EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000040706 (Gene tree)
Gene ID: 105549113
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 16681 bases
Position: chrKN976557.1:3693862-3710542
Accession: 105549113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000033572	KH_1	PF00013.29	1.9e-07	1	1
ENSMLEP00000033544	KH_1	PF00013.29	2.8e-07	1	1
ENSMLEP00000033481	KH_1	PF00013.29	3.7e-07	1	1
ENSMLEP00000033485	KH_1	PF00013.29	3.8e-07	1	1
ENSMLEP00000033535	KH_1	PF00013.29	4e-07	1	1
ENSMLEP00000033572	zf-CCHC	PF00098.23	0.00017	1	1
ENSMLEP00000033544	zf-CCHC	PF00098.23	0.00018	1	1
ENSMLEP00000033485	zf-CCHC	PF00098.23	0.00024	1	1
ENSMLEP00000033481	zf-CCHC	PF00098.23	0.00024	1	1
ENSMLEP00000033535	zf-CCHC	PF00098.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000057068	SF1-202	2934	XM_011993512	ENSMLEP00000033485	659 (aa)	XP_011848902	A0A2K6A0A3
ENSMLET00000057118	SF1-203	1968	-	ENSMLEP00000033535	655 (aa)	-	A0A2K6A0F7
ENSMLET00000057064	SF1-201	3366	XM_011993511	ENSMLEP00000033481	660 (aa)	XP_011848901	A0A2K6A085
ENSMLET00000057155	SF1-205	1248	-	ENSMLEP00000033572	415 (aa)	-	A0A2K6A0L5
ENSMLET00000057127	SF1-204	1515	-	ENSMLEP00000033544	504 (aa)	-	A0A2K6A0F4

Gene Model

Click here to download ENSMLEG00000040706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000040706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000040706	SF1	90	81.299	ENSAPOG00000012341	sf1	57	79.494	Acanthochromis_polyacanthus
ENSMLEG00000040706	SF1	89	99.458	ENSAMEG00000017828	SF1	99	94.046	Ailuropoda_melanoleuca
ENSMLEG00000040706	SF1	88	83.651	ENSACIG00000016514	sf1	61	78.780	Amphilophus_citrinellus
ENSMLEG00000040706	SF1	90	80.779	ENSAOCG00000010934	sf1	59	76.555	Amphiprion_ocellaris
ENSMLEG00000040706	SF1	90	80.779	ENSAPEG00000009498	sf1	59	76.555	Amphiprion_percula
ENSMLEG00000040706	SF1	90	80.779	ENSATEG00000001894	sf1	60	77.381	Anabas_testudineus
ENSMLEG00000040706	SF1	98	86.241	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSMLEG00000040706	SF1	100	98.086	ENSANAG00000026664	-	100	98.086	Aotus_nancymaae
ENSMLEG00000040706	SF1	89	83.957	ENSACLG00000007633	sf1	68	73.523	Astatotilapia_calliptera
ENSMLEG00000040706	SF1	89	85.829	ENSAMXG00000003630	sf1	50	82.723	Astyanax_mexicanus
ENSMLEG00000040706	SF1	95	100.000	ENSBTAG00000001035	SF1	98	100.000	Bos_taurus
ENSMLEG00000040706	SF1	95	100.000	ENSCJAG00000002780	SF1	98	100.000	Callithrix_jacchus
ENSMLEG00000040706	SF1	95	100.000	ENSCAFG00000014239	SF1	98	100.000	Canis_familiaris
ENSMLEG00000040706	SF1	95	100.000	ENSCAFG00020014381	SF1	98	100.000	Canis_lupus_dingo
ENSMLEG00000040706	SF1	95	100.000	ENSCHIG00000025867	SF1	98	100.000	Capra_hircus
ENSMLEG00000040706	SF1	82	99.286	ENSTSYG00000033618	SF1	98	99.286	Carlito_syrichta
ENSMLEG00000040706	SF1	89	99.457	ENSCAPG00000010762	SF1	87	98.636	Cavia_aperea
ENSMLEG00000040706	SF1	95	99.522	ENSCPOG00000012290	SF1	100	99.522	Cavia_porcellus
ENSMLEG00000040706	SF1	98	85.749	ENSCCAG00000023781	-	92	85.072	Cebus_capucinus
ENSMLEG00000040706	SF1	100	98.325	ENSCCAG00000037881	SF1	100	98.325	Cebus_capucinus
ENSMLEG00000040706	SF1	99	100.000	ENSCATG00000011564	SF1	100	100.000	Cercocebus_atys
ENSMLEG00000040706	SF1	94	98.947	ENSCSAG00000007258	SF1	95	99.615	Chlorocebus_sabaeus
ENSMLEG00000040706	SF1	84	92.571	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSMLEG00000040706	SF1	90	92.000	ENSCPBG00000023763	SF1	67	83.932	Chrysemys_picta_bellii
ENSMLEG00000040706	SF1	74	67.093	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSMLEG00000040706	SF1	86	59.137	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSMLEG00000040706	SF1	100	98.086	ENSCANG00000042201	SF1	100	98.086	Colobus_angolensis_palliatus
ENSMLEG00000040706	SF1	99	97.218	ENSCGRG00001003677	Sf1	98	99.523	Cricetulus_griseus_chok1gshd
ENSMLEG00000040706	SF1	94	98.105	ENSCGRG00000001708	Sf1	97	97.905	Cricetulus_griseus_crigri
ENSMLEG00000040706	SF1	91	79.434	ENSCSEG00000014375	sf1	57	76.271	Cynoglossus_semilaevis
ENSMLEG00000040706	SF1	89	84.824	ENSCVAG00000001670	sf1	63	79.412	Cyprinodon_variegatus
ENSMLEG00000040706	SF1	91	81.250	ENSDARG00000008188	sf1	72	77.156	Danio_rerio
ENSMLEG00000040706	SF1	94	98.526	ENSDNOG00000001282	SF1	95	99.037	Dasypus_novemcinctus
ENSMLEG00000040706	SF1	99	98.148	ENSDORG00000016334	Sf1	98	100.000	Dipodomys_ordii
ENSMLEG00000040706	SF1	89	92.479	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSMLEG00000040706	SF1	94	98.526	ENSEASG00005018272	SF1	95	99.229	Equus_asinus_asinus
ENSMLEG00000040706	SF1	94	98.737	ENSECAG00000024544	SF1	95	99.422	Equus_caballus
ENSMLEG00000040706	SF1	78	99.077	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSMLEG00000040706	SF1	88	81.720	ENSELUG00000013225	sf1	55	77.176	Esox_lucius
ENSMLEG00000040706	SF1	95	100.000	ENSFCAG00000012231	SF1	98	100.000	Felis_catus
ENSMLEG00000040706	SF1	99	94.127	ENSFDAG00000009833	SF1	99	94.127	Fukomys_damarensis
ENSMLEG00000040706	SF1	91	80.260	ENSFHEG00000022656	sf1	59	77.251	Fundulus_heteroclitus
ENSMLEG00000040706	SF1	76	88.308	ENSGMOG00000007469	sf1	60	87.500	Gadus_morhua
ENSMLEG00000040706	SF1	91	83.246	ENSGAFG00000019284	sf1	78	79.616	Gambusia_affinis
ENSMLEG00000040706	SF1	92	78.228	ENSGACG00000000826	sf1	65	78.646	Gasterosteus_aculeatus
ENSMLEG00000040706	SF1	90	91.733	ENSGAGG00000021691	SF1	73	83.932	Gopherus_agassizii
ENSMLEG00000040706	SF1	90	82.245	ENSHBUG00000011598	sf1	59	78.199	Haplochromis_burtoni
ENSMLEG00000040706	SF1	95	99.841	ENSHGLG00000009541	SF1	98	99.841	Heterocephalus_glaber_female
ENSMLEG00000040706	SF1	89	100.000	ENSHGLG00100013879	-	99	88.226	Heterocephalus_glaber_male
ENSMLEG00000040706	SF1	73	93.399	ENSHGLG00100008076	-	87	87.067	Heterocephalus_glaber_male
ENSMLEG00000040706	SF1	91	87.696	ENSHGLG00100008255	-	94	85.504	Heterocephalus_glaber_male
ENSMLEG00000040706	SF1	89	80.902	ENSHCOG00000011388	sf1	59	76.429	Hippocampus_comes
ENSMLEG00000040706	SF1	89	93.973	ENSSTOG00000024353	-	85	96.667	Ictidomys_tridecemlineatus
ENSMLEG00000040706	SF1	95	100.000	ENSSTOG00000009790	-	100	100.000	Ictidomys_tridecemlineatus
ENSMLEG00000040706	SF1	95	99.841	ENSJJAG00000011788	Sf1	98	99.841	Jaculus_jaculus
ENSMLEG00000040706	SF1	91	81.795	ENSKMAG00000005854	sf1	62	78.230	Kryptolebias_marmoratus
ENSMLEG00000040706	SF1	90	81.984	ENSLBEG00000019836	sf1	64	78.043	Labrus_bergylta
ENSMLEG00000040706	SF1	89	81.818	ENSLACG00000018493	SF1	74	78.230	Latimeria_chalumnae
ENSMLEG00000040706	SF1	89	85.027	ENSLOCG00000002130	sf1	59	82.292	Lepisosteus_oculatus
ENSMLEG00000040706	SF1	99	97.222	ENSLAFG00000007201	SF1	99	97.222	Loxodonta_africana
ENSMLEG00000040706	SF1	99	100.000	ENSMFAG00000033122	SF1	99	100.000	Macaca_fascicularis
ENSMLEG00000040706	SF1	96	99.748	ENSMMUG00000022606	SF1	99	100.000	Macaca_mulatta
ENSMLEG00000040706	SF1	99	100.000	ENSMNEG00000037901	SF1	99	100.000	Macaca_nemestrina
ENSMLEG00000040706	SF1	88	82.888	ENSMAMG00000001780	sf1	58	77.724	Mastacembelus_armatus
ENSMLEG00000040706	SF1	90	81.984	ENSMZEG00005009196	sf1	59	77.962	Maylandia_zebra
ENSMLEG00000040706	SF1	95	99.204	ENSMAUG00000014064	Sf1	98	99.204	Mesocricetus_auratus
ENSMLEG00000040706	SF1	100	97.852	ENSMICG00000001202	SF1	100	97.852	Microcebus_murinus
ENSMLEG00000040706	SF1	95	99.204	ENSMOCG00000022038	Sf1	98	99.204	Microtus_ochrogaster
ENSMLEG00000040706	SF1	89	81.501	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSMLEG00000040706	SF1	90	98.118	ENSMODG00000029407	SF1	96	94.395	Monodelphis_domestica
ENSMLEG00000040706	SF1	90	81.698	ENSMALG00000020521	sf1	67	76.812	Monopterus_albus
ENSMLEG00000040706	SF1	95	99.364	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSMLEG00000040706	SF1	95	99.364	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSMLEG00000040706	SF1	95	99.364	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSMLEG00000040706	SF1	95	99.364	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSMLEG00000040706	SF1	95	99.841	ENSMPUG00000012684	SF1	98	99.841	Mustela_putorius_furo
ENSMLEG00000040706	SF1	97	98.592	ENSMLUG00000015217	-	100	98.592	Myotis_lucifugus
ENSMLEG00000040706	SF1	91	93.455	ENSMLUG00000029800	-	78	93.392	Myotis_lucifugus
ENSMLEG00000040706	SF1	95	99.682	ENSNGAG00000005550	Sf1	98	99.682	Nannospalax_galili
ENSMLEG00000040706	SF1	89	83.957	ENSNBRG00000017606	sf1	67	73.523	Neolamprologus_brichardi
ENSMLEG00000040706	SF1	100	98.086	ENSNLEG00000005236	-	100	98.086	Nomascus_leucogenys
ENSMLEG00000040706	SF1	94	97.474	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSMLEG00000040706	SF1	94	98.319	ENSOPRG00000005008	SF1	96	99.158	Ochotona_princeps
ENSMLEG00000040706	SF1	100	91.641	ENSODEG00000006102	-	100	91.641	Octodon_degus
ENSMLEG00000040706	SF1	90	82.245	ENSONIG00000015728	sf1	59	78.199	Oreochromis_niloticus
ENSMLEG00000040706	SF1	78	88.608	ENSOANG00000002909	SF1	97	87.817	Ornithorhynchus_anatinus
ENSMLEG00000040706	SF1	95	99.841	ENSOCUG00000026486	SF1	99	99.841	Oryctolagus_cuniculus
ENSMLEG00000040706	SF1	89	81.432	ENSORLG00000011853	sf1	61	74.253	Oryzias_latipes
ENSMLEG00000040706	SF1	89	81.432	ENSORLG00020011834	sf1	61	74.253	Oryzias_latipes_hni
ENSMLEG00000040706	SF1	89	80.902	ENSORLG00015012855	sf1	61	74.023	Oryzias_latipes_hsok
ENSMLEG00000040706	SF1	89	82.228	ENSOMEG00000005210	sf1	64	73.661	Oryzias_melastigma
ENSMLEG00000040706	SF1	100	94.985	ENSOGAG00000016196	SF1	98	99.841	Otolemur_garnettii
ENSMLEG00000040706	SF1	91	98.153	ENSOARG00000009166	SF1	98	92.679	Ovis_aries
ENSMLEG00000040706	SF1	98	99.510	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSMLEG00000040706	SF1	95	100.000	ENSPPRG00000013566	SF1	100	100.000	Panthera_pardus
ENSMLEG00000040706	SF1	89	99.729	ENSPTIG00000016141	SF1	91	100.000	Panthera_tigris_altaica
ENSMLEG00000040706	SF1	100	98.086	ENSPTRG00000003846	SF1	100	98.086	Pan_troglodytes
ENSMLEG00000040706	SF1	99	100.000	ENSPANG00000020754	SF1	100	100.000	Papio_anubis
ENSMLEG00000040706	SF1	76	78.834	ENSPKIG00000012116	sf1	89	73.775	Paramormyrops_kingsleyae
ENSMLEG00000040706	SF1	69	87.179	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSMLEG00000040706	SF1	99	97.227	ENSPEMG00000010463	Sf1	98	99.363	Peromyscus_maniculatus_bairdii
ENSMLEG00000040706	SF1	81	72.107	ENSPMAG00000008272	sf1	53	66.488	Petromyzon_marinus
ENSMLEG00000040706	SF1	95	98.887	ENSPCIG00000018173	SF1	99	98.887	Phascolarctos_cinereus
ENSMLEG00000040706	SF1	91	83.905	ENSPFOG00000013683	sf1	68	79.475	Poecilia_formosa
ENSMLEG00000040706	SF1	91	82.338	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSMLEG00000040706	SF1	91	82.338	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSMLEG00000040706	SF1	91	81.818	ENSPREG00000004155	sf1	66	72.845	Poecilia_reticulata
ENSMLEG00000040706	SF1	95	99.841	ENSPPYG00000003098	-	98	99.841	Pongo_abelii
ENSMLEG00000040706	SF1	94	98.316	ENSPCAG00000013631	SF1	79	97.180	Procavia_capensis
ENSMLEG00000040706	SF1	100	98.091	ENSPCOG00000027546	SF1	100	98.091	Propithecus_coquereli
ENSMLEG00000040706	SF1	94	98.526	ENSPVAG00000016938	SF1	79	97.727	Pteropus_vampyrus
ENSMLEG00000040706	SF1	89	82.415	ENSPNYG00000004673	sf1	59	77.962	Pundamilia_nyererei
ENSMLEG00000040706	SF1	89	85.600	ENSPNAG00000013072	sf1	64	75.506	Pygocentrus_nattereri
ENSMLEG00000040706	SF1	100	97.024	ENSRNOG00000021085	Sf1	98	99.364	Rattus_norvegicus
ENSMLEG00000040706	SF1	100	93.062	ENSRBIG00000042818	SF1	98	95.866	Rhinopithecus_bieti
ENSMLEG00000040706	SF1	100	99.759	ENSRROG00000045655	SF1	100	99.759	Rhinopithecus_roxellana
ENSMLEG00000040706	SF1	70	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSMLEG00000040706	SF1	99	79.137	ENSSBOG00000022267	-	99	80.048	Saimiri_boliviensis_boliviensis
ENSMLEG00000040706	SF1	90	92.632	ENSSHAG00000006841	SF1	75	93.187	Sarcophilus_harrisii
ENSMLEG00000040706	SF1	91	81.347	ENSSFOG00015021978	sf1	58	78.049	Scleropages_formosus
ENSMLEG00000040706	SF1	89	79.841	ENSSMAG00000007549	sf1	63	76.235	Scophthalmus_maximus
ENSMLEG00000040706	SF1	89	80.739	ENSSDUG00000003903	sf1	61	76.794	Seriola_dumerili
ENSMLEG00000040706	SF1	88	81.283	ENSSLDG00000013075	sf1	59	76.998	Seriola_lalandi_dorsalis
ENSMLEG00000040706	SF1	90	96.923	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSMLEG00000040706	SF1	86	92.416	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSMLEG00000040706	SF1	90	81.039	ENSSPAG00000019060	sf1	57	78.481	Stegastes_partitus
ENSMLEG00000040706	SF1	95	99.841	ENSSSCG00000013021	SF1	100	99.809	Sus_scrofa
ENSMLEG00000040706	SF1	92	70.483	ENSTNIG00000004820	sf1	78	69.305	Tetraodon_nigroviridis
ENSMLEG00000040706	SF1	89	91.304	ENSTBEG00000013133	SF1	81	100.000	Tupaia_belangeri
ENSMLEG00000040706	SF1	93	94.444	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSMLEG00000040706	SF1	83	94.749	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSMLEG00000040706	SF1	89	99.729	ENSUMAG00000007268	SF1	93	99.768	Ursus_maritimus
ENSMLEG00000040706	SF1	66	100.000	ENSVPAG00000011912	SF1	66	99.602	Vicugna_pacos
ENSMLEG00000040706	SF1	94	98.947	ENSVVUG00000028585	SF1	95	99.615	Vulpes_vulpes
ENSMLEG00000040706	SF1	92	84.496	ENSXETG00000008434	sf1	68	81.752	Xenopus_tropicalis
ENSMLEG00000040706	SF1	88	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSMLEG00000040706	SF1	91	81.606	ENSXMAG00000007822	sf1	69	73.548	Xiphophorus_maculatus