EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000041158 (Gene tree)
Gene ID: 105553355
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 12373 bases
Position: chrKN978161.1:352519-364891
Accession: 105553355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000033978	RRM_1	PF00076.22	5.7e-06	1	1
ENSMLEP00000033971	RRM_1	PF00076.22	1.1e-05	1	1
ENSMLEP00000033958	RRM_1	PF00076.22	1.8e-05	1	1
ENSMLEP00000033967	RRM_1	PF00076.22	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000057557	RDM1-203	799	XM_011999403	ENSMLEP00000033971	166 (aa)	XP_011854793	A0A2K6A1M6
ENSMLET00000057553	RDM1-202	1153	XM_011999401	ENSMLEP00000033967	284 (aa)	XP_011854791	A0A2K6A1N8
ENSMLET00000057564	RDM1-204	1000	XM_011999405	ENSMLEP00000033978	118 (aa)	XP_011854795	A0A2K6A1T0
ENSMLET00000057544	RDM1-201	1072	XM_011999402	ENSMLEP00000033958	251 (aa)	XP_011854792	A0A2K6A1R0

Gene Model

Click here to download ENSMLEG00000041158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000041158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000041158	RDM1	100	96.386	ENSG00000278023	RDM1	100	97.015	Homo_sapiens
ENSMLEG00000041158	RDM1	86	48.077	ENSAPOG00000021886	zgc:103564	84	35.217	Acanthochromis_polyacanthus
ENSMLEG00000041158	RDM1	56	81.818	ENSAMEG00000019542	-	97	81.818	Ailuropoda_melanoleuca
ENSMLEG00000041158	RDM1	86	48.544	ENSAPEG00000008929	zgc:103564	92	34.127	Amphiprion_percula
ENSMLEG00000041158	RDM1	91	66.972	ENSAPLG00000004384	RDM1	94	53.441	Anas_platyrhynchos
ENSMLEG00000041158	RDM1	86	62.376	ENSACAG00000012989	-	100	49.822	Anolis_carolinensis
ENSMLEG00000041158	RDM1	100	92.771	ENSANAG00000032752	RDM1	100	92.771	Aotus_nancymaae
ENSMLEG00000041158	RDM1	100	89.630	ENSBTAG00000000030	RDM1	100	80.351	Bos_taurus
ENSMLEG00000041158	RDM1	95	91.964	ENSCJAG00000015031	RDM1	97	93.333	Callithrix_jacchus
ENSMLEG00000041158	RDM1	90	82.075	ENSCAFG00000015160	-	100	74.609	Canis_familiaris
ENSMLEG00000041158	RDM1	98	88.148	ENSCHIG00000020607	RDM1	100	80.142	Capra_hircus
ENSMLEG00000041158	RDM1	100	70.070	ENSCPOG00000001495	-	99	70.070	Cavia_porcellus
ENSMLEG00000041158	RDM1	96	89.338	ENSCCAG00000035763	RDM1	100	91.791	Cebus_capucinus
ENSMLEG00000041158	RDM1	100	100.000	ENSCATG00000044451	RDM1	100	100.000	Cercocebus_atys
ENSMLEG00000041158	RDM1	95	99.107	ENSCSAG00000006209	RDM1	100	93.985	Chlorocebus_sabaeus
ENSMLEG00000041158	RDM1	87	70.874	ENSCPBG00000009105	RDM1	93	55.510	Chrysemys_picta_bellii
ENSMLEG00000041158	RDM1	100	97.590	ENSCANG00000041322	RDM1	100	97.590	Colobus_angolensis_palliatus
ENSMLEG00000041158	RDM1	95	77.391	ENSCGRG00001015927	Rdm1	99	74.912	Cricetulus_griseus_chok1gshd
ENSMLEG00000041158	RDM1	85	43.137	ENSCVAG00000001956	zgc:103564	96	36.330	Cyprinodon_variegatus
ENSMLEG00000041158	RDM1	93	83.636	ENSDNOG00000045224	-	94	81.818	Dasypus_novemcinctus
ENSMLEG00000041158	RDM1	90	90.566	ENSEASG00005010554	RDM1	69	81.443	Equus_asinus_asinus
ENSMLEG00000041158	RDM1	90	89.623	ENSECAG00000022182	RDM1	91	81.961	Equus_caballus
ENSMLEG00000041158	RDM1	86	82.178	ENSEEUG00000006127	RDM1	100	73.413	Erinaceus_europaeus
ENSMLEG00000041158	RDM1	100	77.686	ENSFCAG00000043429	RDM1	97	86.667	Felis_catus
ENSMLEG00000041158	RDM1	86	67.327	ENSGALG00000000243	RDM1	97	55.235	Gallus_gallus
ENSMLEG00000041158	RDM1	86	72.277	ENSGAGG00000000293	-	78	54.618	Gopherus_agassizii
ENSMLEG00000041158	RDM1	100	96.988	ENSGGOG00000010584	RDM1	100	97.015	Gorilla_gorilla
ENSMLEG00000041158	RDM1	99	35.336	ENSHCOG00000002518	-	97	35.336	Hippocampus_comes
ENSMLEG00000041158	RDM1	100	87.407	ENSSTOG00000022491	RDM1	100	83.099	Ictidomys_tridecemlineatus
ENSMLEG00000041158	RDM1	100	79.021	ENSLAFG00000029300	RDM1	100	79.021	Loxodonta_africana
ENSMLEG00000041158	RDM1	100	100.000	ENSMFAG00000032968	RDM1	100	100.000	Macaca_fascicularis
ENSMLEG00000041158	RDM1	100	100.000	ENSMMUG00000006847	RDM1	100	100.000	Macaca_mulatta
ENSMLEG00000041158	RDM1	100	100.000	ENSMNEG00000039977	RDM1	100	100.000	Macaca_nemestrina
ENSMLEG00000041158	RDM1	91	63.636	ENSMGAG00000008774	RDM1	96	55.918	Meleagris_gallopavo
ENSMLEG00000041158	RDM1	99	80.000	ENSMAUG00000018559	Rdm1	99	74.296	Mesocricetus_auratus
ENSMLEG00000041158	RDM1	100	91.852	ENSMICG00000038651	RDM1	100	90.580	Microcebus_murinus
ENSMLEG00000041158	RDM1	95	74.783	ENSMOCG00000015095	Rdm1	99	69.928	Microtus_ochrogaster
ENSMLEG00000041158	RDM1	94	71.930	ENSMODG00000011101	RDM1	100	63.768	Monodelphis_domestica
ENSMLEG00000041158	RDM1	95	81.739	MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	Mus_caroli
ENSMLEG00000041158	RDM1	95	80.870	ENSMUSG00000010362	Rdm1	99	73.929	Mus_musculus
ENSMLEG00000041158	RDM1	99	83.704	MGP_PahariEiJ_G0018356	Rdm1	99	73.944	Mus_pahari
ENSMLEG00000041158	RDM1	95	80.000	MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	Mus_spretus
ENSMLEG00000041158	RDM1	100	88.148	ENSMPUG00000008363	RDM1	100	81.119	Mustela_putorius_furo
ENSMLEG00000041158	RDM1	100	96.386	ENSNLEG00000014173	RDM1	100	96.386	Nomascus_leucogenys
ENSMLEG00000041158	RDM1	94	69.298	ENSMEUG00000015826	RDM1	95	67.797	Notamacropus_eugenii
ENSMLEG00000041158	RDM1	95	80.870	ENSOCUG00000022704	RDM1	99	76.894	Oryctolagus_cuniculus
ENSMLEG00000041158	RDM1	100	85.185	ENSOGAG00000011332	RDM1	100	83.451	Otolemur_garnettii
ENSMLEG00000041158	RDM1	100	97.037	ENSPPAG00000029969	RDM1	100	96.127	Pan_paniscus
ENSMLEG00000041158	RDM1	100	97.590	ENSPTRG00000009031	RDM1	100	97.761	Pan_troglodytes
ENSMLEG00000041158	RDM1	100	99.398	ENSPANG00000022933	RDM1	100	99.398	Papio_anubis
ENSMLEG00000041158	RDM1	95	76.522	ENSPEMG00000018985	Rdm1	99	73.239	Peromyscus_maniculatus_bairdii
ENSMLEG00000041158	RDM1	100	95.556	ENSPPYG00000008198	RDM1	100	94.718	Pongo_abelii
ENSMLEG00000041158	RDM1	100	86.667	ENSPCOG00000017995	RDM1	100	85.542	Propithecus_coquereli
ENSMLEG00000041158	RDM1	95	83.478	ENSPVAG00000001116	RDM1	100	84.861	Pteropus_vampyrus
ENSMLEG00000041158	RDM1	95	80.000	ENSRNOG00000020751	Rdm1	99	73.571	Rattus_norvegicus
ENSMLEG00000041158	RDM1	100	98.795	ENSRBIG00000030000	RDM1	100	98.795	Rhinopithecus_bieti
ENSMLEG00000041158	RDM1	100	100.000	ENSRROG00000035242	RDM1	100	100.000	Rhinopithecus_roxellana
ENSMLEG00000041158	RDM1	97	66.304	ENSSHAG00000013584	RDM1	100	66.304	Sarcophilus_harrisii
ENSMLEG00000041158	RDM1	93	63.636	ENSSPUG00000010941	RDM1	94	53.962	Sphenodon_punctatus
ENSMLEG00000041158	RDM1	83	50.962	ENSSPAG00000011690	-	95	36.981	Stegastes_partitus
ENSMLEG00000041158	RDM1	87	72.642	ENSSSCG00000017574	-	93	72.321	Sus_scrofa
ENSMLEG00000041158	RDM1	86	85.149	ENSTBEG00000010030	RDM1	99	63.095	Tupaia_belangeri
ENSMLEG00000041158	RDM1	100	88.148	ENSUAMG00000027279	RDM1	100	82.746	Ursus_americanus
ENSMLEG00000041158	RDM1	100	88.148	ENSUMAG00000015423	RDM1	98	82.746	Ursus_maritimus