EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000041192 (Gene tree)
Gene ID: 105548639
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 44791 bases
Position: chrKN976441.1:600184-644974
Accession: 105548639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000034075	EST1	PF10374.9	9.5e-16	1	1
ENSMLEP00000034075	EST1_DNA_bind	PF10373.9	3e-38	1	1
ENSMLEP00000034075	PIN_4	PF13638.6	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000057661	SMG5-201	2958	XM_011992755	ENSMLEP00000034075	985 (aa)	XP_011848145	A0A2K6A1Y6

Gene Model

Click here to download ENSMLEG00000041192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000041192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000041192	SMG5	100	92.941	ENSG00000198952	SMG5	100	92.941	Homo_sapiens
ENSMLEG00000041192	SMG5	99	62.207	ENSAPOG00000019690	smg5	93	67.523	Acanthochromis_polyacanthus
ENSMLEG00000041192	SMG5	98	86.158	ENSAMEG00000014458	SMG5	100	86.158	Ailuropoda_melanoleuca
ENSMLEG00000041192	SMG5	99	60.019	ENSACIG00000001353	smg5	99	61.435	Amphilophus_citrinellus
ENSMLEG00000041192	SMG5	98	59.372	ENSAOCG00000019483	smg5	93	68.396	Amphiprion_ocellaris
ENSMLEG00000041192	SMG5	98	61.089	ENSAPEG00000022949	smg5	93	68.160	Amphiprion_percula
ENSMLEG00000041192	SMG5	99	60.649	ENSATEG00000005348	smg5	99	61.932	Anabas_testudineus
ENSMLEG00000041192	SMG5	98	72.983	ENSAPLG00000010263	SMG5	100	72.692	Anas_platyrhynchos
ENSMLEG00000041192	SMG5	100	91.961	ENSANAG00000032899	SMG5	100	91.961	Aotus_nancymaae
ENSMLEG00000041192	SMG5	99	59.847	ENSACLG00000009311	smg5	99	60.786	Astatotilapia_calliptera
ENSMLEG00000041192	SMG5	92	68.558	ENSAMXG00000024616	smg5	99	57.414	Astyanax_mexicanus
ENSMLEG00000041192	SMG5	100	89.804	ENSBTAG00000009435	SMG5	100	89.804	Bos_taurus
ENSMLEG00000041192	SMG5	99	40.905	ENSBTAG00000021747	-	99	40.231	Bos_taurus
ENSMLEG00000041192	SMG5	100	91.961	ENSCJAG00000005684	SMG5	100	91.961	Callithrix_jacchus
ENSMLEG00000041192	SMG5	100	88.333	ENSCAFG00000016839	SMG5	100	88.333	Canis_familiaris
ENSMLEG00000041192	SMG5	100	88.333	ENSCAFG00020006061	SMG5	100	88.333	Canis_lupus_dingo
ENSMLEG00000041192	SMG5	99	40.905	ENSCHIG00000006323	-	99	39.864	Capra_hircus
ENSMLEG00000041192	SMG5	100	89.706	ENSCHIG00000007709	SMG5	100	89.706	Capra_hircus
ENSMLEG00000041192	SMG5	100	90.891	ENSTSYG00000004099	SMG5	100	89.716	Carlito_syrichta
ENSMLEG00000041192	SMG5	81	83.437	ENSCAPG00000003631	SMG5	87	82.447	Cavia_aperea
ENSMLEG00000041192	SMG5	100	89.432	ENSCPOG00000015696	SMG5	100	89.824	Cavia_porcellus
ENSMLEG00000041192	SMG5	100	91.961	ENSCCAG00000027409	SMG5	100	91.961	Cebus_capucinus
ENSMLEG00000041192	SMG5	100	95.652	ENSCATG00000030539	SMG5	100	95.652	Cercocebus_atys
ENSMLEG00000041192	SMG5	100	89.530	ENSCLAG00000003983	SMG5	100	89.922	Chinchilla_lanigera
ENSMLEG00000041192	SMG5	100	93.529	ENSCSAG00000002120	SMG5	100	93.529	Chlorocebus_sabaeus
ENSMLEG00000041192	SMG5	53	86.331	ENSCHOG00000008741	-	57	86.331	Choloepus_hoffmanni
ENSMLEG00000041192	SMG5	95	74.210	ENSCPBG00000025848	SMG5	99	73.904	Chrysemys_picta_bellii
ENSMLEG00000041192	SMG5	93	31.963	ENSCING00000008706	-	99	31.971	Ciona_intestinalis
ENSMLEG00000041192	SMG5	100	89.216	ENSCANG00000029208	SMG5	100	89.216	Colobus_angolensis_palliatus
ENSMLEG00000041192	SMG5	100	86.301	ENSCGRG00001006336	Smg5	100	86.301	Cricetulus_griseus_chok1gshd
ENSMLEG00000041192	SMG5	98	86.172	ENSCGRG00000005111	Smg5	100	86.158	Cricetulus_griseus_crigri
ENSMLEG00000041192	SMG5	99	60.116	ENSCSEG00000014220	smg5	92	68.085	Cynoglossus_semilaevis
ENSMLEG00000041192	SMG5	99	55.631	ENSCVAG00000000529	smg5	99	56.341	Cyprinodon_variegatus
ENSMLEG00000041192	SMG5	93	69.267	ENSDARG00000041481	smg5	99	57.848	Danio_rerio
ENSMLEG00000041192	SMG5	100	85.588	ENSDNOG00000000051	SMG5	100	85.588	Dasypus_novemcinctus
ENSMLEG00000041192	SMG5	92	34.255	ENSDNOG00000039862	-	100	32.595	Dasypus_novemcinctus
ENSMLEG00000041192	SMG5	100	87.573	ENSDORG00000010382	Smg5	100	87.378	Dipodomys_ordii
ENSMLEG00000041192	SMG5	82	97.087	ENSETEG00000010336	SMG5	78	97.087	Echinops_telfairi
ENSMLEG00000041192	SMG5	90	43.422	ENSEBUG00000003739	smg5	98	43.069	Eptatretus_burgeri
ENSMLEG00000041192	SMG5	100	90.784	ENSEASG00005019122	SMG5	100	90.784	Equus_asinus_asinus
ENSMLEG00000041192	SMG5	100	90.784	ENSECAG00000001389	SMG5	100	90.784	Equus_caballus
ENSMLEG00000041192	SMG5	71	90.181	ENSEEUG00000012690	SMG5	73	90.130	Erinaceus_europaeus
ENSMLEG00000041192	SMG5	99	59.923	ENSELUG00000012585	smg5	99	59.827	Esox_lucius
ENSMLEG00000041192	SMG5	100	87.647	ENSFCAG00000011783	SMG5	100	87.659	Felis_catus
ENSMLEG00000041192	SMG5	57	74.958	ENSFALG00000001166	-	99	75.042	Ficedula_albicollis
ENSMLEG00000041192	SMG5	97	86.861	ENSFDAG00000017388	SMG5	100	86.660	Fukomys_damarensis
ENSMLEG00000041192	SMG5	95	60.084	ENSFHEG00000013939	smg5	93	61.589	Fundulus_heteroclitus
ENSMLEG00000041192	SMG5	99	56.780	ENSGMOG00000007310	smg5	92	66.972	Gadus_morhua
ENSMLEG00000041192	SMG5	99	72.238	ENSGALG00000029918	-	100	72.011	Gallus_gallus
ENSMLEG00000041192	SMG5	93	66.290	ENSGAFG00000021691	smg5	95	67.412	Gambusia_affinis
ENSMLEG00000041192	SMG5	91	66.900	ENSGACG00000013142	smg5	99	56.205	Gasterosteus_aculeatus
ENSMLEG00000041192	SMG5	100	73.605	ENSGAGG00000016131	SMG5	100	73.415	Gopherus_agassizii
ENSMLEG00000041192	SMG5	100	92.941	ENSGGOG00000010932	SMG5	100	92.941	Gorilla_gorilla
ENSMLEG00000041192	SMG5	93	65.463	ENSHBUG00000008654	smg5	99	60.000	Haplochromis_burtoni
ENSMLEG00000041192	SMG5	100	86.693	ENSHGLG00000019152	SMG5	100	86.888	Heterocephalus_glaber_female
ENSMLEG00000041192	SMG5	89	86.041	ENSHGLG00100015948	SMG5	99	86.260	Heterocephalus_glaber_male
ENSMLEG00000041192	SMG5	85	63.325	ENSHCOG00000010229	smg5	83	78.571	Hippocampus_comes
ENSMLEG00000041192	SMG5	99	56.549	ENSIPUG00000006624	Smg5	99	57.130	Ictalurus_punctatus
ENSMLEG00000041192	SMG5	100	90.000	ENSSTOG00000001780	SMG5	100	90.000	Ictidomys_tridecemlineatus
ENSMLEG00000041192	SMG5	100	86.413	ENSJJAG00000022763	Smg5	100	86.804	Jaculus_jaculus
ENSMLEG00000041192	SMG5	92	66.136	ENSKMAG00000014586	smg5	99	56.510	Kryptolebias_marmoratus
ENSMLEG00000041192	SMG5	99	61.058	ENSLBEG00000002145	smg5	99	61.079	Labrus_bergylta
ENSMLEG00000041192	SMG5	100	59.508	ENSLACG00000010521	SMG5	100	59.413	Latimeria_chalumnae
ENSMLEG00000041192	SMG5	96	69.014	ENSLOCG00000008380	smg5	92	68.957	Lepisosteus_oculatus
ENSMLEG00000041192	SMG5	100	88.235	ENSLAFG00000006241	SMG5	100	88.235	Loxodonta_africana
ENSMLEG00000041192	SMG5	100	93.529	ENSMFAG00000045357	SMG5	100	93.529	Macaca_fascicularis
ENSMLEG00000041192	SMG5	100	93.431	ENSMMUG00000000090	SMG5	100	93.431	Macaca_mulatta
ENSMLEG00000041192	SMG5	100	93.431	ENSMNEG00000044425	SMG5	100	93.431	Macaca_nemestrina
ENSMLEG00000041192	SMG5	99	56.000	ENSMAMG00000010683	smg5	92	69.031	Mastacembelus_armatus
ENSMLEG00000041192	SMG5	64	56.418	ENSMZEG00005016543	smg5	100	56.972	Maylandia_zebra
ENSMLEG00000041192	SMG5	99	58.270	ENSMZEG00005015815	smg5	99	59.221	Maylandia_zebra
ENSMLEG00000041192	SMG5	100	85.616	ENSMAUG00000010381	Smg5	100	85.616	Mesocricetus_auratus
ENSMLEG00000041192	SMG5	100	91.078	ENSMICG00000002257	SMG5	100	91.078	Microcebus_murinus
ENSMLEG00000041192	SMG5	100	85.840	ENSMOCG00000016590	Smg5	100	85.254	Microtus_ochrogaster
ENSMLEG00000041192	SMG5	99	54.230	ENSMMOG00000017199	smg5	99	54.960	Mola_mola
ENSMLEG00000041192	SMG5	97	32.438	ENSMODG00000004511	-	99	31.615	Monodelphis_domestica
ENSMLEG00000041192	SMG5	78	35.768	ENSMODG00000010675	-	84	35.696	Monodelphis_domestica
ENSMLEG00000041192	SMG5	87	82.960	ENSMODG00000016901	SMG5	98	83.408	Monodelphis_domestica
ENSMLEG00000041192	SMG5	79	36.150	ENSMODG00000004735	-	86	37.166	Monodelphis_domestica
ENSMLEG00000041192	SMG5	93	34.474	ENSMODG00000004532	-	83	35.092	Monodelphis_domestica
ENSMLEG00000041192	SMG5	99	55.979	ENSMALG00000010375	smg5	99	54.867	Monopterus_albus
ENSMLEG00000041192	SMG5	100	86.399	MGP_CAROLIEiJ_G0025163	Smg5	100	86.204	Mus_caroli
ENSMLEG00000041192	SMG5	100	86.595	ENSMUSG00000001415	Smg5	100	86.399	Mus_musculus
ENSMLEG00000041192	SMG5	100	86.217	MGP_PahariEiJ_G0026606	Smg5	100	86.706	Mus_pahari
ENSMLEG00000041192	SMG5	100	86.399	MGP_SPRETEiJ_G0026104	Smg5	100	86.204	Mus_spretus
ENSMLEG00000041192	SMG5	95	88.466	ENSMPUG00000004546	SMG5	99	87.831	Mustela_putorius_furo
ENSMLEG00000041192	SMG5	100	88.791	ENSMLUG00000008518	SMG5	100	88.109	Myotis_lucifugus
ENSMLEG00000041192	SMG5	98	41.118	ENSNGAG00000012101	-	98	41.264	Nannospalax_galili
ENSMLEG00000041192	SMG5	100	87.267	ENSNGAG00000020706	Smg5	100	87.659	Nannospalax_galili
ENSMLEG00000041192	SMG5	97	58.492	ENSNBRG00000004332	smg5	98	59.215	Neolamprologus_brichardi
ENSMLEG00000041192	SMG5	100	92.843	ENSNLEG00000012439	SMG5	100	92.843	Nomascus_leucogenys
ENSMLEG00000041192	SMG5	100	82.076	ENSMEUG00000012834	SMG5	100	81.195	Notamacropus_eugenii
ENSMLEG00000041192	SMG5	100	88.224	ENSOPRG00000009152	SMG5	100	88.224	Ochotona_princeps
ENSMLEG00000041192	SMG5	100	89.412	ENSODEG00000012237	SMG5	100	89.412	Octodon_degus
ENSMLEG00000041192	SMG5	93	65.463	ENSONIG00000008632	smg5	99	56.372	Oreochromis_niloticus
ENSMLEG00000041192	SMG5	98	89.056	ENSOCUG00000012886	SMG5	100	89.056	Oryctolagus_cuniculus
ENSMLEG00000041192	SMG5	89	37.582	ENSOCUG00000023338	-	99	37.473	Oryctolagus_cuniculus
ENSMLEG00000041192	SMG5	91	67.143	ENSORLG00000016239	smg5	99	57.194	Oryzias_latipes
ENSMLEG00000041192	SMG5	99	59.223	ENSORLG00020013127	smg5	99	60.621	Oryzias_latipes_hni
ENSMLEG00000041192	SMG5	99	58.955	ENSORLG00015019014	smg5	99	60.445	Oryzias_latipes_hsok
ENSMLEG00000041192	SMG5	100	89.020	ENSOGAG00000004966	SMG5	100	89.020	Otolemur_garnettii
ENSMLEG00000041192	SMG5	100	89.804	ENSOARG00000005778	SMG5	100	89.804	Ovis_aries
ENSMLEG00000041192	SMG5	99	40.874	ENSOARG00000011963	-	99	39.981	Ovis_aries
ENSMLEG00000041192	SMG5	100	92.647	ENSPPAG00000011996	SMG5	100	92.647	Pan_paniscus
ENSMLEG00000041192	SMG5	98	87.349	ENSPPRG00000011901	SMG5	100	87.349	Panthera_pardus
ENSMLEG00000041192	SMG5	99	79.286	ENSPTIG00000007892	SMG5	98	79.133	Panthera_tigris_altaica
ENSMLEG00000041192	SMG5	100	92.843	ENSPTRG00000023925	SMG5	100	92.843	Pan_troglodytes
ENSMLEG00000041192	SMG5	100	92.843	ENSPTRG00000049282	-	100	92.843	Pan_troglodytes
ENSMLEG00000041192	SMG5	100	93.627	ENSPANG00000011201	SMG5	100	93.627	Papio_anubis
ENSMLEG00000041192	SMG5	99	60.600	ENSPKIG00000009402	smg5	99	60.819	Paramormyrops_kingsleyae
ENSMLEG00000041192	SMG5	98	74.679	ENSPSIG00000015198	SMG5	100	74.334	Pelodiscus_sinensis
ENSMLEG00000041192	SMG5	99	56.710	ENSPMGG00000010465	smg5	99	57.077	Periophthalmus_magnuspinnatus
ENSMLEG00000041192	SMG5	100	86.595	ENSPEMG00000001819	Smg5	100	86.595	Peromyscus_maniculatus_bairdii
ENSMLEG00000041192	SMG5	55	42.059	ENSPEMG00000010022	-	95	40.925	Peromyscus_maniculatus_bairdii
ENSMLEG00000041192	SMG5	98	45.192	ENSPMAG00000000410	smg5	100	45.265	Petromyzon_marinus
ENSMLEG00000041192	SMG5	100	83.366	ENSPCIG00000018938	SMG5	100	83.757	Phascolarctos_cinereus
ENSMLEG00000041192	SMG5	93	66.516	ENSPFOG00000010191	smg5	99	57.156	Poecilia_formosa
ENSMLEG00000041192	SMG5	93	66.516	ENSPLAG00000009332	smg5	99	56.978	Poecilia_latipinna
ENSMLEG00000041192	SMG5	93	66.516	ENSPMEG00000014105	smg5	99	60.000	Poecilia_mexicana
ENSMLEG00000041192	SMG5	93	66.516	ENSPREG00000017713	smg5	99	56.889	Poecilia_reticulata
ENSMLEG00000041192	SMG5	100	93.137	ENSPPYG00000000723	SMG5	100	93.137	Pongo_abelii
ENSMLEG00000041192	SMG5	75	97.790	ENSPCAG00000008412	SMG5	81	97.790	Procavia_capensis
ENSMLEG00000041192	SMG5	100	91.275	ENSPCOG00000004741	SMG5	100	91.275	Propithecus_coquereli
ENSMLEG00000041192	SMG5	93	89.831	ENSPVAG00000016748	SMG5	91	89.831	Pteropus_vampyrus
ENSMLEG00000041192	SMG5	93	65.237	ENSPNYG00000013397	smg5	99	56.173	Pundamilia_nyererei
ENSMLEG00000041192	SMG5	99	57.402	ENSPNAG00000028363	smg5	99	57.828	Pygocentrus_nattereri
ENSMLEG00000041192	SMG5	100	86.497	ENSRNOG00000019590	Smg5	100	86.301	Rattus_norvegicus
ENSMLEG00000041192	SMG5	100	93.333	ENSRBIG00000027428	SMG5	100	93.333	Rhinopithecus_bieti
ENSMLEG00000041192	SMG5	100	93.235	ENSRROG00000030035	SMG5	100	93.235	Rhinopithecus_roxellana
ENSMLEG00000041192	SMG5	100	91.961	ENSSBOG00000033339	SMG5	100	91.961	Saimiri_boliviensis_boliviensis
ENSMLEG00000041192	SMG5	63	36.517	ENSSHAG00000000935	-	82	36.310	Sarcophilus_harrisii
ENSMLEG00000041192	SMG5	99	30.962	ENSSHAG00000009572	-	80	37.685	Sarcophilus_harrisii
ENSMLEG00000041192	SMG5	87	38.182	ENSSHAG00000000561	-	87	38.182	Sarcophilus_harrisii
ENSMLEG00000041192	SMG5	98	82.851	ENSSHAG00000014163	SMG5	100	83.250	Sarcophilus_harrisii
ENSMLEG00000041192	SMG5	99	60.526	ENSSFOG00015024175	smg5	99	61.463	Scleropages_formosus
ENSMLEG00000041192	SMG5	99	55.919	ENSSMAG00000013059	smg5	99	57.587	Scophthalmus_maximus
ENSMLEG00000041192	SMG5	92	66.051	ENSSDUG00000007122	smg5	92	67.290	Seriola_dumerili
ENSMLEG00000041192	SMG5	97	60.498	ENSSLDG00000011418	smg5	92	67.925	Seriola_lalandi_dorsalis
ENSMLEG00000041192	SMG5	90	74.159	ENSSARG00000012484	SMG5	100	74.159	Sorex_araneus
ENSMLEG00000041192	SMG5	95	73.069	ENSSPUG00000002260	SMG5	99	71.777	Sphenodon_punctatus
ENSMLEG00000041192	SMG5	99	60.231	ENSSPAG00000014266	smg5	99	60.115	Stegastes_partitus
ENSMLEG00000041192	SMG5	99	69.608	ENSSSCG00000039308	-	100	69.804	Sus_scrofa
ENSMLEG00000041192	SMG5	100	90.784	ENSSSCG00000006490	-	99	92.275	Sus_scrofa
ENSMLEG00000041192	SMG5	99	74.581	ENSTGUG00000003748	-	100	74.416	Taeniopygia_guttata
ENSMLEG00000041192	SMG5	99	58.500	ENSTRUG00000012580	smg5	99	59.231	Takifugu_rubripes
ENSMLEG00000041192	SMG5	99	60.193	ENSTNIG00000010303	smg5	99	59.961	Tetraodon_nigroviridis
ENSMLEG00000041192	SMG5	61	100.000	ENSTBEG00000002777	SMG5	59	100.000	Tupaia_belangeri
ENSMLEG00000041192	SMG5	100	86.092	ENSTTRG00000001401	SMG5	100	86.092	Tursiops_truncatus
ENSMLEG00000041192	SMG5	100	87.157	ENSUAMG00000013721	SMG5	100	86.569	Ursus_americanus
ENSMLEG00000041192	SMG5	98	82.583	ENSUMAG00000018041	SMG5	97	81.982	Ursus_maritimus
ENSMLEG00000041192	SMG5	97	84.438	ENSVPAG00000009446	SMG5	99	84.438	Vicugna_pacos
ENSMLEG00000041192	SMG5	100	88.039	ENSVVUG00000005887	SMG5	100	88.039	Vulpes_vulpes
ENSMLEG00000041192	SMG5	79	63.990	ENSXETG00000033791	SMG5	99	63.237	Xenopus_tropicalis
ENSMLEG00000041192	SMG5	82	68.108	ENSXCOG00000004379	smg5	95	68.681	Xiphophorus_couchianus
ENSMLEG00000041192	SMG5	99	60.038	ENSXMAG00000013499	smg5	99	60.345	Xiphophorus_maculatus