EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000040284 (Gene tree)
Gene ID: 105534821
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 19356 bases
Position: chrKN973423.1:105254-124609
Accession: 105534821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000032155	PRP4	PF08799.11	6.8e-14	1	1
ENSMLEP00000032174	PRP4	PF08799.11	7.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000055732	PRPF4-201	3015	XM_011973699	ENSMLEP00000032155	521 (aa)	XP_011829089	A0A2K5ZWF8
ENSMLET00000055751	PRPF4-202	1632	-	ENSMLEP00000032174	543 (aa)	-	A0A2K5ZWM0

Gene Model

Click here to download ENSMLEG00000040284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000040284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000040284	PRPF4	56	33.898	ENSMLEG00000031700	POC1B	63	33.898
ENSMLEG00000040284	PRPF4	56	31.852	ENSMLEG00000039574	POC1A	81	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000040284	PRPF4	100	99.232	ENSG00000136875	PRPF4	100	99.232	Homo_sapiens
ENSMLEG00000040284	PRPF4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSMLEG00000040284	PRPF4	100	99.424	ENSAMEG00000013048	PRPF4	100	98.502	Ailuropoda_melanoleuca
ENSMLEG00000040284	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSMLEG00000040284	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSMLEG00000040284	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSMLEG00000040284	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSMLEG00000040284	PRPF4	100	89.251	ENSAPLG00000006534	PRPF4	98	88.952	Anas_platyrhynchos
ENSMLEG00000040284	PRPF4	100	89.866	ENSACAG00000015110	PRPF4	100	88.910	Anolis_carolinensis
ENSMLEG00000040284	PRPF4	100	99.616	ENSANAG00000022464	PRPF4	100	97.974	Aotus_nancymaae
ENSMLEG00000040284	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSMLEG00000040284	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSMLEG00000040284	PRPF4	100	98.848	ENSBTAG00000004571	PRPF4	100	98.848	Bos_taurus
ENSMLEG00000040284	PRPF4	90	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSMLEG00000040284	PRPF4	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSMLEG00000040284	PRPF4	100	99.424	ENSCAFG00000003224	PRPF4	99	98.692	Canis_familiaris
ENSMLEG00000040284	PRPF4	100	99.424	ENSCAFG00020022637	PRPF4	100	99.424	Canis_lupus_dingo
ENSMLEG00000040284	PRPF4	100	99.042	ENSCHIG00000024648	-	100	99.042	Capra_hircus
ENSMLEG00000040284	PRPF4	100	99.616	ENSTSYG00000010366	PRPF4	100	99.616	Carlito_syrichta
ENSMLEG00000040284	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSMLEG00000040284	PRPF4	100	98.848	ENSCPOG00000010747	-	100	98.848	Cavia_porcellus
ENSMLEG00000040284	PRPF4	100	92.322	ENSCPOG00000014729	-	100	92.322	Cavia_porcellus
ENSMLEG00000040284	PRPF4	100	99.424	ENSCCAG00000028990	PRPF4	100	99.424	Cebus_capucinus
ENSMLEG00000040284	PRPF4	100	100.000	ENSCATG00000021552	PRPF4	100	100.000	Cercocebus_atys
ENSMLEG00000040284	PRPF4	100	99.040	ENSCLAG00000013448	PRPF4	100	99.040	Chinchilla_lanigera
ENSMLEG00000040284	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSMLEG00000040284	PRPF4	99	91.456	ENSCPBG00000019136	PRPF4	73	92.277	Chrysemys_picta_bellii
ENSMLEG00000040284	PRPF4	96	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSMLEG00000040284	PRPF4	96	57.540	ENSCSAVG00000009178	-	100	58.874	Ciona_savignyi
ENSMLEG00000040284	PRPF4	100	99.808	ENSCANG00000003246	PRPF4	100	99.808	Colobus_angolensis_palliatus
ENSMLEG00000040284	PRPF4	100	99.232	ENSCGRG00001016992	Prpf4	100	99.232	Cricetulus_griseus_chok1gshd
ENSMLEG00000040284	PRPF4	100	99.232	ENSCGRG00000017560	Prpf4	100	99.232	Cricetulus_griseus_crigri
ENSMLEG00000040284	PRPF4	97	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSMLEG00000040284	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSMLEG00000040284	PRPF4	100	98.851	ENSDNOG00000013203	PRPF4	100	98.851	Dasypus_novemcinctus
ENSMLEG00000040284	PRPF4	100	99.232	ENSDORG00000026275	Prpf4	100	99.232	Dipodomys_ordii
ENSMLEG00000040284	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSMLEG00000040284	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSMLEG00000040284	PRPF4	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSMLEG00000040284	PRPF4	100	99.616	ENSEASG00005022678	PRPF4	100	99.616	Equus_asinus_asinus
ENSMLEG00000040284	PRPF4	100	99.616	ENSECAG00000007072	PRPF4	100	99.616	Equus_caballus
ENSMLEG00000040284	PRPF4	100	78.166	ENSEEUG00000007480	PRPF4	100	78.166	Erinaceus_europaeus
ENSMLEG00000040284	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSMLEG00000040284	PRPF4	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSMLEG00000040284	PRPF4	98	88.117	ENSFALG00000005423	PRPF4	85	89.474	Ficedula_albicollis
ENSMLEG00000040284	PRPF4	100	98.848	ENSFDAG00000005839	PRPF4	100	98.848	Fukomys_damarensis
ENSMLEG00000040284	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSMLEG00000040284	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	93	91.417	Gallus_gallus
ENSMLEG00000040284	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	66	73.602	Gambusia_affinis
ENSMLEG00000040284	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSMLEG00000040284	PRPF4	99	91.262	ENSGAGG00000025029	PRPF4	94	92.079	Gopherus_agassizii
ENSMLEG00000040284	PRPF4	100	99.232	ENSGGOG00000006943	PRPF4	100	99.232	Gorilla_gorilla
ENSMLEG00000040284	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSMLEG00000040284	PRPF4	100	98.848	ENSHGLG00000015191	PRPF4	100	98.848	Heterocephalus_glaber_female
ENSMLEG00000040284	PRPF4	100	80.230	ENSHGLG00000003838	-	100	80.230	Heterocephalus_glaber_female
ENSMLEG00000040284	PRPF4	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSMLEG00000040284	PRPF4	100	80.230	ENSHGLG00100005571	-	100	80.230	Heterocephalus_glaber_male
ENSMLEG00000040284	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSMLEG00000040284	PRPF4	100	99.040	ENSSTOG00000027833	PRPF4	100	99.040	Ictidomys_tridecemlineatus
ENSMLEG00000040284	PRPF4	100	99.232	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSMLEG00000040284	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSMLEG00000040284	PRPF4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSMLEG00000040284	PRPF4	99	80.347	ENSLACG00000016317	PRPF4	97	81.657	Latimeria_chalumnae
ENSMLEG00000040284	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSMLEG00000040284	PRPF4	100	98.851	ENSLAFG00000018225	PRPF4	100	98.851	Loxodonta_africana
ENSMLEG00000040284	PRPF4	100	99.816	ENSMFAG00000039397	PRPF4	100	99.816	Macaca_fascicularis
ENSMLEG00000040284	PRPF4	100	100.000	ENSMMUG00000005844	PRPF4	100	100.000	Macaca_mulatta
ENSMLEG00000040284	PRPF4	100	89.443	ENSMNEG00000033737	PRPF4	100	89.443	Macaca_nemestrina
ENSMLEG00000040284	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSMLEG00000040284	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSMLEG00000040284	PRPF4	99	88.269	ENSMGAG00000001796	PRPF4	100	86.778	Meleagris_gallopavo
ENSMLEG00000040284	PRPF4	100	98.656	ENSMAUG00000018022	Prpf4	100	98.656	Mesocricetus_auratus
ENSMLEG00000040284	PRPF4	100	98.656	ENSMICG00000015022	PRPF4	100	98.467	Microcebus_murinus
ENSMLEG00000040284	PRPF4	100	98.656	ENSMOCG00000018273	Prpf4	100	98.656	Microtus_ochrogaster
ENSMLEG00000040284	PRPF4	97	74.556	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSMLEG00000040284	PRPF4	100	95.220	ENSMODG00000025096	-	99	93.657	Monodelphis_domestica
ENSMLEG00000040284	PRPF4	100	95.029	ENSMODG00000004444	-	100	95.029	Monodelphis_domestica
ENSMLEG00000040284	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSMLEG00000040284	PRPF4	100	99.040	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.040	Mus_caroli
ENSMLEG00000040284	PRPF4	100	99.040	ENSMUSG00000066148	Prpf4	100	99.040	Mus_musculus
ENSMLEG00000040284	PRPF4	100	98.848	MGP_PahariEiJ_G0028413	Prpf4	100	98.848	Mus_pahari
ENSMLEG00000040284	PRPF4	100	99.040	MGP_SPRETEiJ_G0027042	Prpf4	100	99.040	Mus_spretus
ENSMLEG00000040284	PRPF4	100	99.424	ENSMPUG00000007883	PRPF4	100	99.424	Mustela_putorius_furo
ENSMLEG00000040284	PRPF4	100	99.040	ENSMLUG00000015309	-	99	98.311	Myotis_lucifugus
ENSMLEG00000040284	PRPF4	100	97.121	ENSMLUG00000008626	-	99	96.415	Myotis_lucifugus
ENSMLEG00000040284	PRPF4	100	93.858	ENSNGAG00000000468	Prpf4	100	93.858	Nannospalax_galili
ENSMLEG00000040284	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSMLEG00000040284	PRPF4	100	99.616	ENSNLEG00000016647	PRPF4	100	99.616	Nomascus_leucogenys
ENSMLEG00000040284	PRPF4	99	95.331	ENSMEUG00000013256	PRPF4	98	96.245	Notamacropus_eugenii
ENSMLEG00000040284	PRPF4	100	98.659	ENSOPRG00000005302	PRPF4	100	98.659	Ochotona_princeps
ENSMLEG00000040284	PRPF4	100	99.232	ENSODEG00000018147	PRPF4	100	99.232	Octodon_degus
ENSMLEG00000040284	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSMLEG00000040284	PRPF4	100	99.424	ENSOCUG00000005046	PRPF4	100	99.424	Oryctolagus_cuniculus
ENSMLEG00000040284	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSMLEG00000040284	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSMLEG00000040284	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSMLEG00000040284	PRPF4	100	94.242	ENSOGAG00000007802	PRPF4	100	93.071	Otolemur_garnettii
ENSMLEG00000040284	PRPF4	100	99.232	ENSOARG00000006319	PRPF4	100	97.790	Ovis_aries
ENSMLEG00000040284	PRPF4	100	99.232	ENSPPAG00000041797	PRPF4	100	99.232	Pan_paniscus
ENSMLEG00000040284	PRPF4	100	99.616	ENSPPRG00000014360	PRPF4	100	99.616	Panthera_pardus
ENSMLEG00000040284	PRPF4	100	99.616	ENSPTIG00000009574	PRPF4	100	99.616	Panthera_tigris_altaica
ENSMLEG00000040284	PRPF4	100	99.232	ENSPTRG00000021274	PRPF4	100	99.042	Pan_troglodytes
ENSMLEG00000040284	PRPF4	100	99.816	ENSPANG00000025776	PRPF4	100	99.816	Papio_anubis
ENSMLEG00000040284	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSMLEG00000040284	PRPF4	100	89.827	ENSPSIG00000010713	PRPF4	89	91.881	Pelodiscus_sinensis
ENSMLEG00000040284	PRPF4	99	58.716	ENSPMGG00000000997	prpf4	98	59.252	Periophthalmus_magnuspinnatus
ENSMLEG00000040284	PRPF4	100	99.232	ENSPEMG00000024115	Prpf4	100	99.232	Peromyscus_maniculatus_bairdii
ENSMLEG00000040284	PRPF4	99	95.331	ENSPCIG00000003821	PRPF4	98	96.245	Phascolarctos_cinereus
ENSMLEG00000040284	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSMLEG00000040284	PRPF4	83	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSMLEG00000040284	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSMLEG00000040284	PRPF4	98	99.220	ENSPCAG00000002561	PRPF4	99	99.220	Procavia_capensis
ENSMLEG00000040284	PRPF4	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSMLEG00000040284	PRPF4	100	95.402	ENSPVAG00000004708	PRPF4	100	94.444	Pteropus_vampyrus
ENSMLEG00000040284	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSMLEG00000040284	PRPF4	97	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSMLEG00000040284	PRPF4	100	98.848	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSMLEG00000040284	PRPF4	100	99.808	ENSRBIG00000040221	PRPF4	100	99.808	Rhinopithecus_bieti
ENSMLEG00000040284	PRPF4	100	99.808	ENSRROG00000040240	PRPF4	100	99.808	Rhinopithecus_roxellana
ENSMLEG00000040284	PRPF4	100	95.602	ENSSHAG00000017658	PRPF4	100	95.602	Sarcophilus_harrisii
ENSMLEG00000040284	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSMLEG00000040284	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSMLEG00000040284	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSMLEG00000040284	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSMLEG00000040284	PRPF4	100	90.403	ENSSPUG00000015582	PRPF4	100	90.019	Sphenodon_punctatus
ENSMLEG00000040284	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSMLEG00000040284	PRPF4	100	99.616	ENSSSCG00000024648	PRPF4	100	99.616	Sus_scrofa
ENSMLEG00000040284	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSMLEG00000040284	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSMLEG00000040284	PRPF4	97	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSMLEG00000040284	PRPF4	100	90.421	ENSTBEG00000000821	PRPF4	100	90.421	Tupaia_belangeri
ENSMLEG00000040284	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSMLEG00000040284	PRPF4	64	96.108	ENSUAMG00000018288	PRPF4	90	96.108	Ursus_americanus
ENSMLEG00000040284	PRPF4	100	98.848	ENSUMAG00000019375	PRPF4	100	98.848	Ursus_maritimus
ENSMLEG00000040284	PRPF4	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSMLEG00000040284	PRPF4	100	98.286	ENSVVUG00000002476	PRPF4	100	98.422	Vulpes_vulpes
ENSMLEG00000040284	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.653	Xiphophorus_couchianus
ENSMLEG00000040284	PRPF4	88	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus