EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000040236 (Gene tree)
Gene ID: -
Gene Symbol: SMNDC1
Alias: SMNR|SPF30|TDRD16C
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 15776 bases
Position: chrKN979163.1:5555643-5571418
Accession: 16900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000032045	SMN	PF06003.12	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000055620	SMNDC1-201	705	-	ENSMLEP00000032045	234 (aa)	-	A0A2K5ZW52

Gene Model

Click here to download ENSMLEG00000040236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000040236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000040236	SMNDC1	100	92.887	ENSG00000119953	SMNDC1	100	93.305	Homo_sapiens
ENSMLEG00000040236	SMNDC1	100	69.874	ENSAPOG00000021772	smndc1	100	70.293	Acanthochromis_polyacanthus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSAMEG00000005251	SMNDC1	100	93.724	Ailuropoda_melanoleuca
ENSMLEG00000040236	SMNDC1	100	72.500	ENSACIG00000004819	smndc1	100	72.917	Amphilophus_citrinellus
ENSMLEG00000040236	SMNDC1	100	69.874	ENSAOCG00000017869	smndc1	100	70.293	Amphiprion_ocellaris
ENSMLEG00000040236	SMNDC1	100	69.874	ENSAPEG00000007752	smndc1	100	70.293	Amphiprion_percula
ENSMLEG00000040236	SMNDC1	100	70.711	ENSATEG00000006830	smndc1	100	71.130	Anabas_testudineus
ENSMLEG00000040236	SMNDC1	82	88.889	ENSAPLG00000004322	SMNDC1	100	89.394	Anas_platyrhynchos
ENSMLEG00000040236	SMNDC1	100	88.285	ENSACAG00000005983	SMNDC1	100	88.703	Anolis_carolinensis
ENSMLEG00000040236	SMNDC1	100	93.305	ENSANAG00000032875	SMNDC1	100	93.724	Aotus_nancymaae
ENSMLEG00000040236	SMNDC1	100	71.548	ENSACLG00000016360	smndc1	100	71.967	Astatotilapia_calliptera
ENSMLEG00000040236	SMNDC1	100	71.130	ENSAMXG00000020310	smndc1	100	71.548	Astyanax_mexicanus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSBTAG00000000551	SMNDC1	100	93.305	Bos_taurus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSCJAG00000018624	SMNDC1	100	93.724	Callithrix_jacchus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSCAFG00000010720	SMNDC1	100	93.724	Canis_familiaris
ENSMLEG00000040236	SMNDC1	100	93.305	ENSCAFG00020011913	SMNDC1	100	93.724	Canis_lupus_dingo
ENSMLEG00000040236	SMNDC1	100	92.887	ENSCHIG00000010604	SMNDC1	100	93.305	Capra_hircus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSTSYG00000026454	SMNDC1	100	93.305	Carlito_syrichta
ENSMLEG00000040236	SMNDC1	84	91.089	ENSCAPG00000009132	SMNDC1	100	91.584	Cavia_aperea
ENSMLEG00000040236	SMNDC1	100	92.469	ENSCPOG00000031666	SMNDC1	100	92.887	Cavia_porcellus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSCCAG00000021793	SMNDC1	100	93.724	Cebus_capucinus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSCATG00000035910	SMNDC1	100	93.305	Cercocebus_atys
ENSMLEG00000040236	SMNDC1	100	92.050	ENSCLAG00000002838	SMNDC1	100	92.469	Chinchilla_lanigera
ENSMLEG00000040236	SMNDC1	100	93.305	ENSCSAG00000005169	SMNDC1	100	93.724	Chlorocebus_sabaeus
ENSMLEG00000040236	SMNDC1	81	91.237	ENSCHOG00000002936	SMNDC1	100	91.753	Choloepus_hoffmanni
ENSMLEG00000040236	SMNDC1	100	91.213	ENSCPBG00000012837	SMNDC1	100	91.632	Chrysemys_picta_bellii
ENSMLEG00000040236	SMNDC1	100	72.385	ENSCANG00000036994	-	100	72.803	Colobus_angolensis_palliatus
ENSMLEG00000040236	SMNDC1	100	84.519	ENSCANG00000034620	-	100	84.937	Colobus_angolensis_palliatus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSCANG00000031720	-	100	93.724	Colobus_angolensis_palliatus
ENSMLEG00000040236	SMNDC1	100	92.469	ENSCGRG00001012973	Smndc1	100	92.887	Cricetulus_griseus_chok1gshd
ENSMLEG00000040236	SMNDC1	100	92.469	ENSCGRG00000012396	Smndc1	100	92.887	Cricetulus_griseus_crigri
ENSMLEG00000040236	SMNDC1	100	70.464	ENSCSEG00000015621	smndc1	100	70.886	Cynoglossus_semilaevis
ENSMLEG00000040236	SMNDC1	100	71.548	ENSCVAG00000020432	smndc1	100	71.967	Cyprinodon_variegatus
ENSMLEG00000040236	SMNDC1	100	73.109	ENSDARG00000056235	smndc1	100	74.477	Danio_rerio
ENSMLEG00000040236	SMNDC1	100	93.305	ENSDNOG00000016387	SMNDC1	83	93.724	Dasypus_novemcinctus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSDORG00000023715	Smndc1	100	93.724	Dipodomys_ordii
ENSMLEG00000040236	SMNDC1	95	38.095	FBgn0039977	CG17454	98	40.079	Drosophila_melanogaster
ENSMLEG00000040236	SMNDC1	100	64.876	ENSEBUG00000010929	smndc1	100	65.289	Eptatretus_burgeri
ENSMLEG00000040236	SMNDC1	100	93.305	ENSEASG00005014930	SMNDC1	100	93.724	Equus_asinus_asinus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSECAG00000029973	SMNDC1	100	93.724	Equus_caballus
ENSMLEG00000040236	SMNDC1	53	97.872	ENSEEUG00000013407	-	69	97.872	Erinaceus_europaeus
ENSMLEG00000040236	SMNDC1	100	72.574	ENSELUG00000000227	smndc1	100	71.730	Esox_lucius
ENSMLEG00000040236	SMNDC1	100	93.305	ENSFCAG00000027353	SMNDC1	100	93.724	Felis_catus
ENSMLEG00000040236	SMNDC1	100	89.540	ENSFALG00000002306	SMNDC1	100	89.958	Ficedula_albicollis
ENSMLEG00000040236	SMNDC1	100	92.050	ENSFDAG00000006468	SMNDC1	100	92.469	Fukomys_damarensis
ENSMLEG00000040236	SMNDC1	100	71.130	ENSFHEG00000020150	smndc1	100	71.548	Fundulus_heteroclitus
ENSMLEG00000040236	SMNDC1	100	71.308	ENSGMOG00000016585	smndc1	100	71.667	Gadus_morhua
ENSMLEG00000040236	SMNDC1	100	89.540	ENSGALG00000008561	SMNDC1	100	89.958	Gallus_gallus
ENSMLEG00000040236	SMNDC1	100	70.293	ENSGAFG00000011582	smndc1	100	70.711	Gambusia_affinis
ENSMLEG00000040236	SMNDC1	100	70.711	ENSGACG00000009468	smndc1	100	71.074	Gasterosteus_aculeatus
ENSMLEG00000040236	SMNDC1	100	91.213	ENSGAGG00000024547	SMNDC1	100	91.632	Gopherus_agassizii
ENSMLEG00000040236	SMNDC1	100	93.305	ENSGGOG00000010071	SMNDC1	100	93.724	Gorilla_gorilla
ENSMLEG00000040236	SMNDC1	100	71.548	ENSHBUG00000017596	smndc1	100	71.967	Haplochromis_burtoni
ENSMLEG00000040236	SMNDC1	100	69.167	ENSHGLG00000001157	-	100	68.050	Heterocephalus_glaber_female
ENSMLEG00000040236	SMNDC1	100	92.050	ENSHGLG00000013390	-	100	92.469	Heterocephalus_glaber_female
ENSMLEG00000040236	SMNDC1	100	92.050	ENSHGLG00100004814	-	100	92.469	Heterocephalus_glaber_male
ENSMLEG00000040236	SMNDC1	100	77.500	ENSHGLG00100004278	-	100	77.500	Heterocephalus_glaber_male
ENSMLEG00000040236	SMNDC1	100	70.417	ENSHCOG00000000783	smndc1	100	70.782	Hippocampus_comes
ENSMLEG00000040236	SMNDC1	100	72.385	ENSIPUG00000004217	smndc1	100	72.803	Ictalurus_punctatus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSSTOG00000006088	SMNDC1	100	93.305	Ictidomys_tridecemlineatus
ENSMLEG00000040236	SMNDC1	100	92.469	ENSJJAG00000019974	Smndc1	100	92.887	Jaculus_jaculus
ENSMLEG00000040236	SMNDC1	100	70.293	ENSKMAG00000020134	smndc1	100	70.711	Kryptolebias_marmoratus
ENSMLEG00000040236	SMNDC1	100	69.874	ENSLBEG00000004598	smndc1	100	70.248	Labrus_bergylta
ENSMLEG00000040236	SMNDC1	100	77.824	ENSLACG00000007784	SMNDC1	100	78.243	Latimeria_chalumnae
ENSMLEG00000040236	SMNDC1	100	76.349	ENSLOCG00000012355	smndc1	100	78.151	Lepisosteus_oculatus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSLAFG00000014353	SMNDC1	100	93.724	Loxodonta_africana
ENSMLEG00000040236	SMNDC1	100	93.305	ENSMFAG00000002433	-	100	93.724	Macaca_fascicularis
ENSMLEG00000040236	SMNDC1	100	76.151	ENSMFAG00000038381	-	100	76.151	Macaca_fascicularis
ENSMLEG00000040236	SMNDC1	100	76.151	ENSMMUG00000045875	-	100	76.151	Macaca_mulatta
ENSMLEG00000040236	SMNDC1	100	93.305	ENSMMUG00000007775	SMNDC1	100	93.724	Macaca_mulatta
ENSMLEG00000040236	SMNDC1	100	80.753	ENSMNEG00000033853	-	100	81.172	Macaca_nemestrina
ENSMLEG00000040236	SMNDC1	100	93.305	ENSMNEG00000042963	-	100	93.724	Macaca_nemestrina
ENSMLEG00000040236	SMNDC1	89	67.757	ENSMAMG00000018233	smndc1	87	68.224	Mastacembelus_armatus
ENSMLEG00000040236	SMNDC1	100	71.548	ENSMZEG00005027510	smndc1	100	71.967	Maylandia_zebra
ENSMLEG00000040236	SMNDC1	83	88.500	ENSMGAG00000010777	SMNDC1	84	89.000	Meleagris_gallopavo
ENSMLEG00000040236	SMNDC1	100	93.305	ENSMAUG00000012243	-	100	93.724	Mesocricetus_auratus
ENSMLEG00000040236	SMNDC1	99	78.723	ENSMAUG00000005459	-	93	79.828	Mesocricetus_auratus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSMICG00000027336	-	100	93.305	Microcebus_murinus
ENSMLEG00000040236	SMNDC1	100	79.916	ENSMICG00000031640	-	100	79.916	Microcebus_murinus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSMOCG00000002458	Smndc1	100	93.305	Microtus_ochrogaster
ENSMLEG00000040236	SMNDC1	100	71.130	ENSMMOG00000008856	smndc1	100	71.548	Mola_mola
ENSMLEG00000040236	SMNDC1	100	92.469	ENSMODG00000010542	SMNDC1	100	92.887	Monodelphis_domestica
ENSMLEG00000040236	SMNDC1	100	71.130	ENSMALG00000017598	smndc1	100	71.548	Monopterus_albus
ENSMLEG00000040236	SMNDC1	100	92.050	MGP_CAROLIEiJ_G0023072	Smndc1	100	92.469	Mus_caroli
ENSMLEG00000040236	SMNDC1	100	92.469	ENSMUSG00000025024	Smndc1	100	92.887	Mus_musculus
ENSMLEG00000040236	SMNDC1	100	92.050	MGP_PahariEiJ_G0014560	Smndc1	100	92.469	Mus_pahari
ENSMLEG00000040236	SMNDC1	100	92.469	MGP_SPRETEiJ_G0023993	Smndc1	100	92.887	Mus_spretus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSMPUG00000002089	SMNDC1	100	93.724	Mustela_putorius_furo
ENSMLEG00000040236	SMNDC1	100	92.050	ENSMLUG00000016007	SMNDC1	100	92.469	Myotis_lucifugus
ENSMLEG00000040236	SMNDC1	100	92.469	ENSNGAG00000006833	Smndc1	100	92.887	Nannospalax_galili
ENSMLEG00000040236	SMNDC1	100	71.130	ENSNBRG00000017089	smndc1	100	71.548	Neolamprologus_brichardi
ENSMLEG00000040236	SMNDC1	100	93.305	ENSNLEG00000015471	SMNDC1	100	93.724	Nomascus_leucogenys
ENSMLEG00000040236	SMNDC1	82	53.061	ENSMEUG00000010120	-	99	54.082	Notamacropus_eugenii
ENSMLEG00000040236	SMNDC1	100	92.469	ENSOPRG00000015348	SMNDC1	100	92.887	Ochotona_princeps
ENSMLEG00000040236	SMNDC1	100	65.385	ENSODEG00000007594	-	100	64.103	Octodon_degus
ENSMLEG00000040236	SMNDC1	100	71.130	ENSONIG00000000434	smndc1	100	71.548	Oreochromis_niloticus
ENSMLEG00000040236	SMNDC1	100	91.213	ENSOANG00000001598	SMNDC1	100	91.632	Ornithorhynchus_anatinus
ENSMLEG00000040236	SMNDC1	100	92.469	ENSOCUG00000008145	-	100	92.887	Oryctolagus_cuniculus
ENSMLEG00000040236	SMNDC1	100	70.464	ENSOCUG00000012274	-	100	72.996	Oryctolagus_cuniculus
ENSMLEG00000040236	SMNDC1	100	70.293	ENSORLG00000005934	smndc1	95	70.711	Oryzias_latipes
ENSMLEG00000040236	SMNDC1	100	70.293	ENSORLG00020008796	smndc1	95	70.711	Oryzias_latipes_hni
ENSMLEG00000040236	SMNDC1	100	70.293	ENSORLG00015013666	smndc1	100	70.711	Oryzias_latipes_hsok
ENSMLEG00000040236	SMNDC1	100	71.429	ENSOMEG00000007590	smndc1	100	71.849	Oryzias_melastigma
ENSMLEG00000040236	SMNDC1	100	92.887	ENSOGAG00000000571	SMNDC1	100	93.305	Otolemur_garnettii
ENSMLEG00000040236	SMNDC1	100	92.887	ENSOARG00000009500	SMNDC1	100	93.305	Ovis_aries
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPPAG00000027815	SMNDC1	100	93.724	Pan_paniscus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPPRG00000013749	SMNDC1	100	93.724	Panthera_pardus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPTIG00000011451	SMNDC1	100	93.724	Panthera_tigris_altaica
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPTRG00000002937	SMNDC1	100	93.724	Pan_troglodytes
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPANG00000020805	-	100	93.724	Papio_anubis
ENSMLEG00000040236	SMNDC1	100	88.285	ENSPANG00000031346	-	100	88.285	Papio_anubis
ENSMLEG00000040236	SMNDC1	100	75.732	ENSPKIG00000017164	smndc1	100	76.151	Paramormyrops_kingsleyae
ENSMLEG00000040236	SMNDC1	100	90.795	ENSPSIG00000012257	SMNDC1	100	91.213	Pelodiscus_sinensis
ENSMLEG00000040236	SMNDC1	100	68.354	ENSPMGG00000015651	smndc1	100	68.776	Periophthalmus_magnuspinnatus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPEMG00000022058	Smndc1	100	93.724	Peromyscus_maniculatus_bairdii
ENSMLEG00000040236	SMNDC1	100	62.449	ENSPMAG00000007705	smndc1	100	62.857	Petromyzon_marinus
ENSMLEG00000040236	SMNDC1	100	92.469	ENSPCIG00000018419	SMNDC1	100	92.887	Phascolarctos_cinereus
ENSMLEG00000040236	SMNDC1	97	60.000	ENSPCIG00000009693	-	100	60.000	Phascolarctos_cinereus
ENSMLEG00000040236	SMNDC1	100	70.711	ENSPFOG00000017113	smndc1	100	71.130	Poecilia_formosa
ENSMLEG00000040236	SMNDC1	100	71.130	ENSPLAG00000010372	smndc1	100	71.548	Poecilia_latipinna
ENSMLEG00000040236	SMNDC1	100	71.130	ENSPMEG00000012288	smndc1	100	71.548	Poecilia_mexicana
ENSMLEG00000040236	SMNDC1	100	70.293	ENSPREG00000012279	smndc1	100	70.711	Poecilia_reticulata
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPPYG00000002643	SMNDC1	100	93.724	Pongo_abelii
ENSMLEG00000040236	SMNDC1	81	90.722	ENSPCAG00000016183	SMNDC1	100	91.237	Procavia_capensis
ENSMLEG00000040236	SMNDC1	100	93.305	ENSPCOG00000024343	SMNDC1	100	93.724	Propithecus_coquereli
ENSMLEG00000040236	SMNDC1	76	96.591	ENSPVAG00000004368	SMNDC1	74	96.591	Pteropus_vampyrus
ENSMLEG00000040236	SMNDC1	94	64.629	ENSPNYG00000024093	smndc1	100	65.066	Pundamilia_nyererei
ENSMLEG00000040236	SMNDC1	100	71.967	ENSPNAG00000025285	smndc1	100	72.385	Pygocentrus_nattereri
ENSMLEG00000040236	SMNDC1	100	92.050	ENSRNOG00000014833	Smndc1	100	92.469	Rattus_norvegicus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSRBIG00000000224	-	100	93.305	Rhinopithecus_bieti
ENSMLEG00000040236	SMNDC1	100	75.207	ENSRBIG00000032452	-	100	76.569	Rhinopithecus_bieti
ENSMLEG00000040236	SMNDC1	100	93.305	ENSRROG00000044992	-	100	93.724	Rhinopithecus_roxellana
ENSMLEG00000040236	SMNDC1	100	75.620	ENSRROG00000039125	-	100	76.987	Rhinopithecus_roxellana
ENSMLEG00000040236	SMNDC1	100	93.305	ENSSBOG00000026789	SMNDC1	100	93.724	Saimiri_boliviensis_boliviensis
ENSMLEG00000040236	SMNDC1	100	92.469	ENSSHAG00000015189	SMNDC1	100	92.887	Sarcophilus_harrisii
ENSMLEG00000040236	SMNDC1	100	74.790	ENSSFOG00015008311	smndc1	100	76.569	Scleropages_formosus
ENSMLEG00000040236	SMNDC1	100	70.711	ENSSMAG00000020118	smndc1	100	71.074	Scophthalmus_maximus
ENSMLEG00000040236	SMNDC1	100	71.130	ENSSDUG00000015330	smndc1	100	71.548	Seriola_dumerili
ENSMLEG00000040236	SMNDC1	100	71.130	ENSSLDG00000017325	smndc1	100	71.548	Seriola_lalandi_dorsalis
ENSMLEG00000040236	SMNDC1	100	92.050	ENSSARG00000006063	SMNDC1	100	92.469	Sorex_araneus
ENSMLEG00000040236	SMNDC1	100	89.540	ENSSPUG00000004574	SMNDC1	100	89.958	Sphenodon_punctatus
ENSMLEG00000040236	SMNDC1	100	69.038	ENSSPAG00000000338	smndc1	100	69.456	Stegastes_partitus
ENSMLEG00000040236	SMNDC1	100	92.887	ENSSSCG00000030507	SMNDC1	100	93.305	Sus_scrofa
ENSMLEG00000040236	SMNDC1	100	89.540	ENSTGUG00000010599	SMNDC1	100	89.958	Taeniopygia_guttata
ENSMLEG00000040236	SMNDC1	100	68.619	ENSTRUG00000023281	smndc1	100	69.038	Takifugu_rubripes
ENSMLEG00000040236	SMNDC1	100	69.456	ENSTNIG00000013331	smndc1	100	69.874	Tetraodon_nigroviridis
ENSMLEG00000040236	SMNDC1	100	92.887	ENSTBEG00000014337	SMNDC1	100	93.305	Tupaia_belangeri
ENSMLEG00000040236	SMNDC1	100	93.305	ENSUAMG00000008142	SMNDC1	100	93.724	Ursus_americanus
ENSMLEG00000040236	SMNDC1	100	93.305	ENSUMAG00000023722	SMNDC1	100	93.724	Ursus_maritimus
ENSMLEG00000040236	SMNDC1	82	91.919	ENSVPAG00000003402	SMNDC1	100	92.424	Vicugna_pacos
ENSMLEG00000040236	SMNDC1	100	93.305	ENSVVUG00000007820	SMNDC1	100	93.724	Vulpes_vulpes
ENSMLEG00000040236	SMNDC1	61	80.986	ENSXETG00000015415	SMNDC1	99	80.986	Xenopus_tropicalis
ENSMLEG00000040236	SMNDC1	100	70.042	ENSXCOG00000009159	smndc1	100	70.464	Xiphophorus_couchianus
ENSMLEG00000040236	SMNDC1	100	69.874	ENSXMAG00000012755	smndc1	100	70.293	Xiphophorus_maculatus