotis_lucifugus
ENSMLEG00000040009PUF6010094.990ENSMLUG00000013032-9794.990Myotis_lucifugus
ENSMLEG00000040009PUF6010099.031ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSMLEG00000040009PUF608382.805ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSMLEG00000040009PUF6010082.726ENSNBRG00000017223-9882.692Neolamprologus_brichardi
ENSMLEG00000040009PUF60100100.000ENSNLEG00000002156PUF6097100.000Nomascus_leucogenys
ENSMLEG00000040009PUF607599.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSMLEG00000040009PUF609873.964ENSODEG00000015513-9672.340Octodon_degus
ENSMLEG00000040009PUF6072100.000ENSODEG00000014024-89100.000Octodon_degus
ENSMLEG00000040009PUF6010085.413ENSONIG00000006247puf60b9785.413Oreochromis_niloticus
ENSMLEG00000040009PUF6010082.726ENSONIG00000014030-9782.726Oreochromis_niloticus
ENSMLEG00000040009PUF609778.020ENSOANG00000006962PUF609778.218Ornithorhynchus_anatinus
ENSMLEG00000040009PUF609978.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSMLEG00000040009PUF6010085.221ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSMLEG00000040009PUF6010085.221ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSMLEG00000040009PUF609979.198ENSORLG00020018144-9779.310Oryzias_latipes_hni
ENSMLEG00000040009PUF6010084.321ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSMLEG00000040009PUF609979.198ENSORLG00015016833-9779.310Oryzias_latipes_hsok
ENSMLEG00000040009PUF6010082.895ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSMLEG00000040009PUF609980.357ENSOMEG00000022185-9780.230Oryzias_melastigma
ENSMLEG00000040009PUF6010099.419ENSOGAG00000006259PUF609299.419Otolemur_garnettii
ENSMLEG00000040009PUF6010096.705ENSOARG00000016235PUF609796.705Ovis_aries
ENSMLEG00000040009PUF60100100.000ENSPPAG00000029933PUF6097100.000Pan_paniscus
ENSMLEG00000040009PUF6010099.225ENSPPRG00000003257PUF6010099.225Panthera_pardus
ENSMLEG00000040009PUF6010098.998ENSPTIG00000009795PUF609896.899Panthera_tigris_altaica
ENSMLEG00000040009PUF6010099.806ENSPTRG00000020670PUF609799.806Pan_troglodytes
ENSMLEG00000040009PUF6010099.806ENSPTRG00000043963-9799.806Pan_troglodytes
ENSMLEG00000040009PUF60100100.000ENSPANG00000021936PUF6097100.000Papio_anubis
ENSMLEG00000040009PUF6010086.561ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSMLEG00000040009PUF6010087.885ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSMLEG00000040009PUF6010098.062ENSPSIG00000004679PUF609898.062Pelodiscus_sinensis
ENSMLEG00000040009PUF6010084.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSMLEG00000040009PUF6010099.031ENSPEMG00000008820Puf609299.031Peromyscus_maniculatus_bairdii
ENSMLEG00000040009PUF6010099.419ENSPCIG00000020270PUF609899.419Phascolarctos_cinereus
ENSMLEG00000040009PUF6010080.732ENSPFOG00000011118-9781.081Poecilia_formosa
ENSMLEG00000040009PUF6010084.837ENSPFOG00000019217puf60b9885.516Poecilia_formosa
ENSMLEG00000040009PUF6010084.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSMLEG00000040009PUF6010080.732ENSPLAG00000017025-9080.695Poecilia_latipinna
ENSMLEG00000040009PUF6010080.732ENSPMEG00000009767-9081.081Poecilia_mexicana
ENSMLEG00000040009PUF6010084.837ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSMLEG00000040009PUF6010082.540ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSMLEG00000040009PUF608198.321ENSPPYG00000018951-9598.321Pongo_abelii
ENSMLEG00000040009PUF608199.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSMLEG00000040009PUF6010099.419ENSPCOG00000027981PUF609899.419Propithecus_coquereli
ENSMLEG00000040009PUF60100100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSMLEG00000040009PUF6010082.534ENSPNYG00000004273-9882.534Pundamilia_nyererei
ENSMLEG00000040009PUF6010085.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSMLEG00000040009PUF6010085.799ENSPNAG00000019909puf60a9985.602Pygocentrus_nattereri
ENSMLEG00000040009PUF6010080.556ENSPNAG00000019415puf60b8980.080Pygocentrus_nattereri
ENSMLEG00000040009PUF6010098.837ENSRNOG00000009960Puf609298.837Rattus_norvegicus
ENSMLEG00000040009PUF60100100.000ENSRBIG00000035274PUF6097100.000Rhinopithecus_bieti
ENSMLEG00000040009PUF60100100.000ENSRROG00000029360PUF6098100.000Rhinopithecus_roxellana
ENSMLEG00000040009PUF6010098.450ENSSBOG00000027089PUF609798.450Saimiri_boliviensis_boliviensis
ENSMLEG00000040009PUF609098.707ENSSHAG00000006668PUF608998.707Sarcophilus_harrisii
ENSMLEG00000040009PUF6010081.868ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSMLEG00000040009PUF609686.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSMLEG00000040009PUF607394.224ENSSMAG00000016381puf60b7294.224Scophthalmus_maximus
ENSMLEG00000040009PUF6010084.211ENSSDUG00000009935puf60b9984.242Seriola_dumerili
ENSMLEG00000040009PUF609980.888ENSSDUG00000007048-9781.081Seriola_dumerili
ENSMLEG00000040009PUF6010085.988ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSMLEG00000040009PUF6010080.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSMLEG00000040009PUF606784.971ENSSPUG00000013518PUF609485.460Sphenodon_punctatus
ENSMLEG00000040009PUF6010081.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSMLEG00000040009PUF6010083.364ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSMLEG00000040009PUF6010099.225ENSSSCG00000038800PUF609799.198Sus_scrofa
ENSMLEG00000040009PUF6010094.961ENSTGUG00000012797-9994.961Taeniopygia_guttata
ENSMLEG00000040009PUF6010084.837ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSMLEG00000040009PUF6010079.760ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSMLEG00000040009PUF6010078.488ENSTNIG00000003069-9978.488Tetraodon_nigroviridis
ENSMLEG00000040009PUF6010084.837ENSTNIG00000013675puf60b9984.645Tetraodon_nigroviridis
ENSMLEG00000040009PUF606295.608ENSTBEG00000002751-9995.593Tupaia_belangeri
ENSMLEG00000040009PUF608181.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSMLEG00000040009PUF6010098.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSMLEG00000040009PUF6010099.612ENSUAMG00000024917PUF609799.612Ursus_americanus
ENSMLEG00000040009PUF6010094.767ENSUMAG00000000272PUF609294.767Ursus_maritimus
ENSMLEG00000040009PUF6010099.612ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSMLEG00000040009PUF6010094.389ENSXETG00000012469puf609894.389Xenopus_tropicalis
ENSMLEG00000040009PUF6010084.325ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSMLEG00000040009PUF6010084.837ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus
ENSMLEG00000040009PUF6010081.038ENSXMAG00000010507-9880.240Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us