EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000041096 (Gene tree)
Gene ID: 105529966
Gene Symbol: CHD1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 51075 bases
Position: chrKN979158.1:884123-935197
Accession: 105529966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000033959	ResIII	PF04851.15	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000057545	CHD1-201	4914	XM_011967257	ENSMLEP00000033959	1637 (aa)	XP_011822647	A0A2K6A1M7

Gene Model

Click here to download ENSMLEG00000041096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000041096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000041096	CHD1	96	54.169	ENSMLEG00000035026	-	87	68.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000041096	CHD1	99	95.688	ENSG00000153922	CHD1	99	95.275	Homo_sapiens
ENSMLEG00000041096	CHD1	66	76.923	ENSAPOG00000005764	chd1	97	77.237	Acanthochromis_polyacanthus
ENSMLEG00000041096	CHD1	89	73.220	ENSAOCG00000023105	chd1	94	73.155	Amphiprion_ocellaris
ENSMLEG00000041096	CHD1	89	74.413	ENSAPEG00000013544	chd1	94	74.347	Amphiprion_percula
ENSMLEG00000041096	CHD1	90	73.715	ENSATEG00000010676	chd1	92	73.458	Anabas_testudineus
ENSMLEG00000041096	CHD1	70	77.549	ENSAMXG00000010843	chd1	91	77.104	Astyanax_mexicanus
ENSMLEG00000041096	CHD1	99	96.452	ENSCATG00000032035	CHD1	100	96.038	Cercocebus_atys
ENSMLEG00000041096	CHD1	99	96.047	ENSCSAG00000015339	CHD1	99	95.634	Chlorocebus_sabaeus
ENSMLEG00000041096	CHD1	58	85.358	ENSCPBG00000015831	CHD1	99	87.119	Chrysemys_picta_bellii
ENSMLEG00000041096	CHD1	100	94.281	ENSCANG00000036916	CHD1	100	93.868	Colobus_angolensis_palliatus
ENSMLEG00000041096	CHD1	99	91.701	ENSCGRG00001023943	Chd1	96	91.667	Cricetulus_griseus_chok1gshd
ENSMLEG00000041096	CHD1	97	91.667	ENSCGRG00000008652	Chd1	96	91.667	Cricetulus_griseus_crigri
ENSMLEG00000041096	CHD1	89	71.932	ENSCSEG00000009553	chd1	95	71.832	Cynoglossus_semilaevis
ENSMLEG00000041096	CHD1	92	85.090	ENSEASG00005016110	CHD1	99	92.505	Equus_asinus_asinus
ENSMLEG00000041096	CHD1	89	74.160	ENSELUG00000017677	chd1	93	74.241	Esox_lucius
ENSMLEG00000041096	CHD1	71	76.610	ENSFHEG00000021164	chd1	87	77.124	Fundulus_heteroclitus
ENSMLEG00000041096	CHD1	96	73.050	ENSGMOG00000001537	chd1	96	63.443	Gadus_morhua
ENSMLEG00000041096	CHD1	92	85.468	ENSGALG00000031327	-	96	85.596	Gallus_gallus
ENSMLEG00000041096	CHD1	84	74.834	ENSGAFG00000019880	chd1	92	74.400	Gambusia_affinis
ENSMLEG00000041096	CHD1	100	91.838	ENSGGOG00000011463	CHD1	100	91.838	Gorilla_gorilla
ENSMLEG00000041096	CHD1	88	75.398	ENSHCOG00000014222	chd1	91	75.184	Hippocampus_comes
ENSMLEG00000041096	CHD1	87	77.763	ENSIPUG00000001369	chd1	95	75.130	Ictalurus_punctatus
ENSMLEG00000041096	CHD1	61	88.649	ENSLAFG00000023183	CHD1	99	88.649	Loxodonta_africana
ENSMLEG00000041096	CHD1	100	96.344	ENSMFAG00000031226	CHD1	100	95.932	Macaca_fascicularis
ENSMLEG00000041096	CHD1	82	94.512	ENSMMUG00000014090	CHD1	98	94.512	Macaca_mulatta
ENSMLEG00000041096	CHD1	100	96.344	ENSMNEG00000045073	CHD1	100	95.932	Macaca_nemestrina
ENSMLEG00000041096	CHD1	72	75.726	ENSMZEG00005010957	chd1	94	74.860	Maylandia_zebra
ENSMLEG00000041096	CHD1	97	88.929	ENSMOCG00000019121	Chd1	96	88.869	Microtus_ochrogaster
ENSMLEG00000041096	CHD1	78	73.495	ENSMALG00000013317	chd1	95	72.794	Monopterus_albus
ENSMLEG00000041096	CHD1	97	89.909	MGP_CAROLIEiJ_G0021099	Chd1	96	90.942	Mus_caroli
ENSMLEG00000041096	CHD1	97	90.334	ENSMUSG00000023852	Chd1	96	91.368	Mus_musculus
ENSMLEG00000041096	CHD1	97	90.456	MGP_PahariEiJ_G0023414	Chd1	96	90.638	Mus_pahari
ENSMLEG00000041096	CHD1	89	72.229	ENSNBRG00000006860	chd1	91	73.262	Neolamprologus_brichardi
ENSMLEG00000041096	CHD1	100	92.528	ENSNLEG00000014493	CHD1	100	92.528	Nomascus_leucogenys
ENSMLEG00000041096	CHD1	97	88.200	ENSOANG00000004891	CHD1	100	87.304	Ornithorhynchus_anatinus
ENSMLEG00000041096	CHD1	58	71.937	ENSORLG00015016725	chd1	93	70.080	Oryzias_latipes_hsok
ENSMLEG00000041096	CHD1	100	94.259	ENSPPAG00000043367	CHD1	100	93.849	Pan_paniscus
ENSMLEG00000041096	CHD1	100	95.471	ENSPTRG00000017103	CHD1	100	95.059	Pan_troglodytes
ENSMLEG00000041096	CHD1	100	96.344	ENSPANG00000006387	CHD1	100	95.932	Papio_anubis
ENSMLEG00000041096	CHD1	96	70.803	ENSPKIG00000024719	chd1	92	79.651	Paramormyrops_kingsleyae
ENSMLEG00000041096	CHD1	72	76.806	ENSPMGG00000005785	chd1	93	76.003	Periophthalmus_magnuspinnatus
ENSMLEG00000041096	CHD1	97	91.672	ENSPEMG00000015939	Chd1	96	91.550	Peromyscus_maniculatus_bairdii
ENSMLEG00000041096	CHD1	97	70.776	ENSPREG00000004209	chd1	97	70.652	Poecilia_reticulata
ENSMLEG00000041096	CHD1	79	90.748	ENSRNOG00000014434	Chd1	95	90.600	Rattus_norvegicus
ENSMLEG00000041096	CHD1	100	93.071	ENSRBIG00000044325	CHD1	100	92.689	Rhinopithecus_bieti
ENSMLEG00000041096	CHD1	99	95.979	ENSRROG00000001726	CHD1	100	95.565	Rhinopithecus_roxellana
ENSMLEG00000041096	CHD1	71	78.743	ENSSFOG00015007161	chd1	90	77.183	Scleropages_formosus
ENSMLEG00000041096	CHD1	79	73.618	ENSSDUG00000018314	chd1	87	75.621	Seriola_dumerili
ENSMLEG00000041096	CHD1	50	77.221	ENSSLDG00000017244	chd1	84	77.370	Seriola_lalandi_dorsalis
ENSMLEG00000041096	CHD1	79	73.801	ENSSPAG00000007024	chd1	88	76.164	Stegastes_partitus
ENSMLEG00000041096	CHD1	85	93.548	ENSSSCG00000014177	CHD1	99	93.548	Sus_scrofa
ENSMLEG00000041096	CHD1	90	72.276	ENSTRUG00000010282	chd1	96	69.589	Takifugu_rubripes
ENSMLEG00000041096	CHD1	71	73.241	ENSTNIG00000007101	chd1	95	71.944	Tetraodon_nigroviridis
ENSMLEG00000041096	CHD1	97	68.724	ENSXCOG00000017184	chd1	97	68.488	Xiphophorus_couchianus
ENSMLEG00000041096	CHD1	76	73.552	ENSXMAG00000014538	chd1	95	73.559	Xiphophorus_maculatus